data_4JQC # _model_server_result.job_id DMlCJPTPj2nSWb0fP5dz2Q _model_server_result.datetime_utc '2024-12-03 19:36:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jqc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":302}' # _entry.id 4JQC # _exptl.entry_id 4JQC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 377.436 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-methyl-N-[(3-methyl-1-benzofuran-2-yl)methyl]-3-(7-oxo-5,6,7,8-tetrahydro-1,8-naphthyridin-3-yl)propanamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4JQC _cell.length_a 79.77 _cell.length_b 79.77 _cell.length_c 324.528 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JQC _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C22 H23 N3 O3' _chem_comp.formula_weight 377.436 _chem_comp.id 0WE _chem_comp.mon_nstd_flag . _chem_comp.name N-methyl-N-[(3-methyl-1-benzofuran-2-yl)methyl]-3-(7-oxo-5,6,7,8-tetrahydro-1,8-naphthyridin-3-yl)propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C38 C7 0WE sing 1 n n C4 N3 0WE sing 2 n n C11 C8 0WE doub 3 n y C11 C12 0WE sing 4 n y C7 C8 0WE sing 5 n y C7 C6 0WE doub 6 n y C8 C9 0WE sing 7 n y C12 C13 0WE doub 8 n y C5 C6 0WE sing 9 n n C5 N3 0WE sing 10 n n C6 O10 0WE sing 11 n y N3 C1 0WE sing 12 n n C9 O10 0WE sing 13 n y C9 C14 0WE doub 14 n y C13 C14 0WE sing 15 n y O2 C1 0WE doub 16 n n C1 C17 0WE sing 17 n n C17 C18 0WE sing 18 n n C18 C19 0WE sing 19 n n C19 C24 0WE doub 20 n y C19 C20 0WE sing 21 n y C24 C23 0WE sing 22 n y C20 N21 0WE doub 23 n y C23 C26 0WE sing 24 n n C23 C22 0WE doub 25 n y C26 C25 0WE sing 26 n n N21 C22 0WE sing 27 n y C22 N36 0WE sing 28 n n C25 C37 0WE sing 29 n n N36 C37 0WE sing 30 n n C37 O28 0WE doub 31 n n C17 H1 0WE sing 32 n n C17 H2 0WE sing 33 n n C18 H3 0WE sing 34 n n C18 H4 0WE sing 35 n n C24 H5 0WE sing 36 n n C26 H6 0WE sing 37 n n C26 H7 0WE sing 38 n n C25 H8 0WE sing 39 n n C25 H9 0WE sing 40 n n C20 H10 0WE sing 41 n n N36 H11 0WE sing 42 n n C4 H12 0WE sing 43 n n C4 H13 0WE sing 44 n n C4 H14 0WE sing 45 n n C5 H15 0WE sing 46 n n C5 H16 0WE sing 47 n n C38 H17 0WE sing 48 n n C38 H18 0WE sing 49 n n C38 H19 0WE sing 50 n n C14 H20 0WE sing 51 n n C13 H21 0WE sing 52 n n C12 H22 0WE sing 53 n n C11 H23 0WE sing 54 n n # _atom_sites.entry_id 4JQC _atom_sites.fract_transf_matrix[1][1] 0.012536 _atom_sites.fract_transf_matrix[1][2] 0.007238 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014475 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003081 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD A 1 301 503 NAD NAD . D 3 0WE A 1 302 1 0WE LIG . E 2 NAD B 1 301 503 NAD NAD . F 3 0WE B 1 302 1 0WE LIG . G 4 HOH A 1 401 8 HOH HOH . G 4 HOH A 2 402 15 HOH HOH . G 4 HOH A 3 403 17 HOH HOH . G 4 HOH A 4 404 24 HOH HOH . G 4 HOH A 5 405 25 HOH HOH . G 4 HOH A 6 406 65 HOH HOH . G 4 HOH A 7 407 94 HOH HOH . G 4 HOH A 8 408 99 HOH HOH . G 4 HOH A 9 409 112 HOH HOH . G 4 HOH A 10 410 121 HOH HOH . G 4 HOH A 11 411 124 HOH HOH . H 4 HOH B 1 401 5 HOH HOH . H 4 HOH B 2 402 7 HOH HOH . H 4 HOH B 3 403 16 HOH HOH . H 4 HOH B 4 404 19 HOH HOH . H 4 HOH B 5 405 26 HOH HOH . H 4 HOH B 6 406 38 HOH HOH . H 4 HOH B 7 407 49 HOH HOH . H 4 HOH B 8 408 68 HOH HOH . H 4 HOH B 9 409 77 HOH HOH . H 4 HOH B 10 410 84 HOH HOH . H 4 HOH B 11 411 107 HOH HOH . H 4 HOH B 12 412 109 HOH HOH . H 4 HOH B 13 413 110 HOH HOH . H 4 HOH B 14 414 122 HOH HOH . H 4 HOH B 15 415 125 HOH HOH . H 4 HOH B 16 416 127 HOH HOH . H 4 HOH B 17 417 128 HOH HOH . H 4 HOH B 18 418 129 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 0WE . . . F 3 7.29 42.173 10.106 1 33.45 ? O2 0WE 302 B 1 HETATM 2 C C1 0WE . . . F 3 7.397 42.619 8.964 1 32.81 ? C1 0WE 302 B 1 HETATM 3 C C17 0WE . . . F 3 7.836 41.683 7.928 1 32.9 ? C17 0WE 302 B 1 HETATM 4 C C18 0WE . . . F 3 7.834 41.802 6.588 1 33.27 ? C18 0WE 302 B 1 HETATM 5 C C19 0WE . . . F 3 8.272 40.773 5.643 1 33.37 ? C19 0WE 302 B 1 HETATM 6 C C24 0WE . . . F 3 8.315 41.11 4.279 1 33.41 ? C24 0WE 302 B 1 HETATM 7 C C23 0WE . . . F 3 8.696 40.142 3.341 1 33.49 ? C23 0WE 302 B 1 HETATM 8 C C26 0WE . . . F 3 8.785 40.421 1.898 1 33.39 ? C26 0WE 302 B 1 HETATM 9 C C25 0WE . . . F 3 9.239 39.464 1.053 1 33.4 ? C25 0WE 302 B 1 HETATM 10 C C20 0WE . . . F 3 8.641 39.463 6.012 1 33.23 ? C20 0WE 302 B 1 HETATM 11 N N21 0WE . . . F 3 9.007 38.526 5.117 1 33.1 ? N21 0WE 302 B 1 HETATM 12 C C22 0WE . . . F 3 9.04 38.859 3.809 1 33.43 ? C22 0WE 302 B 1 HETATM 13 N N36 0WE . . . F 3 9.435 37.906 2.859 1 33.41 ? N36 0WE 302 B 1 HETATM 14 C C37 0WE . . . F 3 9.579 38.12 1.537 1 33.57 ? C37 0WE 302 B 1 HETATM 15 O O28 0WE . . . F 3 9.967 37.213 0.802 1 34.53 ? O28 0WE 302 B 1 HETATM 16 N N3 0WE . . . F 3 7.123 43.939 8.739 1 32.59 ? N3 0WE 302 B 1 HETATM 17 C C4 0WE . . . F 3 6.717 44.728 9.914 1 32.49 ? C4 0WE 302 B 1 HETATM 18 C C5 0WE . . . F 3 7.076 44.723 7.494 1 32.36 ? C5 0WE 302 B 1 HETATM 19 C C6 0WE . . . F 3 5.687 44.725 6.926 1 32.09 ? C6 0WE 302 B 1 HETATM 20 O O10 0WE . . . F 3 5.318 43.67 6.125 1 32 ? O10 0WE 302 B 1 HETATM 21 C C9 0WE . . . F 3 3.953 43.759 5.947 1 32.07 ? C9 0WE 302 B 1 HETATM 22 C C8 0WE . . . F 3 3.472 44.881 6.659 1 32 ? C8 0WE 302 B 1 HETATM 23 C C7 0WE . . . F 3 4.607 45.524 7.237 1 32.09 ? C7 0WE 302 B 1 HETATM 24 C C38 0WE . . . F 3 4.563 46.781 8.053 1 32.38 ? C38 0WE 302 B 1 HETATM 25 C C14 0WE . . . F 3 3.116 42.932 5.181 1 32.12 ? C14 0WE 302 B 1 HETATM 26 C C13 0WE . . . F 3 1.742 43.242 5.119 1 32.08 ? C13 0WE 302 B 1 HETATM 27 C C12 0WE . . . F 3 1.229 44.333 5.852 1 32.25 ? C12 0WE 302 B 1 HETATM 28 C C11 0WE . . . F 3 2.087 45.132 6.633 1 32.2 ? C11 0WE 302 B 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #