data_4JRG # _model_server_result.job_id eEEJDDc1-9vZ3jqcbeAyWA _model_server_result.datetime_utc '2024-11-22 19:01:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jrg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 4JRG # _exptl.entry_id 4JRG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 518.475 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3R,4R,5S)-3-(3-chlorophenyl)-4-(4-chlorophenyl)-4-cyano-N-[(3S)-3,4-dihydroxybutyl]-5-(2,2-dimethylpropyl)-D-prolinamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.78 _cell.angle_gamma 90 _cell.entry_id 4JRG _cell.length_a 73.542 _cell.length_b 72.796 _cell.length_c 43.865 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JRG _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C27 H33 Cl2 N3 O3' _chem_comp.formula_weight 518.475 _chem_comp.id I09 _chem_comp.mon_nstd_flag . _chem_comp.name (3R,4R,5S)-3-(3-chlorophenyl)-4-(4-chlorophenyl)-4-cyano-N-[(3S)-3,4-dihydroxybutyl]-5-(2,2-dimethylpropyl)-D-prolinamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C44 C42 I09 sing 152 n n C43 C42 I09 sing 153 n n C42 C45 I09 sing 154 n n C42 C41 I09 sing 155 n n C41 C4 I09 sing 156 n n CL3 C34 I09 sing 157 n n C33 C34 I09 doub 158 n y C33 C32 I09 sing 159 n y C4 N1 I09 sing 160 n n C4 C3 I09 sing 161 n n C34 C35 I09 sing 162 n y C32 C31 I09 doub 163 n y O14 C14 I09 sing 164 n n N1 C1 I09 sing 165 n n C35 C36 I09 doub 166 n y C12 N11 I09 sing 167 n n C12 C13 I09 sing 168 n n C31 C36 I09 sing 169 n y C31 C3 I09 sing 170 n n N11 C10 I09 sing 171 n n C3 C37 I09 sing 172 n n C3 C2 I09 sing 173 n n C14 C13 I09 sing 174 n n C14 C15 I09 sing 175 n n C1 C10 I09 sing 176 n n C1 C2 I09 sing 177 n n C10 O10 I09 doub 178 n n C37 N37 I09 trip 179 n n C2 C21 I09 sing 180 n n O15 C15 I09 sing 181 n n C21 C22 I09 doub 182 n y C21 C26 I09 sing 183 n y C22 C23 I09 sing 184 n y C26 C25 I09 doub 185 n y C23 CL2 I09 sing 186 n n C23 C24 I09 doub 187 n y C25 C24 I09 sing 188 n y C1 H1 I09 sing 189 n n N11 H2 I09 sing 190 n n C12 H3 I09 sing 191 n n C12 H4 I09 sing 192 n n C13 H5 I09 sing 193 n n C13 H6 I09 sing 194 n n C14 H7 I09 sing 195 n n O14 H8 I09 sing 196 n n C15 H9 I09 sing 197 n n C15 H10 I09 sing 198 n n O15 H11 I09 sing 199 n n N1 H12 I09 sing 200 n n C2 H14 I09 sing 201 n n C26 H15 I09 sing 202 n n C25 H16 I09 sing 203 n n C22 H17 I09 sing 204 n n C24 H18 I09 sing 205 n n C32 H19 I09 sing 206 n n C33 H20 I09 sing 207 n n C36 H21 I09 sing 208 n n C35 H22 I09 sing 209 n n C4 H23 I09 sing 210 n n C41 H24 I09 sing 211 n n C41 H25 I09 sing 212 n n C45 H26 I09 sing 213 n n C45 H27 I09 sing 214 n n C45 H28 I09 sing 215 n n C44 H29 I09 sing 216 n n C44 H30 I09 sing 217 n n C44 H31 I09 sing 218 n n C43 H32 I09 sing 219 n n C43 H33 I09 sing 220 n n C43 H34 I09 sing 221 n n # _atom_sites.entry_id 4JRG _atom_sites.fract_transf_matrix[1][1] 0.013598 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005434 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013737 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02455 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 I09 A 1 201 1 I09 I09 . D 2 I09 B 1 201 1 I09 I09 . E 3 HOH A 1 301 1 HOH HOH . E 3 HOH A 2 302 3 HOH HOH . E 3 HOH A 3 303 4 HOH HOH . E 3 HOH A 4 304 5 HOH HOH . E 3 HOH A 5 305 7 HOH HOH . E 3 HOH A 6 306 8 HOH HOH . E 3 HOH A 7 307 9 HOH HOH . E 3 HOH A 8 308 10 HOH HOH . E 3 HOH A 9 309 12 HOH HOH . E 3 HOH A 10 310 15 HOH HOH . E 3 HOH A 11 311 18 HOH HOH . E 3 HOH A 12 312 19 HOH HOH . E 3 HOH A 13 313 20 HOH HOH . E 3 HOH A 14 314 21 HOH HOH . E 3 HOH A 15 315 23 HOH HOH . E 3 HOH A 16 316 26 HOH HOH . E 3 HOH A 17 317 27 HOH HOH . E 3 HOH A 18 318 28 HOH HOH . E 3 HOH A 19 319 30 HOH HOH . E 3 HOH A 20 320 33 HOH HOH . E 3 HOH A 21 321 35 HOH HOH . E 3 HOH A 22 322 37 HOH HOH . E 3 HOH A 23 323 38 HOH HOH . E 3 HOH A 24 324 39 HOH HOH . E 3 HOH A 25 325 40 HOH HOH . E 3 HOH A 26 326 44 HOH HOH . E 3 HOH A 27 327 46 HOH HOH . E 3 HOH A 28 328 47 HOH HOH . E 3 HOH A 29 329 49 HOH HOH . E 3 HOH A 30 330 54 HOH HOH . E 3 HOH A 31 331 55 HOH HOH . E 3 HOH A 32 332 56 HOH HOH . E 3 HOH A 33 333 57 HOH HOH . E 3 HOH A 34 334 58 HOH HOH . E 3 HOH A 35 335 59 HOH HOH . E 3 HOH A 36 336 61 HOH HOH . E 3 HOH A 37 337 62 HOH HOH . E 3 HOH A 38 338 66 HOH HOH . E 3 HOH A 39 339 69 HOH HOH . E 3 HOH A 40 340 74 HOH HOH . E 3 HOH A 41 341 79 HOH HOH . E 3 HOH A 42 342 80 HOH HOH . E 3 HOH A 43 343 81 HOH HOH . E 3 HOH A 44 344 84 HOH HOH . E 3 HOH A 45 345 88 HOH HOH . E 3 HOH A 46 346 90 HOH HOH . E 3 HOH A 47 347 95 HOH HOH . E 3 HOH A 48 348 96 HOH HOH . E 3 HOH A 49 349 97 HOH HOH . E 3 HOH A 50 350 99 HOH HOH . E 3 HOH A 51 351 100 HOH HOH . E 3 HOH A 52 352 102 HOH HOH . E 3 HOH A 53 353 103 HOH HOH . E 3 HOH A 54 354 107 HOH HOH . E 3 HOH A 55 355 109 HOH HOH . E 3 HOH A 56 356 111 HOH HOH . E 3 HOH A 57 357 114 HOH HOH . E 3 HOH A 58 358 115 HOH HOH . E 3 HOH A 59 359 119 HOH HOH . E 3 HOH A 60 360 120 HOH HOH . E 3 HOH A 61 361 125 HOH HOH . E 3 HOH A 62 362 128 HOH HOH . E 3 HOH A 63 363 129 HOH HOH . E 3 HOH A 64 364 130 HOH HOH . E 3 HOH A 65 365 131 HOH HOH . E 3 HOH A 66 366 132 HOH HOH . E 3 HOH A 67 367 133 HOH HOH . E 3 HOH A 68 368 134 HOH HOH . E 3 HOH A 69 369 135 HOH HOH . E 3 HOH A 70 370 139 HOH HOH . E 3 HOH A 71 371 140 HOH HOH . E 3 HOH A 72 372 142 HOH HOH . E 3 HOH A 73 373 22 HOH HOH . F 3 HOH B 1 301 2 HOH HOH . F 3 HOH B 2 302 6 HOH HOH . F 3 HOH B 3 303 11 HOH HOH . F 3 HOH B 4 304 13 HOH HOH . F 3 HOH B 5 305 14 HOH HOH . F 3 HOH B 6 306 16 HOH HOH . F 3 HOH B 7 307 17 HOH HOH . F 3 HOH B 8 308 24 HOH HOH . F 3 HOH B 9 309 25 HOH HOH . F 3 HOH B 10 310 29 HOH HOH . F 3 HOH B 11 311 31 HOH HOH . F 3 HOH B 12 312 32 HOH HOH . F 3 HOH B 13 313 34 HOH HOH . F 3 HOH B 14 314 36 HOH HOH . F 3 HOH B 15 315 41 HOH HOH . F 3 HOH B 16 316 42 HOH HOH . F 3 HOH B 17 317 43 HOH HOH . F 3 HOH B 18 318 45 HOH HOH . F 3 HOH B 19 319 48 HOH HOH . F 3 HOH B 20 320 50 HOH HOH . F 3 HOH B 21 321 51 HOH HOH . F 3 HOH B 22 322 52 HOH HOH . F 3 HOH B 23 323 53 HOH HOH . F 3 HOH B 24 324 60 HOH HOH . F 3 HOH B 25 325 64 HOH HOH . F 3 HOH B 26 326 67 HOH HOH . F 3 HOH B 27 327 70 HOH HOH . F 3 HOH B 28 328 71 HOH HOH . F 3 HOH B 29 329 72 HOH HOH . F 3 HOH B 30 330 75 HOH HOH . F 3 HOH B 31 331 76 HOH HOH . F 3 HOH B 32 332 77 HOH HOH . F 3 HOH B 33 333 78 HOH HOH . F 3 HOH B 34 334 82 HOH HOH . F 3 HOH B 35 335 83 HOH HOH . F 3 HOH B 36 336 85 HOH HOH . F 3 HOH B 37 337 87 HOH HOH . F 3 HOH B 38 338 89 HOH HOH . F 3 HOH B 39 339 92 HOH HOH . F 3 HOH B 40 340 93 HOH HOH . F 3 HOH B 41 341 94 HOH HOH . F 3 HOH B 42 342 101 HOH HOH . F 3 HOH B 43 343 104 HOH HOH . F 3 HOH B 44 344 108 HOH HOH . F 3 HOH B 45 345 112 HOH HOH . F 3 HOH B 46 346 113 HOH HOH . F 3 HOH B 47 347 117 HOH HOH . F 3 HOH B 48 348 118 HOH HOH . F 3 HOH B 49 349 122 HOH HOH . F 3 HOH B 50 350 123 HOH HOH . F 3 HOH B 51 351 124 HOH HOH . F 3 HOH B 52 352 126 HOH HOH . F 3 HOH B 53 353 127 HOH HOH . F 3 HOH B 54 354 141 HOH HOH . F 3 HOH B 55 355 143 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 I09 . . . C 2 11.781 10.738 -1.043 1 33.12 ? C1 I09 201 A 1 HETATM 2 C C10 I09 . . . C 2 12.414 11.957 -0.431 1 35.14 ? C10 I09 201 A 1 HETATM 3 N N11 I09 . . . C 2 11.556 12.817 0.22 1 36.28 ? N11 I09 201 A 1 HETATM 4 C C12 I09 . . . C 2 12.033 14.023 0.89 1 45 ? C12 I09 201 A 1 HETATM 5 C C13 I09 . . . C 2 12.241 15.149 -0.123 1 52.06 ? C13 I09 201 A 1 HETATM 6 C C14 I09 . . . C 2 12.646 16.423 0.616 1 56.12 ? C14 I09 201 A 1 HETATM 7 O O14 I09 . . . C 2 11.5 17.054 1.182 1 59.31 ? O14 I09 201 A 1 HETATM 8 C C15 I09 . . . C 2 13.403 17.385 -0.31 1 56.96 ? C15 I09 201 A 1 HETATM 9 O O15 I09 . . . C 2 12.564 17.825 -1.369 1 59.93 ? O15 I09 201 A 1 HETATM 10 O O10 I09 . . . C 2 13.634 12.192 -0.479 1 30.53 ? O10 I09 201 A 1 HETATM 11 N N1 I09 . . . C 2 10.35 10.632 -0.589 1 33.8 ? N1 I09 201 A 1 HETATM 12 C C2 I09 . . . C 2 12.467 9.466 -0.549 1 32.43 ? C2 I09 201 A 1 HETATM 13 C C21 I09 . . . C 2 13.595 9.007 -1.435 1 30.66 ? C21 I09 201 A 1 HETATM 14 C C26 I09 . . . C 2 13.601 9.292 -2.802 1 29.3 ? C26 I09 201 A 1 HETATM 15 C C25 I09 . . . C 2 14.641 8.817 -3.613 1 31.33 ? C25 I09 201 A 1 HETATM 16 C C22 I09 . . . C 2 14.63 8.269 -0.877 1 30.95 ? C22 I09 201 A 1 HETATM 17 C C23 I09 . . . C 2 15.669 7.801 -1.685 1 32.21 ? C23 I09 201 A 1 HETATM 18 CL CL2 I09 . . . C 2 16.985 6.894 -0.955 1 31.95 ? CL2 I09 201 A 1 HETATM 19 C C24 I09 . . . C 2 15.678 8.063 -3.063 1 30 ? C24 I09 201 A 1 HETATM 20 C C3 I09 . . . C 2 11.33 8.456 -0.438 1 33.01 ? C3 I09 201 A 1 HETATM 21 C C37 I09 . . . C 2 10.965 7.977 -1.78 1 33.46 ? C37 I09 201 A 1 HETATM 22 N N37 I09 . . . C 2 10.689 7.604 -2.82 1 30.61 ? N37 I09 201 A 1 HETATM 23 C C31 I09 . . . C 2 11.662 7.293 0.469 1 34.73 ? C31 I09 201 A 1 HETATM 24 C C32 I09 . . . C 2 12.218 7.516 1.745 1 33.81 ? C32 I09 201 A 1 HETATM 25 C C33 I09 . . . C 2 12.538 6.429 2.561 1 34.6 ? C33 I09 201 A 1 HETATM 26 C C36 I09 . . . C 2 11.426 5.988 0.024 1 33.78 ? C36 I09 201 A 1 HETATM 27 C C35 I09 . . . C 2 11.742 4.901 0.841 1 35.58 ? C35 I09 201 A 1 HETATM 28 C C34 I09 . . . C 2 12.299 5.122 2.104 1 35.43 ? C34 I09 201 A 1 HETATM 29 CL CL3 I09 . . . C 2 12.718 3.745 3.119 1 42.55 ? CL3 I09 201 A 1 HETATM 30 C C4 I09 . . . C 2 10.187 9.303 0.095 1 33.05 ? C4 I09 201 A 1 HETATM 31 C C41 I09 . . . C 2 8.816 8.67 -0.208 1 32.79 ? C41 I09 201 A 1 HETATM 32 C C42 I09 . . . C 2 7.72 9.186 0.758 1 35.51 ? C42 I09 201 A 1 HETATM 33 C C45 I09 . . . C 2 7.803 10.724 0.897 1 36.02 ? C45 I09 201 A 1 HETATM 34 C C44 I09 . . . C 2 7.901 8.544 2.142 1 32.65 ? C44 I09 201 A 1 HETATM 35 C C43 I09 . . . C 2 6.336 8.796 0.21 1 33.24 ? C43 I09 201 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 35 #