data_4JRV
#
_model_server_result.job_id            o9frnh6R0ykIPPKn6QD8Ug 
_model_server_result.datetime_utc      '2024-12-22 01:33:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4jrv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1001}' 
#
_entry.id    4JRV 
#
_exptl.entry_id    4JRV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              535.636 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-(dimethylamino)-N-[3-(4-{[(1S)-2-hydroxy-1-phenylethyl]amino}-6-phenylfuro[2,3-d]pyrimidin-5-yl)phenyl]butanamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4JRV 
_cell.length_a            146.391 
_cell.length_b            146.391 
_cell.length_c            146.391 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4JRV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        197 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C32 H33 N5 O3' 
_chem_comp.formula_weight    535.636 
_chem_comp.id                KJV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-(dimethylamino)-N-[3-(4-{[(1S)-2-hydroxy-1-phenylethyl]amino}-6-phenylfuro[2,3-d]pyrimidin-5-yl)phenyl]butanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C36 N34 KJV sing 173 n n 
C33 N34 KJV sing 174 n n 
C33 C32 KJV sing 175 n n 
N34 C35 KJV sing 176 n n 
C31 C32 KJV sing 177 n n 
C31 C29 KJV sing 178 n n 
C29 O30 KJV doub 179 n n 
C29 N28 KJV sing 180 n n 
N28 C21 KJV sing 181 n n 
C21 C20 KJV doub 182 n y 
C21 C22 KJV sing 183 n y 
O C KJV sing 184 n n 
C20 C19 KJV sing 185 n y 
C22 C10 KJV doub 186 n y 
C CA KJV sing 187 n n 
C19 C18 KJV doub 188 n y 
CA N KJV sing 189 n n 
CA C12 KJV sing 190 n n 
C10 C18 KJV sing 191 n y 
C10 C7 KJV sing 192 n n 
N C6 KJV sing 193 n n 
C24 C23 KJV doub 194 n y 
C24 C25 KJV sing 195 n y 
C23 C11 KJV sing 196 n y 
C17 C12 KJV doub 197 n y 
C17 C16 KJV sing 198 n y 
C7 C1 KJV sing 199 n y 
C7 C8 KJV doub 200 n y 
C6 C1 KJV doub 201 n y 
C6 N5 KJV sing 202 n y 
C12 C13 KJV sing 203 n y 
C1 C2 KJV sing 204 n y 
C25 C26 KJV doub 205 n y 
C11 C8 KJV sing 206 n n 
C11 C27 KJV doub 207 n y 
C8 O9 KJV sing 208 n y 
N5 C4 KJV doub 209 n y 
C16 C15 KJV doub 210 n y 
C2 O9 KJV sing 211 n y 
C2 N3 KJV doub 212 n y 
C26 C27 KJV sing 213 n y 
C13 C14 KJV doub 214 n y 
C4 N3 KJV sing 215 n y 
C15 C14 KJV sing 216 n y 
C35 H1 KJV sing 217 n n 
C35 H2 KJV sing 218 n n 
C35 H3 KJV sing 219 n n 
C36 H5 KJV sing 220 n n 
C36 H6 KJV sing 221 n n 
C36 H7 KJV sing 222 n n 
C33 H8 KJV sing 223 n n 
C33 H9 KJV sing 224 n n 
C32 H10 KJV sing 225 n n 
C32 H11 KJV sing 226 n n 
C31 H12 KJV sing 227 n n 
C31 H13 KJV sing 228 n n 
N28 H14 KJV sing 229 n n 
C22 H15 KJV sing 230 n n 
C20 H16 KJV sing 231 n n 
C19 H17 KJV sing 232 n n 
C18 H18 KJV sing 233 n n 
C23 H19 KJV sing 234 n n 
C24 H20 KJV sing 235 n n 
C25 H21 KJV sing 236 n n 
C26 H22 KJV sing 237 n n 
C27 H23 KJV sing 238 n n 
C4 H24 KJV sing 239 n n 
N H25 KJV sing 240 n n 
CA H26 KJV sing 241 n n 
C H27 KJV sing 242 n n 
C H28 KJV sing 243 n n 
O H29 KJV sing 244 n n 
C13 H30 KJV sing 245 n n 
C14 H31 KJV sing 246 n n 
C15 H32 KJV sing 247 n n 
C16 H33 KJV sing 248 n n 
C17 H34 KJV sing 249 n n 
#
_atom_sites.entry_id                     4JRV 
_atom_sites.fract_transf_matrix[1][1]    0.006831 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006831 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006831 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 KJV A 1 1001 1996 KJV K80 . 
C 3 HOH A 1 2001 2001 HOH HOH . 
C 3 HOH A 2 2002 2002 HOH HOH . 
C 3 HOH A 3 2003 2003 HOH HOH . 
C 3 HOH A 4 2004 2004 HOH HOH . 
C 3 HOH A 5 2005 2005 HOH HOH . 
C 3 HOH A 6 2006 2006 HOH HOH . 
C 3 HOH A 7 2007 2007 HOH HOH . 
C 3 HOH A 8 2008 2008 HOH HOH . 
C 3 HOH A 9 2009 2009 HOH HOH . 
C 3 HOH A 10 2010 2010 HOH HOH . 
C 3 HOH A 11 2011 2011 HOH HOH . 
C 3 HOH A 12 2012 2012 HOH HOH . 
C 3 HOH A 13 2013 2013 HOH HOH . 
C 3 HOH A 14 2014 2014 HOH HOH . 
C 3 HOH A 15 2015 2015 HOH HOH . 
C 3 HOH A 16 2016 2016 HOH HOH . 
C 3 HOH A 17 2017 2017 HOH HOH . 
C 3 HOH A 18 2018 2018 HOH HOH . 
C 3 HOH A 19 2019 2019 HOH HOH . 
C 3 HOH A 20 2020 2020 HOH HOH . 
C 3 HOH A 21 2021 2021 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C35 KJV . . . B 2 -26.736 -48.011 -7.921 1 54.87 ? C35 KJV 1001 A 1 
HETATM 2 N N34 KJV . . . B 2 -26.466 -49.455 -8.007 1 66.59 ? N34 KJV 1001 A 1 
HETATM 3 C C36 KJV . . . B 2 -27.227 -50.013 -9.136 1 57.63 ? C36 KJV 1001 A 1 
HETATM 4 C C33 KJV . . . B 2 -25.012 -49.68 -8.188 1 63.92 ? C33 KJV 1001 A 1 
HETATM 5 C C32 KJV . . . B 2 -24.363 -50.171 -6.889 1 61.5 ? C32 KJV 1001 A 1 
HETATM 6 C C31 KJV . . . B 2 -22.843 -50.014 -6.933 1 51.68 ? C31 KJV 1001 A 1 
HETATM 7 C C29 KJV . . . B 2 -22.371 -49.579 -5.537 1 62.36 ? C29 KJV 1001 A 1 
HETATM 8 O O30 KJV . . . B 2 -21.928 -48.444 -5.358 1 71.64 ? O30 KJV 1001 A 1 
HETATM 9 N N28 KJV . . . B 2 -22.502 -50.528 -4.58 1 62.74 ? N28 KJV 1001 A 1 
HETATM 10 C C21 KJV . . . B 2 -22.17 -50.289 -3.295 1 53 ? C21 KJV 1001 A 1 
HETATM 11 C C22 KJV . . . B 2 -21.965 -51.377 -2.45 1 51.33 ? C22 KJV 1001 A 1 
HETATM 12 C C20 KJV . . . B 2 -22.072 -48.995 -2.765 1 48.5 ? C20 KJV 1001 A 1 
HETATM 13 C C19 KJV . . . B 2 -21.752 -48.816 -1.423 1 54.06 ? C19 KJV 1001 A 1 
HETATM 14 C C18 KJV . . . B 2 -21.545 -49.912 -0.588 1 59.59 ? C18 KJV 1001 A 1 
HETATM 15 C C10 KJV . . . B 2 -21.649 -51.207 -1.097 1 55.77 ? C10 KJV 1001 A 1 
HETATM 16 C C7 KJV . . . B 2 -21.459 -52.277 -0.302 1 56.35 ? C7 KJV 1001 A 1 
HETATM 17 C C1 KJV . . . B 2 -22.43 -53.151 0.077 1 53.13 ? C1 KJV 1001 A 1 
HETATM 18 C C8 KJV . . . B 2 -20.298 -52.662 0.263 1 51.55 ? C8 KJV 1001 A 1 
HETATM 19 C C11 KJV . . . B 2 -19.05 -52.16 0.201 1 54.57 ? C11 KJV 1001 A 1 
HETATM 20 C C23 KJV . . . B 2 -18.611 -51.279 -0.799 1 57.7 ? C23 KJV 1001 A 1 
HETATM 21 C C24 KJV . . . B 2 -17.292 -50.819 -0.813 1 48.51 ? C24 KJV 1001 A 1 
HETATM 22 C C25 KJV . . . B 2 -16.388 -51.248 0.155 1 46.34 ? C25 KJV 1001 A 1 
HETATM 23 C C26 KJV . . . B 2 -16.806 -52.136 1.141 1 48.42 ? C26 KJV 1001 A 1 
HETATM 24 C C27 KJV . . . B 2 -18.123 -52.591 1.158 1 53.08 ? C27 KJV 1001 A 1 
HETATM 25 O O9 KJV . . . B 2 -20.538 -53.742 0.96 1 54.73 ? O9 KJV 1001 A 1 
HETATM 26 C C2 KJV . . . B 2 -21.81 -54.055 0.865 1 50.43 ? C2 KJV 1001 A 1 
HETATM 27 N N3 KJV . . . B 2 -22.459 -55.091 1.426 1 45.53 ? N3 KJV 1001 A 1 
HETATM 28 C C4 KJV . . . B 2 -23.819 -55.258 1.208 1 47.07 ? C4 KJV 1001 A 1 
HETATM 29 N N5 KJV . . . B 2 -24.456 -54.331 0.399 1 50.27 ? N5 KJV 1001 A 1 
HETATM 30 C C6 KJV . . . B 2 -23.766 -53.312 -0.153 1 52.2 ? C6 KJV 1001 A 1 
HETATM 31 N N KJV . . . B 2 -24.451 -52.43 -0.908 1 49.25 ? N KJV 1001 A 1 
HETATM 32 C CA KJV . . . B 2 -25.879 -52.643 -1.273 1 56.3 ? CA KJV 1001 A 1 
HETATM 33 C C KJV . . . B 2 -26.368 -51.535 -2.185 1 59.72 ? C KJV 1001 A 1 
HETATM 34 O O KJV . . . B 2 -25.367 -51.459 -3.206 1 66.37 ? O KJV 1001 A 1 
HETATM 35 C C12 KJV . . . B 2 -26.736 -52.693 -0.148 1 57.67 ? C12 KJV 1001 A 1 
HETATM 36 C C13 KJV . . . B 2 -26.283 -52.499 1.164 1 54.11 ? C13 KJV 1001 A 1 
HETATM 37 C C14 KJV . . . B 2 -27.171 -52.569 2.234 1 55.08 ? C14 KJV 1001 A 1 
HETATM 38 C C15 KJV . . . B 2 -28.521 -52.822 2.012 1 57.17 ? C15 KJV 1001 A 1 
HETATM 39 C C16 KJV . . . B 2 -28.979 -53.011 0.712 1 54.62 ? C16 KJV 1001 A 1 
HETATM 40 C C17 KJV . . . B 2 -28.09 -52.947 -0.36 1 57.5 ? C17 KJV 1001 A 1 
#
_model_server_stats.io_time_ms              31 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           321 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           40 
#