data_4JQ1 # _model_server_result.job_id lbtsBKfCQCX1ovhmeUDF8A _model_server_result.datetime_utc '2024-11-24 05:23:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jq1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":403}' # _entry.id 4JQ1 # _exptl.entry_id 4JQ1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4JQ1 _cell.length_a 142.519 _cell.length_b 142.519 _cell.length_c 205.773 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JQ1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1 B,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 I N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 4JQ1 _atom_sites.fract_transf_matrix[1][1] 0.007017 _atom_sites.fract_transf_matrix[1][2] 0.004051 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008102 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00486 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NPS A 1 401 401 NPS NPS . D 3 NAP A 1 402 501 NAP NAP . E 4 EDO A 1 403 1 EDO EDO . F 5 TLA A 1 404 3 TLA TLA . G 2 NPS B 1 401 401 NPS NPS . H 3 NAP B 1 402 501 NAP NAP . I 4 EDO B 1 403 2 EDO EDO . J 6 PO4 B 1 404 4 PO4 PO4 . K 7 HOH A 1 501 11 HOH HOH . K 7 HOH A 2 502 15 HOH HOH . K 7 HOH A 3 503 19 HOH HOH . K 7 HOH A 4 504 20 HOH HOH . K 7 HOH A 5 505 21 HOH HOH . K 7 HOH A 6 506 23 HOH HOH . K 7 HOH A 7 507 25 HOH HOH . K 7 HOH A 8 508 26 HOH HOH . K 7 HOH A 9 509 28 HOH HOH . K 7 HOH A 10 510 32 HOH HOH . K 7 HOH A 11 511 36 HOH HOH . K 7 HOH A 12 512 37 HOH HOH . K 7 HOH A 13 513 40 HOH HOH . K 7 HOH A 14 514 42 HOH HOH . K 7 HOH A 15 515 43 HOH HOH . K 7 HOH A 16 516 44 HOH HOH . K 7 HOH A 17 517 45 HOH HOH . K 7 HOH A 18 518 46 HOH HOH . K 7 HOH A 19 519 47 HOH HOH . K 7 HOH A 20 520 50 HOH HOH . K 7 HOH A 21 521 51 HOH HOH . K 7 HOH A 22 522 56 HOH HOH . K 7 HOH A 23 523 57 HOH HOH . K 7 HOH A 24 524 58 HOH HOH . K 7 HOH A 25 525 61 HOH HOH . K 7 HOH A 26 526 62 HOH HOH . K 7 HOH A 27 527 65 HOH HOH . K 7 HOH A 28 528 66 HOH HOH . K 7 HOH A 29 529 68 HOH HOH . K 7 HOH A 30 530 70 HOH HOH . K 7 HOH A 31 531 74 HOH HOH . K 7 HOH A 32 532 75 HOH HOH . K 7 HOH A 33 533 76 HOH HOH . K 7 HOH A 34 534 77 HOH HOH . K 7 HOH A 35 535 80 HOH HOH . K 7 HOH A 36 536 81 HOH HOH . K 7 HOH A 37 537 84 HOH HOH . K 7 HOH A 38 538 88 HOH HOH . K 7 HOH A 39 539 89 HOH HOH . K 7 HOH A 40 540 90 HOH HOH . K 7 HOH A 41 541 91 HOH HOH . K 7 HOH A 42 542 96 HOH HOH . K 7 HOH A 43 543 97 HOH HOH . K 7 HOH A 44 544 98 HOH HOH . K 7 HOH A 45 545 100 HOH HOH . K 7 HOH A 46 546 102 HOH HOH . K 7 HOH A 47 547 104 HOH HOH . K 7 HOH A 48 548 106 HOH HOH . K 7 HOH A 49 549 107 HOH HOH . K 7 HOH A 50 550 108 HOH HOH . K 7 HOH A 51 551 109 HOH HOH . K 7 HOH A 52 552 110 HOH HOH . K 7 HOH A 53 553 111 HOH HOH . K 7 HOH A 54 554 112 HOH HOH . K 7 HOH A 55 555 114 HOH HOH . K 7 HOH A 56 556 115 HOH HOH . K 7 HOH A 57 557 116 HOH HOH . K 7 HOH A 58 558 117 HOH HOH . K 7 HOH A 59 559 118 HOH HOH . K 7 HOH A 60 560 120 HOH HOH . K 7 HOH A 61 561 122 HOH HOH . K 7 HOH A 62 562 124 HOH HOH . K 7 HOH A 63 563 125 HOH HOH . K 7 HOH A 64 564 127 HOH HOH . K 7 HOH A 65 565 129 HOH HOH . K 7 HOH A 66 566 132 HOH HOH . K 7 HOH A 67 567 133 HOH HOH . K 7 HOH A 68 568 134 HOH HOH . K 7 HOH A 69 569 135 HOH HOH . K 7 HOH A 70 570 136 HOH HOH . K 7 HOH A 71 571 138 HOH HOH . K 7 HOH A 72 572 141 HOH HOH . K 7 HOH A 73 573 143 HOH HOH . K 7 HOH A 74 574 144 HOH HOH . K 7 HOH A 75 575 145 HOH HOH . K 7 HOH A 76 576 146 HOH HOH . K 7 HOH A 77 577 147 HOH HOH . K 7 HOH A 78 578 148 HOH HOH . K 7 HOH A 79 579 151 HOH HOH . K 7 HOH A 80 580 153 HOH HOH . K 7 HOH A 81 581 154 HOH HOH . K 7 HOH A 82 582 159 HOH HOH . K 7 HOH A 83 583 162 HOH HOH . K 7 HOH A 84 584 164 HOH HOH . K 7 HOH A 85 585 165 HOH HOH . K 7 HOH A 86 586 166 HOH HOH . K 7 HOH A 87 587 167 HOH HOH . K 7 HOH A 88 588 168 HOH HOH . K 7 HOH A 89 589 169 HOH HOH . K 7 HOH A 90 590 172 HOH HOH . K 7 HOH A 91 591 173 HOH HOH . K 7 HOH A 92 592 174 HOH HOH . K 7 HOH A 93 593 176 HOH HOH . K 7 HOH A 94 594 177 HOH HOH . K 7 HOH A 95 595 178 HOH HOH . K 7 HOH A 96 596 179 HOH HOH . K 7 HOH A 97 597 181 HOH HOH . K 7 HOH A 98 598 183 HOH HOH . K 7 HOH A 99 599 185 HOH HOH . K 7 HOH A 100 600 186 HOH HOH . K 7 HOH A 101 601 188 HOH HOH . K 7 HOH A 102 602 189 HOH HOH . K 7 HOH A 103 603 190 HOH HOH . K 7 HOH A 104 604 192 HOH HOH . K 7 HOH A 105 605 194 HOH HOH . K 7 HOH A 106 606 195 HOH HOH . K 7 HOH A 107 607 196 HOH HOH . K 7 HOH A 108 608 200 HOH HOH . K 7 HOH A 109 609 201 HOH HOH . K 7 HOH A 110 610 202 HOH HOH . K 7 HOH A 111 611 207 HOH HOH . K 7 HOH A 112 612 208 HOH HOH . K 7 HOH A 113 613 209 HOH HOH . K 7 HOH A 114 614 211 HOH HOH . K 7 HOH A 115 615 212 HOH HOH . K 7 HOH A 116 616 213 HOH HOH . K 7 HOH A 117 617 214 HOH HOH . K 7 HOH A 118 618 215 HOH HOH . K 7 HOH A 119 619 217 HOH HOH . K 7 HOH A 120 620 218 HOH HOH . K 7 HOH A 121 621 223 HOH HOH . K 7 HOH A 122 622 225 HOH HOH . K 7 HOH A 123 623 227 HOH HOH . K 7 HOH A 124 624 230 HOH HOH . K 7 HOH A 125 625 231 HOH HOH . K 7 HOH A 126 626 233 HOH HOH . K 7 HOH A 127 627 234 HOH HOH . K 7 HOH A 128 628 236 HOH HOH . K 7 HOH A 129 629 238 HOH HOH . K 7 HOH A 130 630 240 HOH HOH . K 7 HOH A 131 631 241 HOH HOH . K 7 HOH A 132 632 244 HOH HOH . K 7 HOH A 133 633 245 HOH HOH . K 7 HOH A 134 634 246 HOH HOH . K 7 HOH A 135 635 247 HOH HOH . K 7 HOH A 136 636 248 HOH HOH . K 7 HOH A 137 637 249 HOH HOH . K 7 HOH A 138 638 253 HOH HOH . K 7 HOH A 139 639 254 HOH HOH . K 7 HOH A 140 640 255 HOH HOH . K 7 HOH A 141 641 258 HOH HOH . K 7 HOH A 142 642 259 HOH HOH . K 7 HOH A 143 643 261 HOH HOH . K 7 HOH A 144 644 265 HOH HOH . K 7 HOH A 145 645 266 HOH HOH . K 7 HOH A 146 646 268 HOH HOH . K 7 HOH A 147 647 271 HOH HOH . K 7 HOH A 148 648 272 HOH HOH . K 7 HOH A 149 649 274 HOH HOH . K 7 HOH A 150 650 275 HOH HOH . K 7 HOH A 151 651 277 HOH HOH . K 7 HOH A 152 652 278 HOH HOH . K 7 HOH A 153 653 280 HOH HOH . K 7 HOH A 154 654 281 HOH HOH . K 7 HOH A 155 655 282 HOH HOH . K 7 HOH A 156 656 284 HOH HOH . K 7 HOH A 157 657 285 HOH HOH . K 7 HOH A 158 658 286 HOH HOH . K 7 HOH A 159 659 287 HOH HOH . K 7 HOH A 160 660 289 HOH HOH . K 7 HOH A 161 661 290 HOH HOH . K 7 HOH A 162 662 291 HOH HOH . K 7 HOH A 163 663 294 HOH HOH . K 7 HOH A 164 664 299 HOH HOH . K 7 HOH A 165 665 300 HOH HOH . K 7 HOH A 166 666 301 HOH HOH . K 7 HOH A 167 667 306 HOH HOH . K 7 HOH A 168 668 307 HOH HOH . K 7 HOH A 169 669 308 HOH HOH . K 7 HOH A 170 670 309 HOH HOH . K 7 HOH A 171 671 310 HOH HOH . K 7 HOH A 172 672 311 HOH HOH . K 7 HOH A 173 673 313 HOH HOH . K 7 HOH A 174 674 314 HOH HOH . K 7 HOH A 175 675 315 HOH HOH . L 7 HOH B 1 501 1 HOH HOH . L 7 HOH B 2 502 2 HOH HOH . L 7 HOH B 3 503 3 HOH HOH . L 7 HOH B 4 504 4 HOH HOH . L 7 HOH B 5 505 5 HOH HOH . L 7 HOH B 6 506 6 HOH HOH . L 7 HOH B 7 507 7 HOH HOH . L 7 HOH B 8 508 8 HOH HOH . L 7 HOH B 9 509 9 HOH HOH . L 7 HOH B 10 510 10 HOH HOH . L 7 HOH B 11 511 12 HOH HOH . L 7 HOH B 12 512 13 HOH HOH . L 7 HOH B 13 513 16 HOH HOH . L 7 HOH B 14 514 17 HOH HOH . L 7 HOH B 15 515 18 HOH HOH . L 7 HOH B 16 516 22 HOH HOH . L 7 HOH B 17 517 24 HOH HOH . L 7 HOH B 18 518 27 HOH HOH . L 7 HOH B 19 519 29 HOH HOH . L 7 HOH B 20 520 30 HOH HOH . L 7 HOH B 21 521 31 HOH HOH . L 7 HOH B 22 522 33 HOH HOH . L 7 HOH B 23 523 34 HOH HOH . L 7 HOH B 24 524 35 HOH HOH . L 7 HOH B 25 525 38 HOH HOH . L 7 HOH B 26 526 39 HOH HOH . L 7 HOH B 27 527 41 HOH HOH . L 7 HOH B 28 528 48 HOH HOH . L 7 HOH B 29 529 49 HOH HOH . L 7 HOH B 30 530 52 HOH HOH . L 7 HOH B 31 531 53 HOH HOH . L 7 HOH B 32 532 54 HOH HOH . L 7 HOH B 33 533 55 HOH HOH . L 7 HOH B 34 534 59 HOH HOH . L 7 HOH B 35 535 60 HOH HOH . L 7 HOH B 36 536 63 HOH HOH . L 7 HOH B 37 537 67 HOH HOH . L 7 HOH B 38 538 69 HOH HOH . L 7 HOH B 39 539 71 HOH HOH . L 7 HOH B 40 540 72 HOH HOH . L 7 HOH B 41 541 73 HOH HOH . L 7 HOH B 42 542 78 HOH HOH . L 7 HOH B 43 543 79 HOH HOH . L 7 HOH B 44 544 82 HOH HOH . L 7 HOH B 45 545 83 HOH HOH . L 7 HOH B 46 546 85 HOH HOH . L 7 HOH B 47 547 86 HOH HOH . L 7 HOH B 48 548 87 HOH HOH . L 7 HOH B 49 549 92 HOH HOH . L 7 HOH B 50 550 93 HOH HOH . L 7 HOH B 51 551 94 HOH HOH . L 7 HOH B 52 552 95 HOH HOH . L 7 HOH B 53 553 99 HOH HOH . L 7 HOH B 54 554 101 HOH HOH . L 7 HOH B 55 555 103 HOH HOH . L 7 HOH B 56 556 105 HOH HOH . L 7 HOH B 57 557 113 HOH HOH . L 7 HOH B 58 558 119 HOH HOH . L 7 HOH B 59 559 121 HOH HOH . L 7 HOH B 60 560 123 HOH HOH . L 7 HOH B 61 561 126 HOH HOH . L 7 HOH B 62 562 128 HOH HOH . L 7 HOH B 63 563 130 HOH HOH . L 7 HOH B 64 564 131 HOH HOH . L 7 HOH B 65 565 137 HOH HOH . L 7 HOH B 66 566 139 HOH HOH . L 7 HOH B 67 567 140 HOH HOH . L 7 HOH B 68 568 142 HOH HOH . L 7 HOH B 69 569 149 HOH HOH . L 7 HOH B 70 570 150 HOH HOH . L 7 HOH B 71 571 152 HOH HOH . L 7 HOH B 72 572 155 HOH HOH . L 7 HOH B 73 573 156 HOH HOH . L 7 HOH B 74 574 157 HOH HOH . L 7 HOH B 75 575 158 HOH HOH . L 7 HOH B 76 576 160 HOH HOH . L 7 HOH B 77 577 161 HOH HOH . L 7 HOH B 78 578 163 HOH HOH . L 7 HOH B 79 579 170 HOH HOH . L 7 HOH B 80 580 171 HOH HOH . L 7 HOH B 81 581 180 HOH HOH . L 7 HOH B 82 582 182 HOH HOH . L 7 HOH B 83 583 184 HOH HOH . L 7 HOH B 84 584 187 HOH HOH . L 7 HOH B 85 585 191 HOH HOH . L 7 HOH B 86 586 193 HOH HOH . L 7 HOH B 87 587 197 HOH HOH . L 7 HOH B 88 588 199 HOH HOH . L 7 HOH B 89 589 203 HOH HOH . L 7 HOH B 90 590 204 HOH HOH . L 7 HOH B 91 591 205 HOH HOH . L 7 HOH B 92 592 206 HOH HOH . L 7 HOH B 93 593 210 HOH HOH . L 7 HOH B 94 594 216 HOH HOH . L 7 HOH B 95 595 219 HOH HOH . L 7 HOH B 96 596 220 HOH HOH . L 7 HOH B 97 597 221 HOH HOH . L 7 HOH B 98 598 222 HOH HOH . L 7 HOH B 99 599 224 HOH HOH . L 7 HOH B 100 600 226 HOH HOH . L 7 HOH B 101 601 228 HOH HOH . L 7 HOH B 102 602 229 HOH HOH . L 7 HOH B 103 603 232 HOH HOH . L 7 HOH B 104 604 235 HOH HOH . L 7 HOH B 105 605 237 HOH HOH . L 7 HOH B 106 606 239 HOH HOH . L 7 HOH B 107 607 242 HOH HOH . L 7 HOH B 108 608 243 HOH HOH . L 7 HOH B 109 609 250 HOH HOH . L 7 HOH B 110 610 251 HOH HOH . L 7 HOH B 111 611 252 HOH HOH . L 7 HOH B 112 612 256 HOH HOH . L 7 HOH B 113 613 257 HOH HOH . L 7 HOH B 114 614 260 HOH HOH . L 7 HOH B 115 615 262 HOH HOH . L 7 HOH B 116 616 263 HOH HOH . L 7 HOH B 117 617 264 HOH HOH . L 7 HOH B 118 618 267 HOH HOH . L 7 HOH B 119 619 269 HOH HOH . L 7 HOH B 120 620 270 HOH HOH . L 7 HOH B 121 621 273 HOH HOH . L 7 HOH B 122 622 276 HOH HOH . L 7 HOH B 123 623 279 HOH HOH . L 7 HOH B 124 624 283 HOH HOH . L 7 HOH B 125 625 288 HOH HOH . L 7 HOH B 126 626 292 HOH HOH . L 7 HOH B 127 627 293 HOH HOH . L 7 HOH B 128 628 296 HOH HOH . L 7 HOH B 129 629 297 HOH HOH . L 7 HOH B 130 630 298 HOH HOH . L 7 HOH B 131 631 302 HOH HOH . L 7 HOH B 132 632 303 HOH HOH . L 7 HOH B 133 633 304 HOH HOH . L 7 HOH B 134 634 305 HOH HOH . L 7 HOH B 135 635 312 HOH HOH . L 7 HOH B 136 636 316 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . I 4 -80.929 159.986 239.789 1 29.63 ? C1 EDO 403 B 1 HETATM 2 O O1 EDO . . . I 4 -80.619 158.779 240.499 1 27.3 ? O1 EDO 403 B 1 HETATM 3 C C2 EDO . . . I 4 -80.527 159.837 238.326 1 29.67 ? C2 EDO 403 B 1 HETATM 4 O O2 EDO . . . I 4 -79.166 159.514 238.298 1 26.83 ? O2 EDO 403 B 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #