data_4JT9 # _model_server_result.job_id kEc8ZWXUJDu30PMyIzqARg _model_server_result.datetime_utc '2025-01-10 12:21:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jt9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 4JT9 # _exptl.entry_id 4JT9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 383.489 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-(4-{2-[(methylsulfonyl)amino]ethyl}piperidin-1-yl)thieno[3,2-d]pyrimidine-6-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4JT9 _cell.length_a 120.464 _cell.length_b 120.464 _cell.length_c 44.468 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JT9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 142 A CYS 256 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc2 A SG CYS 145 A CYS 259 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc3 A SG CYS 166 A CYS 280 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc4 A SG CYS 169 A CYS 283 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc5 F NA NA . A NA 405 1_555 G O HOH . A HOH 628 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.838 ? metalc ? metalc6 F NA NA . A NA 405 1_555 G O HOH . A HOH 629 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.794 ? metalc ? metalc7 F NA NA . A NA 405 1_555 G O HOH . A HOH 653 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? # _chem_comp.formula 'C15 H21 N5 O3 S2' _chem_comp.formula_weight 383.489 _chem_comp.id 1NS _chem_comp.mon_nstd_flag . _chem_comp.name 4-(4-{2-[(methylsulfonyl)amino]ethyl}piperidin-1-yl)thieno[3,2-d]pyrimidine-6-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O25 S02 1NS doub 1 n n O24 S02 1NS doub 2 n n N03 S02 1NS sing 3 n n N03 C04 1NS sing 4 n n S02 C01 1NS sing 5 n n C04 C05 1NS sing 6 n n C05 C06 1NS sing 7 n n C06 C07 1NS sing 8 n n C06 C23 1NS sing 9 n n C07 C08 1NS sing 10 n n C23 C22 1NS sing 11 n n C08 N09 1NS sing 12 n n C22 N09 1NS sing 13 n n N09 C10 1NS sing 14 n n O17 C15 1NS doub 15 n n S18 C11 1NS sing 16 n y S18 C14 1NS sing 17 n y C10 C11 1NS doub 18 n y C10 N21 1NS sing 19 n y C11 C12 1NS sing 20 n y C15 C14 1NS sing 21 n n C15 N16 1NS sing 22 n n C14 C13 1NS doub 23 n y N21 C20 1NS doub 24 n y C12 C13 1NS sing 25 n y C12 N19 1NS doub 26 n y C20 N19 1NS sing 27 n y C01 H1 1NS sing 28 n n C01 H2 1NS sing 29 n n C01 H3 1NS sing 30 n n N03 H4 1NS sing 31 n n C04 H5 1NS sing 32 n n C04 H6 1NS sing 33 n n C05 H7 1NS sing 34 n n C05 H8 1NS sing 35 n n C06 H9 1NS sing 36 n n C07 H10 1NS sing 37 n n C07 H11 1NS sing 38 n n C08 H12 1NS sing 39 n n C08 H13 1NS sing 40 n n C13 H14 1NS sing 41 n n N16 H15 1NS sing 42 n n N16 H16 1NS sing 43 n n C20 H17 1NS sing 44 n n C22 H18 1NS sing 45 n n C22 H19 1NS sing 46 n n C23 H20 1NS sing 47 n n C23 H21 1NS sing 48 n n # _atom_sites.entry_id 4JT9 _atom_sites.fract_transf_matrix[1][1] 0.008301 _atom_sites.fract_transf_matrix[1][2] 0.004793 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009585 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022488 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 401 1 ZN ZN . C 3 1NS A 1 402 1 1NS 1NS . D 4 GOL A 1 403 1 GOL GOL . E 4 GOL A 1 404 2 GOL GOL . F 5 NA A 1 405 1 NA NA . G 6 HOH A 1 501 1 HOH HOH . G 6 HOH A 2 502 2 HOH HOH . G 6 HOH A 3 503 3 HOH HOH . G 6 HOH A 4 504 4 HOH HOH . G 6 HOH A 5 505 5 HOH HOH . G 6 HOH A 6 506 6 HOH HOH . G 6 HOH A 7 507 7 HOH HOH . G 6 HOH A 8 508 8 HOH HOH . G 6 HOH A 9 509 9 HOH HOH . G 6 HOH A 10 510 10 HOH HOH . G 6 HOH A 11 511 11 HOH HOH . G 6 HOH A 12 512 12 HOH HOH . G 6 HOH A 13 513 13 HOH HOH . G 6 HOH A 14 514 14 HOH HOH . G 6 HOH A 15 515 15 HOH HOH . G 6 HOH A 16 516 16 HOH HOH . G 6 HOH A 17 517 17 HOH HOH . G 6 HOH A 18 518 18 HOH HOH . G 6 HOH A 19 519 19 HOH HOH . G 6 HOH A 20 520 20 HOH HOH . G 6 HOH A 21 521 21 HOH HOH . G 6 HOH A 22 522 22 HOH HOH . G 6 HOH A 23 523 23 HOH HOH . G 6 HOH A 24 524 24 HOH HOH . G 6 HOH A 25 525 25 HOH HOH . G 6 HOH A 26 526 26 HOH HOH . G 6 HOH A 27 527 27 HOH HOH . G 6 HOH A 28 528 28 HOH HOH . G 6 HOH A 29 529 29 HOH HOH . G 6 HOH A 30 530 30 HOH HOH . G 6 HOH A 31 531 31 HOH HOH . G 6 HOH A 32 532 32 HOH HOH . G 6 HOH A 33 533 33 HOH HOH . G 6 HOH A 34 534 34 HOH HOH . G 6 HOH A 35 535 35 HOH HOH . G 6 HOH A 36 536 36 HOH HOH . G 6 HOH A 37 537 37 HOH HOH . G 6 HOH A 38 538 38 HOH HOH . G 6 HOH A 39 539 39 HOH HOH . G 6 HOH A 40 540 40 HOH HOH . G 6 HOH A 41 541 41 HOH HOH . G 6 HOH A 42 542 42 HOH HOH . G 6 HOH A 43 543 43 HOH HOH . G 6 HOH A 44 544 44 HOH HOH . G 6 HOH A 45 545 45 HOH HOH . G 6 HOH A 46 546 46 HOH HOH . G 6 HOH A 47 547 47 HOH HOH . G 6 HOH A 48 548 48 HOH HOH . G 6 HOH A 49 549 49 HOH HOH . G 6 HOH A 50 550 50 HOH HOH . G 6 HOH A 51 551 51 HOH HOH . G 6 HOH A 52 552 52 HOH HOH . G 6 HOH A 53 553 53 HOH HOH . G 6 HOH A 54 554 54 HOH HOH . G 6 HOH A 55 555 55 HOH HOH . G 6 HOH A 56 556 56 HOH HOH . G 6 HOH A 57 557 57 HOH HOH . G 6 HOH A 58 558 58 HOH HOH . G 6 HOH A 59 559 59 HOH HOH . G 6 HOH A 60 560 60 HOH HOH . G 6 HOH A 61 561 61 HOH HOH . G 6 HOH A 62 562 62 HOH HOH . G 6 HOH A 63 563 63 HOH HOH . G 6 HOH A 64 564 64 HOH HOH . G 6 HOH A 65 565 65 HOH HOH . G 6 HOH A 66 566 66 HOH HOH . G 6 HOH A 67 567 67 HOH HOH . G 6 HOH A 68 568 68 HOH HOH . G 6 HOH A 69 569 69 HOH HOH . G 6 HOH A 70 570 70 HOH HOH . G 6 HOH A 71 571 71 HOH HOH . G 6 HOH A 72 572 72 HOH HOH . G 6 HOH A 73 573 73 HOH HOH . G 6 HOH A 74 574 74 HOH HOH . G 6 HOH A 75 575 75 HOH HOH . G 6 HOH A 76 576 76 HOH HOH . G 6 HOH A 77 577 77 HOH HOH . G 6 HOH A 78 578 78 HOH HOH . G 6 HOH A 79 579 79 HOH HOH . G 6 HOH A 80 580 80 HOH HOH . G 6 HOH A 81 581 81 HOH HOH . G 6 HOH A 82 582 82 HOH HOH . G 6 HOH A 83 583 83 HOH HOH . G 6 HOH A 84 584 84 HOH HOH . G 6 HOH A 85 585 85 HOH HOH . G 6 HOH A 86 586 86 HOH HOH . G 6 HOH A 87 587 87 HOH HOH . G 6 HOH A 88 588 88 HOH HOH . G 6 HOH A 89 589 89 HOH HOH . G 6 HOH A 90 590 90 HOH HOH . G 6 HOH A 91 591 91 HOH HOH . G 6 HOH A 92 592 92 HOH HOH . G 6 HOH A 93 593 93 HOH HOH . G 6 HOH A 94 594 94 HOH HOH . G 6 HOH A 95 595 95 HOH HOH . G 6 HOH A 96 596 96 HOH HOH . G 6 HOH A 97 597 97 HOH HOH . G 6 HOH A 98 598 98 HOH HOH . G 6 HOH A 99 599 99 HOH HOH . G 6 HOH A 100 600 100 HOH HOH . G 6 HOH A 101 601 101 HOH HOH . G 6 HOH A 102 602 102 HOH HOH . G 6 HOH A 103 603 103 HOH HOH . G 6 HOH A 104 604 104 HOH HOH . G 6 HOH A 105 605 105 HOH HOH . G 6 HOH A 106 606 106 HOH HOH . G 6 HOH A 107 607 107 HOH HOH . G 6 HOH A 108 608 108 HOH HOH . G 6 HOH A 109 609 109 HOH HOH . G 6 HOH A 110 610 110 HOH HOH . G 6 HOH A 111 611 111 HOH HOH . G 6 HOH A 112 612 112 HOH HOH . G 6 HOH A 113 613 113 HOH HOH . G 6 HOH A 114 614 114 HOH HOH . G 6 HOH A 115 615 115 HOH HOH . G 6 HOH A 116 616 116 HOH HOH . G 6 HOH A 117 617 117 HOH HOH . G 6 HOH A 118 618 118 HOH HOH . G 6 HOH A 119 619 119 HOH HOH . G 6 HOH A 120 620 120 HOH HOH . G 6 HOH A 121 621 121 HOH HOH . G 6 HOH A 122 622 122 HOH HOH . G 6 HOH A 123 623 123 HOH HOH . G 6 HOH A 124 624 124 HOH HOH . G 6 HOH A 125 625 125 HOH HOH . G 6 HOH A 126 626 126 HOH HOH . G 6 HOH A 127 627 127 HOH HOH . G 6 HOH A 128 628 129 HOH HOH . G 6 HOH A 129 629 130 HOH HOH . G 6 HOH A 130 630 131 HOH HOH . G 6 HOH A 131 631 132 HOH HOH . G 6 HOH A 132 632 133 HOH HOH . G 6 HOH A 133 633 134 HOH HOH . G 6 HOH A 134 634 135 HOH HOH . G 6 HOH A 135 635 136 HOH HOH . G 6 HOH A 136 636 137 HOH HOH . G 6 HOH A 137 637 138 HOH HOH . G 6 HOH A 138 638 139 HOH HOH . G 6 HOH A 139 639 140 HOH HOH . G 6 HOH A 140 640 141 HOH HOH . G 6 HOH A 141 641 142 HOH HOH . G 6 HOH A 142 642 143 HOH HOH . G 6 HOH A 143 643 144 HOH HOH . G 6 HOH A 144 644 145 HOH HOH . G 6 HOH A 145 645 146 HOH HOH . G 6 HOH A 146 646 147 HOH HOH . G 6 HOH A 147 647 148 HOH HOH . G 6 HOH A 148 648 149 HOH HOH . G 6 HOH A 149 649 150 HOH HOH . G 6 HOH A 150 650 151 HOH HOH . G 6 HOH A 151 651 152 HOH HOH . G 6 HOH A 152 652 153 HOH HOH . G 6 HOH A 153 653 154 HOH HOH . G 6 HOH A 154 654 1 HOH HOH . G 6 HOH A 155 655 2 HOH HOH . G 6 HOH A 156 656 3 HOH HOH . G 6 HOH A 157 657 4 HOH HOH . G 6 HOH A 158 658 5 HOH HOH . G 6 HOH A 159 659 6 HOH HOH . G 6 HOH A 160 660 7 HOH HOH . G 6 HOH A 161 661 8 HOH HOH . G 6 HOH A 162 662 9 HOH HOH . G 6 HOH A 163 663 10 HOH HOH . G 6 HOH A 164 664 11 HOH HOH . G 6 HOH A 165 665 12 HOH HOH . G 6 HOH A 166 666 13 HOH HOH . G 6 HOH A 167 667 14 HOH HOH . G 6 HOH A 168 668 15 HOH HOH . G 6 HOH A 169 669 16 HOH HOH . G 6 HOH A 170 670 17 HOH HOH . G 6 HOH A 171 671 18 HOH HOH . G 6 HOH A 172 672 19 HOH HOH . G 6 HOH A 173 673 20 HOH HOH . G 6 HOH A 174 674 21 HOH HOH . G 6 HOH A 175 675 22 HOH HOH . G 6 HOH A 176 676 23 HOH HOH . G 6 HOH A 177 677 24 HOH HOH . G 6 HOH A 178 678 25 HOH HOH . G 6 HOH A 179 679 26 HOH HOH . G 6 HOH A 180 680 27 HOH HOH . G 6 HOH A 181 681 28 HOH HOH . G 6 HOH A 182 682 29 HOH HOH . G 6 HOH A 183 683 30 HOH HOH . G 6 HOH A 184 684 31 HOH HOH . G 6 HOH A 185 685 32 HOH HOH . G 6 HOH A 186 686 33 HOH HOH . G 6 HOH A 187 687 34 HOH HOH . G 6 HOH A 188 688 35 HOH HOH . G 6 HOH A 189 689 36 HOH HOH . G 6 HOH A 190 690 37 HOH HOH . G 6 HOH A 191 691 38 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 1NS . . . C 3 25.371 48.388 -12.983 1 39.41 ? C01 1NS 402 A 1 HETATM 2 S S02 1NS . . . C 3 25.112 47.813 -14.61 1 38.48 ? S02 1NS 402 A 1 HETATM 3 N N03 1NS . . . C 3 25.535 46.206 -14.812 1 38.83 ? N03 1NS 402 A 1 HETATM 4 C C04 1NS . . . C 3 24.538 45.274 -14.554 1 36.18 ? C04 1NS 402 A 1 HETATM 5 C C05 1NS . . . C 3 24.91 44.319 -13.417 1 34.03 ? C05 1NS 402 A 1 HETATM 6 C C06 1NS . . . C 3 24.493 44.919 -12.09 1 32.35 ? C06 1NS 402 A 1 HETATM 7 C C07 1NS . . . C 3 23.358 44.137 -11.584 1 31.42 ? C07 1NS 402 A 1 HETATM 8 C C08 1NS . . . C 3 22.91 44.752 -10.301 1 30.56 ? C08 1NS 402 A 1 HETATM 9 N N09 1NS . . . C 3 24.042 44.862 -9.381 1 29.82 ? N09 1NS 402 A 1 HETATM 10 C C10 1NS . . . C 3 24.344 44.204 -8.113 1 28.66 ? C10 1NS 402 A 1 HETATM 11 C C11 1NS . . . C 3 23.699 43.005 -7.76 1 27.58 ? C11 1NS 402 A 1 HETATM 12 C C12 1NS . . . C 3 24.009 42.413 -6.508 1 26.59 ? C12 1NS 402 A 1 HETATM 13 C C13 1NS . . . C 3 23.253 41.123 -6.243 1 27.44 ? C13 1NS 402 A 1 HETATM 14 C C14 1NS . . . C 3 22.423 40.832 -7.371 1 26.78 ? C14 1NS 402 A 1 HETATM 15 C C15 1NS . . . C 3 21.556 39.711 -7.509 1 28.03 ? C15 1NS 402 A 1 HETATM 16 N N16 1NS . . . C 3 21.203 38.947 -6.338 1 28.07 ? N16 1NS 402 A 1 HETATM 17 O O17 1NS . . . C 3 21.09 39.432 -8.617 1 30.71 ? O17 1NS 402 A 1 HETATM 18 S S18 1NS . . . C 3 22.608 42.026 -8.559 1 29.31 ? S18 1NS 402 A 1 HETATM 19 N N19 1NS . . . C 3 24.903 43.055 -5.687 1 26.46 ? N19 1NS 402 A 1 HETATM 20 C C20 1NS . . . C 3 25.496 44.202 -6.029 1 26.14 ? C20 1NS 402 A 1 HETATM 21 N N21 1NS . . . C 3 25.209 44.79 -7.23 1 28.2 ? N21 1NS 402 A 1 HETATM 22 C C22 1NS . . . C 3 25.187 45.625 -9.825 1 30.74 ? C22 1NS 402 A 1 HETATM 23 C C23 1NS . . . C 3 25.641 45.086 -11.154 1 31.51 ? C23 1NS 402 A 1 HETATM 24 O O24 1NS . . . C 3 23.892 48.164 -15.143 1 39.85 ? O24 1NS 402 A 1 HETATM 25 O O25 1NS . . . C 3 26.024 48.572 -15.577 1 40.96 ? O25 1NS 402 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #