data_4JQC
#
_model_server_result.job_id            '_h-sqFQoBh6T_AJ3VGWF0w' 
_model_server_result.datetime_utc      '2024-12-03 20:12:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4jqc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":302}' 
#
_entry.id    4JQC 
#
_exptl.entry_id    4JQC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              377.436 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-methyl-N-[(3-methyl-1-benzofuran-2-yl)methyl]-3-(7-oxo-5,6,7,8-tetrahydro-1,8-naphthyridin-3-yl)propanamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4JQC 
_cell.length_a            79.77 
_cell.length_b            79.77 
_cell.length_c            324.528 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4JQC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
_chem_comp.formula           'C22 H23 N3 O3' 
_chem_comp.formula_weight    377.436 
_chem_comp.id                0WE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-methyl-N-[(3-methyl-1-benzofuran-2-yl)methyl]-3-(7-oxo-5,6,7,8-tetrahydro-1,8-naphthyridin-3-yl)propanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C38 C7 0WE sing 1 n n 
C4 N3 0WE sing 2 n n 
C11 C8 0WE doub 3 n y 
C11 C12 0WE sing 4 n y 
C7 C8 0WE sing 5 n y 
C7 C6 0WE doub 6 n y 
C8 C9 0WE sing 7 n y 
C12 C13 0WE doub 8 n y 
C5 C6 0WE sing 9 n n 
C5 N3 0WE sing 10 n n 
C6 O10 0WE sing 11 n y 
N3 C1 0WE sing 12 n n 
C9 O10 0WE sing 13 n y 
C9 C14 0WE doub 14 n y 
C13 C14 0WE sing 15 n y 
O2 C1 0WE doub 16 n n 
C1 C17 0WE sing 17 n n 
C17 C18 0WE sing 18 n n 
C18 C19 0WE sing 19 n n 
C19 C24 0WE doub 20 n y 
C19 C20 0WE sing 21 n y 
C24 C23 0WE sing 22 n y 
C20 N21 0WE doub 23 n y 
C23 C26 0WE sing 24 n n 
C23 C22 0WE doub 25 n y 
C26 C25 0WE sing 26 n n 
N21 C22 0WE sing 27 n y 
C22 N36 0WE sing 28 n n 
C25 C37 0WE sing 29 n n 
N36 C37 0WE sing 30 n n 
C37 O28 0WE doub 31 n n 
C17 H1 0WE sing 32 n n 
C17 H2 0WE sing 33 n n 
C18 H3 0WE sing 34 n n 
C18 H4 0WE sing 35 n n 
C24 H5 0WE sing 36 n n 
C26 H6 0WE sing 37 n n 
C26 H7 0WE sing 38 n n 
C25 H8 0WE sing 39 n n 
C25 H9 0WE sing 40 n n 
C20 H10 0WE sing 41 n n 
N36 H11 0WE sing 42 n n 
C4 H12 0WE sing 43 n n 
C4 H13 0WE sing 44 n n 
C4 H14 0WE sing 45 n n 
C5 H15 0WE sing 46 n n 
C5 H16 0WE sing 47 n n 
C38 H17 0WE sing 48 n n 
C38 H18 0WE sing 49 n n 
C38 H19 0WE sing 50 n n 
C14 H20 0WE sing 51 n n 
C13 H21 0WE sing 52 n n 
C12 H22 0WE sing 53 n n 
C11 H23 0WE sing 54 n n 
#
_atom_sites.entry_id                     4JQC 
_atom_sites.fract_transf_matrix[1][1]    0.012536 
_atom_sites.fract_transf_matrix[1][2]    0.007238 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014475 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003081 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAD A 1 301 503 NAD NAD . 
D 3 0WE A 1 302 1 0WE LIG . 
E 2 NAD B 1 301 503 NAD NAD . 
F 3 0WE B 1 302 1 0WE LIG . 
G 4 HOH A 1 401 8 HOH HOH . 
G 4 HOH A 2 402 15 HOH HOH . 
G 4 HOH A 3 403 17 HOH HOH . 
G 4 HOH A 4 404 24 HOH HOH . 
G 4 HOH A 5 405 25 HOH HOH . 
G 4 HOH A 6 406 65 HOH HOH . 
G 4 HOH A 7 407 94 HOH HOH . 
G 4 HOH A 8 408 99 HOH HOH . 
G 4 HOH A 9 409 112 HOH HOH . 
G 4 HOH A 10 410 121 HOH HOH . 
G 4 HOH A 11 411 124 HOH HOH . 
H 4 HOH B 1 401 5 HOH HOH . 
H 4 HOH B 2 402 7 HOH HOH . 
H 4 HOH B 3 403 16 HOH HOH . 
H 4 HOH B 4 404 19 HOH HOH . 
H 4 HOH B 5 405 26 HOH HOH . 
H 4 HOH B 6 406 38 HOH HOH . 
H 4 HOH B 7 407 49 HOH HOH . 
H 4 HOH B 8 408 68 HOH HOH . 
H 4 HOH B 9 409 77 HOH HOH . 
H 4 HOH B 10 410 84 HOH HOH . 
H 4 HOH B 11 411 107 HOH HOH . 
H 4 HOH B 12 412 109 HOH HOH . 
H 4 HOH B 13 413 110 HOH HOH . 
H 4 HOH B 14 414 122 HOH HOH . 
H 4 HOH B 15 415 125 HOH HOH . 
H 4 HOH B 16 416 127 HOH HOH . 
H 4 HOH B 17 417 128 HOH HOH . 
H 4 HOH B 18 418 129 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O2 0WE . . . D 3 -1.602 23.545 27.469 1 39.56 ? O2 0WE 302 A 1 
HETATM 2 C C1 0WE . . . D 3 -1.582 22.741 28.405 1 39.4 ? C1 0WE 302 A 1 
HETATM 3 C C17 0WE . . . D 3 -0.862 21.472 28.33 1 39.64 ? C17 0WE 302 A 1 
HETATM 4 C C18 0WE . . . D 3 -0.191 21.144 27.21 1 40.04 ? C18 0WE 302 A 1 
HETATM 5 C C19 0WE . . . D 3 0.591 19.915 27.009 1 40.1 ? C19 0WE 302 A 1 
HETATM 6 C C24 0WE . . . D 3 0.755 18.916 27.996 1 40.09 ? C24 0WE 302 A 1 
HETATM 7 C C23 0WE . . . D 3 1.524 17.775 27.7 1 40.21 ? C23 0WE 302 A 1 
HETATM 8 C C26 0WE . . . D 3 1.735 16.664 28.649 1 40.25 ? C26 0WE 302 A 1 
HETATM 9 C C25 0WE . . . D 3 2.445 15.571 28.269 1 40.33 ? C25 0WE 302 A 1 
HETATM 10 C C20 0WE . . . D 3 1.217 19.716 25.768 1 40.27 ? C20 0WE 302 A 1 
HETATM 11 N N21 0WE . . . D 3 1.954 18.629 25.476 1 40.36 ? N21 0WE 302 A 1 
HETATM 12 C C22 0WE . . . D 3 2.101 17.676 26.418 1 40.32 ? C22 0WE 302 A 1 
HETATM 13 N N36 0WE . . . D 3 2.853 16.531 26.119 1 40.22 ? N36 0WE 302 A 1 
HETATM 14 C C37 0WE . . . D 3 3.066 15.487 26.941 1 40.17 ? C37 0WE 302 A 1 
HETATM 15 O O28 0WE . . . D 3 3.759 14.541 26.568 1 40.32 ? O28 0WE 302 A 1 
HETATM 16 N N3 0WE . . . D 3 -2.231 23.012 29.565 1 38.75 ? N3 0WE 302 A 1 
HETATM 17 C C4 0WE . . . D 3 -2.933 24.294 29.704 1 38.72 ? C4 0WE 302 A 1 
HETATM 18 C C5 0WE . . . D 3 -2.206 22.19 30.781 1 38.33 ? C5 0WE 302 A 1 
HETATM 19 C C6 0WE . . . D 3 -0.996 22.522 31.584 1 38.22 ? C6 0WE 302 A 1 
HETATM 20 O O10 0WE . . . D 3 0.206 21.992 31.183 1 38.15 ? O10 0WE 302 A 1 
HETATM 21 C C9 0WE . . . D 3 1.187 22.694 31.853 1 38.1 ? C9 0WE 302 A 1 
HETATM 22 C C8 0WE . . . D 3 0.573 23.655 32.691 1 38.1 ? C8 0WE 302 A 1 
HETATM 23 C C7 0WE . . . D 3 -0.838 23.503 32.535 1 38.04 ? C7 0WE 302 A 1 
HETATM 24 C C38 0WE . . . D 3 -1.904 24.32 33.204 1 37.81 ? C38 0WE 302 A 1 
HETATM 25 C C14 0WE . . . D 3 2.578 22.528 31.779 1 37.97 ? C14 0WE 302 A 1 
HETATM 26 C C13 0WE . . . D 3 3.393 23.343 32.591 1 38.07 ? C13 0WE 302 A 1 
HETATM 27 C C12 0WE . . . D 3 2.809 24.323 33.421 1 38.06 ? C12 0WE 302 A 1 
HETATM 28 C C11 0WE . . . D 3 1.411 24.49 33.453 1 38.13 ? C11 0WE 302 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           28 
#