data_4JSI # _model_server_result.job_id uFfC0NGbTL7SvTZTPYjIhw _model_server_result.datetime_utc '2024-11-27 00:09:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jsi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":802}' # _entry.id 4JSI # _exptl.entry_id 4JSI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 241.247 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5,6,7,8-TETRAHYDROBIOPTERIN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4JSI _cell.length_a 51.597 _cell.length_b 110.778 _cell.length_c 164.565 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JSI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 30 A CYS 326 1_555 G ZN ZN . A ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc2 A SG CYS 35 A CYS 331 1_555 G ZN ZN . A ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc3 A SG CYS 119 A CYS 415 1_555 C FE HEM . A HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? metalc ? metalc4 G ZN ZN . A ZN 805 1_555 B SG CYS 30 B CYS 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc5 G ZN ZN . A ZN 805 1_555 B SG CYS 35 B CYS 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc6 B SG CYS 119 B CYS 415 1_555 H FE HEM . B HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? # _chem_comp.formula 'C9 H15 N5 O3' _chem_comp.formula_weight 241.247 _chem_comp.id H4B _chem_comp.mon_nstd_flag . _chem_comp.name 5,6,7,8-TETRAHYDROBIOPTERIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 H4B doub 135 n y N1 C8A H4B sing 136 n y C2 N2 H4B sing 137 n n C2 N3 H4B sing 138 n y N2 HN21 H4B sing 139 n n N2 HN22 H4B sing 140 n n N3 C4 H4B sing 141 n y N3 HN3 H4B sing 142 n n C4 O4 H4B doub 143 n n C4 C4A H4B sing 144 n y C4A C8A H4B doub 145 n y C4A N5 H4B sing 146 n n C8A N8 H4B sing 147 n n N5 C6 H4B sing 148 n n N5 HN5 H4B sing 149 n n N8 C7 H4B sing 150 n n N8 HN8 H4B sing 151 n n C6 C7 H4B sing 152 n n C6 C9 H4B sing 153 n n C6 H6 H4B sing 154 n n C7 H71 H4B sing 155 n n C7 H72 H4B sing 156 n n C9 O9 H4B sing 157 n n C9 C10 H4B sing 158 n n C9 H9 H4B sing 159 n n O9 HO9 H4B sing 160 n n C10 C11 H4B sing 161 n n C10 O10 H4B sing 162 n n C10 H10 H4B sing 163 n n C11 H111 H4B sing 164 n n C11 H112 H4B sing 165 n n C11 H113 H4B sing 166 n n O10 HO0 H4B sing 167 n n # _atom_sites.entry_id 4JSI _atom_sites.fract_transf_matrix[1][1] 0.019381 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009027 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006077 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 801 750 HEM HEM . D 3 H4B A 1 802 760 H4B BH4 . E 4 Q05 A 1 803 800 Q05 Q05 . F 5 ACT A 1 804 860 ACT ACT . G 6 ZN A 1 805 900 ZN ZN . H 2 HEM B 1 801 750 HEM HEM . I 3 H4B B 1 802 760 H4B BH4 . J 4 Q05 B 1 803 800 Q05 Q05 . K 5 ACT B 1 804 860 ACT ACT . L 7 HOH A 1 901 1 HOH HOH . L 7 HOH A 2 902 3 HOH HOH . L 7 HOH A 3 903 6 HOH HOH . L 7 HOH A 4 904 8 HOH HOH . L 7 HOH A 5 905 9 HOH HOH . L 7 HOH A 6 906 10 HOH HOH . L 7 HOH A 7 907 13 HOH HOH . L 7 HOH A 8 908 16 HOH HOH . L 7 HOH A 9 909 19 HOH HOH . L 7 HOH A 10 910 24 HOH HOH . L 7 HOH A 11 911 27 HOH HOH . L 7 HOH A 12 912 28 HOH HOH . L 7 HOH A 13 913 36 HOH HOH . L 7 HOH A 14 914 38 HOH HOH . L 7 HOH A 15 915 40 HOH HOH . L 7 HOH A 16 916 41 HOH HOH . L 7 HOH A 17 917 44 HOH HOH . L 7 HOH A 18 918 46 HOH HOH . L 7 HOH A 19 919 47 HOH HOH . L 7 HOH A 20 920 48 HOH HOH . L 7 HOH A 21 921 49 HOH HOH . L 7 HOH A 22 922 50 HOH HOH . L 7 HOH A 23 923 53 HOH HOH . L 7 HOH A 24 924 56 HOH HOH . L 7 HOH A 25 925 60 HOH HOH . L 7 HOH A 26 926 64 HOH HOH . L 7 HOH A 27 927 66 HOH HOH . L 7 HOH A 28 928 68 HOH HOH . L 7 HOH A 29 929 70 HOH HOH . L 7 HOH A 30 930 72 HOH HOH . L 7 HOH A 31 931 75 HOH HOH . L 7 HOH A 32 932 76 HOH HOH . L 7 HOH A 33 933 77 HOH HOH . L 7 HOH A 34 934 78 HOH HOH . L 7 HOH A 35 935 83 HOH HOH . L 7 HOH A 36 936 84 HOH HOH . L 7 HOH A 37 937 88 HOH HOH . L 7 HOH A 38 938 89 HOH HOH . L 7 HOH A 39 939 97 HOH HOH . L 7 HOH A 40 940 100 HOH HOH . L 7 HOH A 41 941 105 HOH HOH . L 7 HOH A 42 942 106 HOH HOH . L 7 HOH A 43 943 109 HOH HOH . L 7 HOH A 44 944 112 HOH HOH . L 7 HOH A 45 945 117 HOH HOH . L 7 HOH A 46 946 121 HOH HOH . L 7 HOH A 47 947 122 HOH HOH . L 7 HOH A 48 948 129 HOH HOH . L 7 HOH A 49 949 130 HOH HOH . L 7 HOH A 50 950 131 HOH HOH . L 7 HOH A 51 951 133 HOH HOH . L 7 HOH A 52 952 135 HOH HOH . L 7 HOH A 53 953 138 HOH HOH . L 7 HOH A 54 954 139 HOH HOH . L 7 HOH A 55 955 140 HOH HOH . L 7 HOH A 56 956 142 HOH HOH . L 7 HOH A 57 957 146 HOH HOH . L 7 HOH A 58 958 147 HOH HOH . L 7 HOH A 59 959 148 HOH HOH . L 7 HOH A 60 960 149 HOH HOH . L 7 HOH A 61 961 152 HOH HOH . L 7 HOH A 62 962 153 HOH HOH . L 7 HOH A 63 963 154 HOH HOH . L 7 HOH A 64 964 155 HOH HOH . L 7 HOH A 65 965 156 HOH HOH . L 7 HOH A 66 966 157 HOH HOH . L 7 HOH A 67 967 158 HOH HOH . L 7 HOH A 68 968 159 HOH HOH . L 7 HOH A 69 969 160 HOH HOH . L 7 HOH A 70 970 161 HOH HOH . L 7 HOH A 71 971 162 HOH HOH . L 7 HOH A 72 972 163 HOH HOH . L 7 HOH A 73 973 164 HOH HOH . L 7 HOH A 74 974 165 HOH HOH . L 7 HOH A 75 975 166 HOH HOH . L 7 HOH A 76 976 167 HOH HOH . L 7 HOH A 77 977 168 HOH HOH . L 7 HOH A 78 978 169 HOH HOH . L 7 HOH A 79 979 170 HOH HOH . L 7 HOH A 80 980 171 HOH HOH . L 7 HOH A 81 981 172 HOH HOH . L 7 HOH A 82 982 173 HOH HOH . L 7 HOH A 83 983 174 HOH HOH . L 7 HOH A 84 984 175 HOH HOH . L 7 HOH A 85 985 176 HOH HOH . L 7 HOH A 86 986 177 HOH HOH . L 7 HOH A 87 987 178 HOH HOH . L 7 HOH A 88 988 179 HOH HOH . L 7 HOH A 89 989 180 HOH HOH . L 7 HOH A 90 990 181 HOH HOH . L 7 HOH A 91 991 182 HOH HOH . L 7 HOH A 92 992 185 HOH HOH . L 7 HOH A 93 993 186 HOH HOH . L 7 HOH A 94 994 187 HOH HOH . L 7 HOH A 95 995 188 HOH HOH . M 7 HOH B 1 901 2 HOH HOH . M 7 HOH B 2 902 4 HOH HOH . M 7 HOH B 3 903 5 HOH HOH . M 7 HOH B 4 904 7 HOH HOH . M 7 HOH B 5 905 11 HOH HOH . M 7 HOH B 6 906 12 HOH HOH . M 7 HOH B 7 907 14 HOH HOH . M 7 HOH B 8 908 15 HOH HOH . M 7 HOH B 9 909 17 HOH HOH . M 7 HOH B 10 910 18 HOH HOH . M 7 HOH B 11 911 20 HOH HOH . M 7 HOH B 12 912 21 HOH HOH . M 7 HOH B 13 913 22 HOH HOH . M 7 HOH B 14 914 23 HOH HOH . M 7 HOH B 15 915 25 HOH HOH . M 7 HOH B 16 916 26 HOH HOH . M 7 HOH B 17 917 29 HOH HOH . M 7 HOH B 18 918 30 HOH HOH . M 7 HOH B 19 919 31 HOH HOH . M 7 HOH B 20 920 32 HOH HOH . M 7 HOH B 21 921 33 HOH HOH . M 7 HOH B 22 922 34 HOH HOH . M 7 HOH B 23 923 35 HOH HOH . M 7 HOH B 24 924 37 HOH HOH . M 7 HOH B 25 925 39 HOH HOH . M 7 HOH B 26 926 42 HOH HOH . M 7 HOH B 27 927 43 HOH HOH . M 7 HOH B 28 928 45 HOH HOH . M 7 HOH B 29 929 51 HOH HOH . M 7 HOH B 30 930 52 HOH HOH . M 7 HOH B 31 931 54 HOH HOH . M 7 HOH B 32 932 55 HOH HOH . M 7 HOH B 33 933 57 HOH HOH . M 7 HOH B 34 934 58 HOH HOH . M 7 HOH B 35 935 59 HOH HOH . M 7 HOH B 36 936 61 HOH HOH . M 7 HOH B 37 937 62 HOH HOH . M 7 HOH B 38 938 63 HOH HOH . M 7 HOH B 39 939 65 HOH HOH . M 7 HOH B 40 940 67 HOH HOH . M 7 HOH B 41 941 69 HOH HOH . M 7 HOH B 42 942 71 HOH HOH . M 7 HOH B 43 943 73 HOH HOH . M 7 HOH B 44 944 74 HOH HOH . M 7 HOH B 45 945 79 HOH HOH . M 7 HOH B 46 946 80 HOH HOH . M 7 HOH B 47 947 81 HOH HOH . M 7 HOH B 48 948 82 HOH HOH . M 7 HOH B 49 949 85 HOH HOH . M 7 HOH B 50 950 86 HOH HOH . M 7 HOH B 51 951 87 HOH HOH . M 7 HOH B 52 952 90 HOH HOH . M 7 HOH B 53 953 91 HOH HOH . M 7 HOH B 54 954 92 HOH HOH . M 7 HOH B 55 955 93 HOH HOH . M 7 HOH B 56 956 94 HOH HOH . M 7 HOH B 57 957 95 HOH HOH . M 7 HOH B 58 958 96 HOH HOH . M 7 HOH B 59 959 98 HOH HOH . M 7 HOH B 60 960 99 HOH HOH . M 7 HOH B 61 961 101 HOH HOH . M 7 HOH B 62 962 102 HOH HOH . M 7 HOH B 63 963 103 HOH HOH . M 7 HOH B 64 964 104 HOH HOH . M 7 HOH B 65 965 107 HOH HOH . M 7 HOH B 66 966 108 HOH HOH . M 7 HOH B 67 967 110 HOH HOH . M 7 HOH B 68 968 111 HOH HOH . M 7 HOH B 69 969 113 HOH HOH . M 7 HOH B 70 970 114 HOH HOH . M 7 HOH B 71 971 115 HOH HOH . M 7 HOH B 72 972 116 HOH HOH . M 7 HOH B 73 973 118 HOH HOH . M 7 HOH B 74 974 119 HOH HOH . M 7 HOH B 75 975 120 HOH HOH . M 7 HOH B 76 976 123 HOH HOH . M 7 HOH B 77 977 124 HOH HOH . M 7 HOH B 78 978 125 HOH HOH . M 7 HOH B 79 979 126 HOH HOH . M 7 HOH B 80 980 127 HOH HOH . M 7 HOH B 81 981 128 HOH HOH . M 7 HOH B 82 982 132 HOH HOH . M 7 HOH B 83 983 134 HOH HOH . M 7 HOH B 84 984 136 HOH HOH . M 7 HOH B 85 985 137 HOH HOH . M 7 HOH B 86 986 141 HOH HOH . M 7 HOH B 87 987 143 HOH HOH . M 7 HOH B 88 988 144 HOH HOH . M 7 HOH B 89 989 145 HOH HOH . M 7 HOH B 90 990 150 HOH HOH . M 7 HOH B 91 991 151 HOH HOH . M 7 HOH B 92 992 183 HOH HOH . M 7 HOH B 93 993 184 HOH HOH . M 7 HOH B 94 994 189 HOH HOH . M 7 HOH B 95 995 190 HOH HOH . M 7 HOH B 96 996 191 HOH HOH . M 7 HOH B 97 997 192 HOH HOH . M 7 HOH B 98 998 193 HOH HOH . M 7 HOH B 99 999 194 HOH HOH . M 7 HOH B 100 1000 195 HOH HOH . M 7 HOH B 101 1001 196 HOH HOH . M 7 HOH B 102 1002 197 HOH HOH . M 7 HOH B 103 1003 198 HOH HOH . M 7 HOH B 104 1004 199 HOH HOH . M 7 HOH B 105 1005 200 HOH HOH . M 7 HOH B 106 1006 201 HOH HOH . M 7 HOH B 107 1007 202 HOH HOH . M 7 HOH B 108 1008 203 HOH HOH . M 7 HOH B 109 1009 204 HOH HOH . M 7 HOH B 110 1010 205 HOH HOH . M 7 HOH B 111 1011 206 HOH HOH . M 7 HOH B 112 1012 207 HOH HOH . M 7 HOH B 113 1013 208 HOH HOH . M 7 HOH B 114 1014 209 HOH HOH . M 7 HOH B 115 1015 210 HOH HOH . M 7 HOH B 116 1016 211 HOH HOH . M 7 HOH B 117 1017 212 HOH HOH . M 7 HOH B 118 1018 213 HOH HOH . M 7 HOH B 119 1019 214 HOH HOH . M 7 HOH B 120 1020 215 HOH HOH . M 7 HOH B 121 1021 216 HOH HOH . M 7 HOH B 122 1022 217 HOH HOH . M 7 HOH B 123 1023 218 HOH HOH . M 7 HOH B 124 1024 219 HOH HOH . M 7 HOH B 125 1025 220 HOH HOH . M 7 HOH B 126 1026 221 HOH HOH . M 7 HOH B 127 1027 222 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 H4B . . . I 3 14.147 3.468 48.539 1 45.88 ? N1 H4B 802 B 1 HETATM 2 C C2 H4B . . . I 3 14.17 2.991 49.818 1 47.11 ? C2 H4B 802 B 1 HETATM 3 N N2 H4B . . . I 3 13.069 2.319 50.32 1 41.84 ? N2 H4B 802 B 1 HETATM 4 N N3 H4B . . . I 3 15.289 3.179 50.561 1 45.81 ? N3 H4B 802 B 1 HETATM 5 C C4 H4B . . . I 3 16.379 3.861 50.081 1 46.41 ? C4 H4B 802 B 1 HETATM 6 O O4 H4B . . . I 3 17.424 4.013 50.797 1 47.12 ? O4 H4B 802 B 1 HETATM 7 C C4A H4B . . . I 3 16.332 4.363 48.782 1 43.96 ? C4A H4B 802 B 1 HETATM 8 C C8A H4B . . . I 3 15.175 4.151 48.021 1 42.95 ? C8A H4B 802 B 1 HETATM 9 N N5 H4B . . . I 3 17.355 5.06 48.236 1 40.07 ? N5 H4B 802 B 1 HETATM 10 N N8 H4B . . . I 3 15.089 4.612 46.749 1 40.3 ? N8 H4B 802 B 1 HETATM 11 C C6 H4B . . . I 3 17.052 6.03 47.192 1 44.51 ? C6 H4B 802 B 1 HETATM 12 C C7 H4B . . . I 3 16.194 5.354 46.117 1 42.69 ? C7 H4B 802 B 1 HETATM 13 C C9 H4B . . . I 3 18.321 6.622 46.566 1 48.44 ? C9 H4B 802 B 1 HETATM 14 O O9 H4B . . . I 3 19.166 5.567 46.115 1 50.04 ? O9 H4B 802 B 1 HETATM 15 C C10 H4B . . . I 3 18.034 7.486 45.343 1 50.08 ? C10 H4B 802 B 1 HETATM 16 C C11 H4B . . . I 3 19.327 8.115 44.818 1 44.56 ? C11 H4B 802 B 1 HETATM 17 O O10 H4B . . . I 3 17.031 8.459 45.665 1 47.98 ? O10 H4B 802 B 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 17 #