data_4JRY # _model_server_result.job_id AED4Un1iZogxNxnXFhd8Lg _model_server_result.datetime_utc '2024-11-02 03:37:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jry # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":102}' # _entry.id 4JRY # _exptl.entry_id 4JRY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4JRY _cell.length_a 237.6 _cell.length_b 237.6 _cell.length_c 61.2 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JRY _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 G N N ? 7 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? disulf ? disulf4 D SG CYS 23 D CYS 23 1_555 D SG CYS 89 D CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? disulf ? disulf5 D SG CYS 134 D CYS 149 1_555 D SG CYS 184 D CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf6 D SG CYS 159 D CYS 174 1_555 E SG CYS 169 E CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? disulf ? disulf7 E SG CYS 22 E CYS 23 1_555 E SG CYS 90 E CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? disulf ? disulf8 E SG CYS 143 E CYS 157 1_555 E SG CYS 208 E CYS 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? metalc ? metalc1 B OD1 ASN 84 B ASN 83 1_555 G MG MG . B MG 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc2 B O HIS 85 B HIS 84 1_555 G MG MG . B MG 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.69 ? metalc ? metalc3 B O LEU 88 B LEU 87 1_555 G MG MG . B MG 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4JRY _atom_sites.fract_transf_matrix[1][1] 0.004209 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004209 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01634 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 NA B 1 101 1 NA NA . G 7 MG B 1 102 2 MG MG . H 7 MG B 1 103 3 MG MG . I 8 HOH A 1 301 1 HOH HOH . I 8 HOH A 2 302 2 HOH HOH . I 8 HOH A 3 303 21 HOH HOH . I 8 HOH A 4 304 30 HOH HOH . I 8 HOH A 5 305 33 HOH HOH . I 8 HOH A 6 306 35 HOH HOH . I 8 HOH A 7 307 38 HOH HOH . I 8 HOH A 8 308 60 HOH HOH . I 8 HOH A 9 309 62 HOH HOH . I 8 HOH A 10 310 64 HOH HOH . I 8 HOH A 11 311 65 HOH HOH . I 8 HOH A 12 312 69 HOH HOH . I 8 HOH A 13 313 73 HOH HOH . I 8 HOH A 14 314 83 HOH HOH . I 8 HOH A 15 315 91 HOH HOH . I 8 HOH A 16 316 97 HOH HOH . I 8 HOH A 17 317 101 HOH HOH . I 8 HOH A 18 318 104 HOH HOH . I 8 HOH A 19 319 118 HOH HOH . I 8 HOH A 20 320 123 HOH HOH . J 8 HOH B 1 201 13 HOH HOH . J 8 HOH B 2 202 17 HOH HOH . J 8 HOH B 3 203 32 HOH HOH . J 8 HOH B 4 204 39 HOH HOH . J 8 HOH B 5 205 43 HOH HOH . J 8 HOH B 6 206 49 HOH HOH . J 8 HOH B 7 207 52 HOH HOH . J 8 HOH B 8 208 58 HOH HOH . J 8 HOH B 9 209 75 HOH HOH . J 8 HOH B 10 210 80 HOH HOH . J 8 HOH B 11 211 89 HOH HOH . J 8 HOH B 12 212 98 HOH HOH . J 8 HOH B 13 213 107 HOH HOH . J 8 HOH B 14 214 121 HOH HOH . K 8 HOH C 1 101 47 HOH HOH . K 8 HOH C 2 102 55 HOH HOH . L 8 HOH D 1 301 3 HOH HOH . L 8 HOH D 2 302 4 HOH HOH . L 8 HOH D 3 303 6 HOH HOH . L 8 HOH D 4 304 8 HOH HOH . L 8 HOH D 5 305 11 HOH HOH . L 8 HOH D 6 306 12 HOH HOH . L 8 HOH D 7 307 14 HOH HOH . L 8 HOH D 8 308 18 HOH HOH . L 8 HOH D 9 309 19 HOH HOH . L 8 HOH D 10 310 20 HOH HOH . L 8 HOH D 11 311 31 HOH HOH . L 8 HOH D 12 312 36 HOH HOH . L 8 HOH D 13 313 40 HOH HOH . L 8 HOH D 14 314 46 HOH HOH . L 8 HOH D 15 315 51 HOH HOH . L 8 HOH D 16 316 54 HOH HOH . L 8 HOH D 17 317 66 HOH HOH . L 8 HOH D 18 318 72 HOH HOH . L 8 HOH D 19 319 86 HOH HOH . L 8 HOH D 20 320 87 HOH HOH . L 8 HOH D 21 321 88 HOH HOH . L 8 HOH D 22 322 92 HOH HOH . L 8 HOH D 23 323 96 HOH HOH . L 8 HOH D 24 324 99 HOH HOH . L 8 HOH D 25 325 100 HOH HOH . L 8 HOH D 26 326 110 HOH HOH . L 8 HOH D 27 327 111 HOH HOH . L 8 HOH D 28 328 116 HOH HOH . L 8 HOH D 29 329 117 HOH HOH . L 8 HOH D 30 330 119 HOH HOH . L 8 HOH D 31 331 120 HOH HOH . L 8 HOH D 32 332 122 HOH HOH . M 8 HOH E 1 301 5 HOH HOH . M 8 HOH E 2 302 7 HOH HOH . M 8 HOH E 3 303 9 HOH HOH . M 8 HOH E 4 304 10 HOH HOH . M 8 HOH E 5 305 15 HOH HOH . M 8 HOH E 6 306 16 HOH HOH . M 8 HOH E 7 307 22 HOH HOH . M 8 HOH E 8 308 23 HOH HOH . M 8 HOH E 9 309 24 HOH HOH . M 8 HOH E 10 310 25 HOH HOH . M 8 HOH E 11 311 26 HOH HOH . M 8 HOH E 12 312 27 HOH HOH . M 8 HOH E 13 313 28 HOH HOH . M 8 HOH E 14 314 29 HOH HOH . M 8 HOH E 15 315 34 HOH HOH . M 8 HOH E 16 316 37 HOH HOH . M 8 HOH E 17 317 41 HOH HOH . M 8 HOH E 18 318 42 HOH HOH . M 8 HOH E 19 319 44 HOH HOH . M 8 HOH E 20 320 45 HOH HOH . M 8 HOH E 21 321 48 HOH HOH . M 8 HOH E 22 322 50 HOH HOH . M 8 HOH E 23 323 53 HOH HOH . M 8 HOH E 24 324 56 HOH HOH . M 8 HOH E 25 325 57 HOH HOH . M 8 HOH E 26 326 59 HOH HOH . M 8 HOH E 27 327 61 HOH HOH . M 8 HOH E 28 328 63 HOH HOH . M 8 HOH E 29 329 67 HOH HOH . M 8 HOH E 30 330 68 HOH HOH . M 8 HOH E 31 331 70 HOH HOH . M 8 HOH E 32 332 71 HOH HOH . M 8 HOH E 33 333 74 HOH HOH . M 8 HOH E 34 334 76 HOH HOH . M 8 HOH E 35 335 77 HOH HOH . M 8 HOH E 36 336 78 HOH HOH . M 8 HOH E 37 337 79 HOH HOH . M 8 HOH E 38 338 81 HOH HOH . M 8 HOH E 39 339 82 HOH HOH . M 8 HOH E 40 340 84 HOH HOH . M 8 HOH E 41 341 85 HOH HOH . M 8 HOH E 42 342 90 HOH HOH . M 8 HOH E 43 343 93 HOH HOH . M 8 HOH E 44 344 94 HOH HOH . M 8 HOH E 45 345 95 HOH HOH . M 8 HOH E 46 346 102 HOH HOH . M 8 HOH E 47 347 103 HOH HOH . M 8 HOH E 48 348 105 HOH HOH . M 8 HOH E 49 349 106 HOH HOH . M 8 HOH E 50 350 108 HOH HOH . M 8 HOH E 51 351 109 HOH HOH . M 8 HOH E 52 352 112 HOH HOH . M 8 HOH E 53 353 113 HOH HOH . M 8 HOH E 54 354 114 HOH HOH . M 8 HOH E 55 355 115 HOH HOH . M 8 HOH E 56 356 124 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 7 _atom_site.Cartn_x 16.114 _atom_site.Cartn_y -35.336 _atom_site.Cartn_z 14.101 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 60.12 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 102 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #