data_4JPX # _model_server_result.job_id 0dJbQ4Wkw1s-EltnsHLfkQ _model_server_result.datetime_utc '2024-10-18 20:30:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jpx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4JPX # _exptl.entry_id 4JPX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 165.189 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHENYLALANINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 76.66 _cell.angle_beta 73.21 _cell.angle_gamma 85.53 _cell.entry_id 4JPX _cell.length_a 36.989 _cell.length_b 38.569 _cell.length_c 47.871 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JPX _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 143 A HIS 138 1_555 C CO CO . A CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc2 A NE2 HIS 148 A HIS 143 1_555 C CO CO . A CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc3 A OE1 GLU 189 A GLU 184 1_555 C CO CO . A CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc4 A OE2 GLU 189 A GLU 184 1_555 C CO CO . A CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc5 C CO CO . A CO 302 1_555 D O HOH . A HOH 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc6 C CO CO . A CO 302 1_555 D O HOH . A HOH 585 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? # _chem_comp.formula 'C9 H11 N O2' _chem_comp.formula_weight 165.189 _chem_comp.id PHE _chem_comp.mon_nstd_flag y _chem_comp.name PHENYLALANINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA PHE sing 237 n n N H PHE sing 238 n n N H2 PHE sing 239 n n CA C PHE sing 240 n n CA CB PHE sing 241 n n CA HA PHE sing 242 n n C O PHE doub 243 n n C OXT PHE sing 244 n n CB CG PHE sing 245 n n CB HB2 PHE sing 246 n n CB HB3 PHE sing 247 n n CG CD1 PHE doub 248 n y CG CD2 PHE sing 249 n y CD1 CE1 PHE sing 250 n y CD1 HD1 PHE sing 251 n n CD2 CE2 PHE doub 252 n y CD2 HD2 PHE sing 253 n n CE1 CZ PHE doub 254 n y CE1 HE1 PHE sing 255 n n CE2 CZ PHE sing 256 n y CE2 HE2 PHE sing 257 n n CZ HZ PHE sing 258 n n OXT HXT PHE sing 259 n n # _atom_sites.entry_id 4JPX _atom_sites.fract_transf_matrix[1][1] 0.027035 _atom_sites.fract_transf_matrix[1][2] -0.002113 _atom_sites.fract_transf_matrix[1][3] -0.007886 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026007 _atom_sites.fract_transf_matrix[2][3] -0.005813 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022358 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PHE A 1 301 301 PHE PHE . C 3 CO A 1 302 302 CO CO . D 4 HOH A 1 401 401 HOH HOH . D 4 HOH A 2 402 402 HOH HOH . D 4 HOH A 3 403 403 HOH HOH . D 4 HOH A 4 404 404 HOH HOH . D 4 HOH A 5 405 405 HOH HOH . D 4 HOH A 6 406 406 HOH HOH . D 4 HOH A 7 407 407 HOH HOH . D 4 HOH A 8 408 408 HOH HOH . D 4 HOH A 9 409 409 HOH HOH . D 4 HOH A 10 410 410 HOH HOH . D 4 HOH A 11 411 411 HOH HOH . D 4 HOH A 12 412 412 HOH HOH . D 4 HOH A 13 413 413 HOH HOH . D 4 HOH A 14 414 414 HOH HOH . D 4 HOH A 15 415 415 HOH HOH . D 4 HOH A 16 416 416 HOH HOH . D 4 HOH A 17 417 417 HOH HOH . D 4 HOH A 18 418 418 HOH HOH . D 4 HOH A 19 419 419 HOH HOH . D 4 HOH A 20 420 420 HOH HOH . D 4 HOH A 21 421 421 HOH HOH . D 4 HOH A 22 422 422 HOH HOH . D 4 HOH A 23 423 423 HOH HOH . D 4 HOH A 24 424 424 HOH HOH . D 4 HOH A 25 425 425 HOH HOH . D 4 HOH A 26 426 426 HOH HOH . D 4 HOH A 27 427 427 HOH HOH . D 4 HOH A 28 428 428 HOH HOH . D 4 HOH A 29 429 429 HOH HOH . D 4 HOH A 30 430 430 HOH HOH . D 4 HOH A 31 431 431 HOH HOH . D 4 HOH A 32 432 432 HOH HOH . D 4 HOH A 33 433 433 HOH HOH . D 4 HOH A 34 434 434 HOH HOH . D 4 HOH A 35 435 435 HOH HOH . D 4 HOH A 36 436 436 HOH HOH . D 4 HOH A 37 437 437 HOH HOH . D 4 HOH A 38 438 438 HOH HOH . D 4 HOH A 39 439 439 HOH HOH . D 4 HOH A 40 440 440 HOH HOH . D 4 HOH A 41 441 441 HOH HOH . D 4 HOH A 42 442 442 HOH HOH . D 4 HOH A 43 443 443 HOH HOH . D 4 HOH A 44 444 444 HOH HOH . D 4 HOH A 45 445 445 HOH HOH . D 4 HOH A 46 446 446 HOH HOH . D 4 HOH A 47 447 447 HOH HOH . D 4 HOH A 48 448 448 HOH HOH . D 4 HOH A 49 449 449 HOH HOH . D 4 HOH A 50 450 450 HOH HOH . D 4 HOH A 51 451 451 HOH HOH . D 4 HOH A 52 452 452 HOH HOH . D 4 HOH A 53 453 453 HOH HOH . D 4 HOH A 54 454 454 HOH HOH . D 4 HOH A 55 455 455 HOH HOH . D 4 HOH A 56 456 456 HOH HOH . D 4 HOH A 57 457 457 HOH HOH . D 4 HOH A 58 458 458 HOH HOH . D 4 HOH A 59 459 459 HOH HOH . D 4 HOH A 60 460 460 HOH HOH . D 4 HOH A 61 461 461 HOH HOH . D 4 HOH A 62 462 462 HOH HOH . D 4 HOH A 63 463 463 HOH HOH . D 4 HOH A 64 464 464 HOH HOH . D 4 HOH A 65 465 465 HOH HOH . D 4 HOH A 66 466 466 HOH HOH . D 4 HOH A 67 467 467 HOH HOH . D 4 HOH A 68 468 468 HOH HOH . D 4 HOH A 69 469 469 HOH HOH . D 4 HOH A 70 470 470 HOH HOH . D 4 HOH A 71 471 471 HOH HOH . D 4 HOH A 72 472 472 HOH HOH . D 4 HOH A 73 473 473 HOH HOH . D 4 HOH A 74 474 474 HOH HOH . D 4 HOH A 75 475 475 HOH HOH . D 4 HOH A 76 476 476 HOH HOH . D 4 HOH A 77 477 477 HOH HOH . D 4 HOH A 78 478 478 HOH HOH . D 4 HOH A 79 479 479 HOH HOH . D 4 HOH A 80 480 480 HOH HOH . D 4 HOH A 81 481 481 HOH HOH . D 4 HOH A 82 482 483 HOH HOH . D 4 HOH A 83 483 484 HOH HOH . D 4 HOH A 84 484 485 HOH HOH . D 4 HOH A 85 485 486 HOH HOH . D 4 HOH A 86 486 487 HOH HOH . D 4 HOH A 87 487 488 HOH HOH . D 4 HOH A 88 488 489 HOH HOH . D 4 HOH A 89 489 490 HOH HOH . D 4 HOH A 90 490 491 HOH HOH . D 4 HOH A 91 491 492 HOH HOH . D 4 HOH A 92 492 493 HOH HOH . D 4 HOH A 93 493 494 HOH HOH . D 4 HOH A 94 494 495 HOH HOH . D 4 HOH A 95 495 496 HOH HOH . D 4 HOH A 96 496 497 HOH HOH . D 4 HOH A 97 497 498 HOH HOH . D 4 HOH A 98 498 500 HOH HOH . D 4 HOH A 99 499 501 HOH HOH . D 4 HOH A 100 500 502 HOH HOH . D 4 HOH A 101 501 503 HOH HOH . D 4 HOH A 102 502 504 HOH HOH . D 4 HOH A 103 503 505 HOH HOH . D 4 HOH A 104 504 506 HOH HOH . D 4 HOH A 105 505 507 HOH HOH . D 4 HOH A 106 506 508 HOH HOH . D 4 HOH A 107 507 509 HOH HOH . D 4 HOH A 108 508 510 HOH HOH . D 4 HOH A 109 509 511 HOH HOH . D 4 HOH A 110 510 512 HOH HOH . D 4 HOH A 111 511 513 HOH HOH . D 4 HOH A 112 512 514 HOH HOH . D 4 HOH A 113 513 515 HOH HOH . D 4 HOH A 114 514 516 HOH HOH . D 4 HOH A 115 515 517 HOH HOH . D 4 HOH A 116 516 518 HOH HOH . D 4 HOH A 117 517 519 HOH HOH . D 4 HOH A 118 518 520 HOH HOH . D 4 HOH A 119 519 521 HOH HOH . D 4 HOH A 120 520 523 HOH HOH . D 4 HOH A 121 521 524 HOH HOH . D 4 HOH A 122 522 525 HOH HOH . D 4 HOH A 123 523 526 HOH HOH . D 4 HOH A 124 524 527 HOH HOH . D 4 HOH A 125 525 528 HOH HOH . D 4 HOH A 126 526 529 HOH HOH . D 4 HOH A 127 527 530 HOH HOH . D 4 HOH A 128 528 532 HOH HOH . D 4 HOH A 129 529 535 HOH HOH . D 4 HOH A 130 530 537 HOH HOH . D 4 HOH A 131 531 538 HOH HOH . D 4 HOH A 132 532 539 HOH HOH . D 4 HOH A 133 533 540 HOH HOH . D 4 HOH A 134 534 541 HOH HOH . D 4 HOH A 135 535 542 HOH HOH . D 4 HOH A 136 536 543 HOH HOH . D 4 HOH A 137 537 544 HOH HOH . D 4 HOH A 138 538 545 HOH HOH . D 4 HOH A 139 539 546 HOH HOH . D 4 HOH A 140 540 547 HOH HOH . D 4 HOH A 141 541 548 HOH HOH . D 4 HOH A 142 542 549 HOH HOH . D 4 HOH A 143 543 550 HOH HOH . D 4 HOH A 144 544 551 HOH HOH . D 4 HOH A 145 545 552 HOH HOH . D 4 HOH A 146 546 553 HOH HOH . D 4 HOH A 147 547 554 HOH HOH . D 4 HOH A 148 548 555 HOH HOH . D 4 HOH A 149 549 556 HOH HOH . D 4 HOH A 150 550 557 HOH HOH . D 4 HOH A 151 551 558 HOH HOH . D 4 HOH A 152 552 559 HOH HOH . D 4 HOH A 153 553 560 HOH HOH . D 4 HOH A 154 554 561 HOH HOH . D 4 HOH A 155 555 562 HOH HOH . D 4 HOH A 156 556 563 HOH HOH . D 4 HOH A 157 557 564 HOH HOH . D 4 HOH A 158 558 565 HOH HOH . D 4 HOH A 159 559 566 HOH HOH . D 4 HOH A 160 560 567 HOH HOH . D 4 HOH A 161 561 568 HOH HOH . D 4 HOH A 162 562 569 HOH HOH . D 4 HOH A 163 563 570 HOH HOH . D 4 HOH A 164 564 571 HOH HOH . D 4 HOH A 165 565 572 HOH HOH . D 4 HOH A 166 566 573 HOH HOH . D 4 HOH A 167 567 574 HOH HOH . D 4 HOH A 168 568 575 HOH HOH . D 4 HOH A 169 569 576 HOH HOH . D 4 HOH A 170 570 577 HOH HOH . D 4 HOH A 171 571 578 HOH HOH . D 4 HOH A 172 572 579 HOH HOH . D 4 HOH A 173 573 580 HOH HOH . D 4 HOH A 174 574 581 HOH HOH . D 4 HOH A 175 575 582 HOH HOH . D 4 HOH A 176 576 583 HOH HOH . D 4 HOH A 177 577 584 HOH HOH . D 4 HOH A 178 578 585 HOH HOH . D 4 HOH A 179 579 586 HOH HOH . D 4 HOH A 180 580 587 HOH HOH . D 4 HOH A 181 581 588 HOH HOH . D 4 HOH A 182 582 589 HOH HOH . D 4 HOH A 183 583 590 HOH HOH . D 4 HOH A 184 584 591 HOH HOH . D 4 HOH A 185 585 592 HOH HOH . D 4 HOH A 186 586 593 HOH HOH . D 4 HOH A 187 587 594 HOH HOH . D 4 HOH A 188 588 595 HOH HOH . D 4 HOH A 189 589 596 HOH HOH . D 4 HOH A 190 590 597 HOH HOH . D 4 HOH A 191 591 598 HOH HOH . D 4 HOH A 192 592 599 HOH HOH . D 4 HOH A 193 593 600 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N PHE . . . B 2 5.16 -7.93 -16.948 1 18.77 ? N PHE 301 A 1 HETATM 2 C CA PHE . . . B 2 6.31 -7.663 -16.082 1 18.85 ? CA PHE 301 A 1 HETATM 3 C C PHE . . . B 2 7.595 -8.256 -16.644 1 20.1 ? C PHE 301 A 1 HETATM 4 O O PHE . . . B 2 7.678 -8.604 -17.816 1 24.1 ? O PHE 301 A 1 HETATM 5 C CB PHE . . . B 2 6.051 -8.18 -14.662 1 17.66 ? CB PHE 301 A 1 HETATM 6 C CG PHE . . . B 2 5.114 -7.312 -13.878 1 16.51 ? CG PHE 301 A 1 HETATM 7 C CD1 PHE . . . B 2 5.547 -6.098 -13.344 1 17.56 ? CD1 PHE 301 A 1 HETATM 8 C CD2 PHE . . . B 2 3.799 -7.682 -13.697 1 15.99 ? CD2 PHE 301 A 1 HETATM 9 C CE1 PHE . . . B 2 4.677 -5.291 -12.628 1 17.85 ? CE1 PHE 301 A 1 HETATM 10 C CE2 PHE . . . B 2 2.924 -6.876 -12.984 1 16.32 ? CE2 PHE 301 A 1 HETATM 11 C CZ PHE . . . B 2 3.358 -5.68 -12.452 1 17.2 ? CZ PHE 301 A 1 HETATM 12 O OXT PHE . . . B 2 8.595 -8.394 -15.952 1 25.34 ? OXT PHE 301 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #