data_4JUO # _model_server_result.job_id H-y4wFvvz1ZUjji8SWnHQw _model_server_result.datetime_utc '2024-10-17 13:19:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4juo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":101}' # _entry.id 4JUO # _exptl.entry_id 4JUO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 361.368 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(3S)-9-fluoro-3-methyl-10-(4-methylpiperazin-1-yl)-7-oxo-2,3-dihydro-7H-[1,4]oxazino[2,3,4-ij]quinoline-6-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4JUO _cell.length_a 213.58 _cell.length_b 213.58 _cell.length_c 211.83 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JUO _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 8 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 G MG MG . A MG 501 1_555 I O03 LFX . F LFX 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc2 G MG MG . A MG 501 1_555 I O02 LFX . F LFX 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc3 B OD2 ASP 529 C ASP 506 1_555 H MG MG . C MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.884 ? metalc ? metalc4 B OD2 ASP 531 C ASP 508 1_555 H MG MG . C MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? hydrog WATSON-CRICK hydrog1 C N3 DC 5 E DC 9 1_555 D N1 DG 11 F DG 11 1_555 ? A ? ? A ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 C N4 DC 5 E DC 9 1_555 D O6 DG 11 F DG 11 1_555 ? A ? ? A ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 C O2 DC 5 E DC 9 1_555 D N2 DG 11 F DG 11 1_555 ? A ? ? A ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 C N1 DA 6 E DA 10 1_555 D N3 DT 10 F DT 10 1_555 ? A ? ? A ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 C N6 DA 6 E DA 10 1_555 D O4 DT 10 F DT 10 1_555 ? A ? ? A ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 C N3 DT 7 E DT 11 1_555 D N1 DA 9 F DA 9 1_555 ? A ? ? A ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 C O4 DT 7 E DT 11 1_555 D N6 DA 9 F DA 9 1_555 ? A ? ? A ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 C N1 DG 8 E DG 12 1_555 D N3 DC 8 F DC 8 1_555 ? A ? ? A ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 C N2 DG 8 E DG 12 1_555 D O2 DC 8 F DC 8 1_555 ? A ? ? A ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 C O6 DG 8 E DG 12 1_555 D N4 DC 8 F DC 8 1_555 ? A ? ? A ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 C N1 DA 9 E DA 13 1_555 D N3 DT 7 F DT 7 1_555 ? A ? ? A ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 C N6 DA 9 E DA 13 1_555 D O4 DT 7 F DT 7 1_555 ? A ? ? A ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 C N1 DA 10 E DA 14 1_555 D N3 DT 6 F DT 6 1_555 ? A ? ? A ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 C N6 DA 10 E DA 14 1_555 D O4 DT 6 F DT 6 1_555 ? A ? ? A ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 C N3 DT 11 E DT 15 1_555 D N1 DA 5 F DA 5 1_555 ? A ? ? A ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 C O4 DT 11 E DT 15 1_555 D N6 DA 5 F DA 5 1_555 ? A ? ? A ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C18 H20 F N3 O4' _chem_comp.formula_weight 361.368 _chem_comp.id LFX _chem_comp.mon_nstd_flag . _chem_comp.name '(3S)-9-fluoro-3-methyl-10-(4-methylpiperazin-1-yl)-7-oxo-2,3-dihydro-7H-[1,4]oxazino[2,3,4-ij]quinoline-6-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Levofloxacin # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 C LFX sing 328 n n C O03 LFX sing 329 n n C O LFX doub 330 n n F C11 LFX sing 331 n n C16 N LFX sing 332 n n C08 N LFX sing 333 n n N C07 LFX sing 334 n n H01 C01 LFX sing 335 n n C07 C01 LFX sing 336 n n C01 H01A LFX sing 337 n n C01 N01 LFX sing 338 n n C02 N01 LFX sing 339 n n N01 C04 LFX sing 340 n n O01 C06 LFX sing 341 n n O01 C09 LFX sing 342 n n C08 C02 LFX sing 343 n n H02A C02 LFX sing 344 n n C02 H02 LFX sing 345 n n C05 N02 LFX sing 346 n n C03 N02 LFX sing 347 n n N02 C12 LFX sing 348 n n C15 O02 LFX doub 349 n n C09 C03 LFX sing 350 n n C03 C14 LFX sing 351 n n C03 H03 LFX sing 352 n n HO03 O03 LFX sing 353 n n C04 C11 LFX doub 354 n y C04 C06 LFX sing 355 n y C06 C05 LFX doub 356 n y C05 C10 LFX sing 357 n y H07A C07 LFX sing 358 n n C07 H07 LFX sing 359 n n H08 C08 LFX sing 360 n n H08A C08 LFX sing 361 n n H09A C09 LFX sing 362 n n H09 C09 LFX sing 363 n n C13 C10 LFX doub 364 n y C10 C15 LFX sing 365 n n C11 C13 LFX sing 366 n y C12 C17 LFX doub 367 n n C12 H12 LFX sing 368 n n C13 H13 LFX sing 369 n n H14 C14 LFX sing 370 n n C14 H14A LFX sing 371 n n C14 H14B LFX sing 372 n n C15 C17 LFX sing 373 n n H16A C16 LFX sing 374 n n H16B C16 LFX sing 375 n n C16 H16 LFX sing 376 n n # _atom_sites.entry_id 4JUO _atom_sites.fract_transf_matrix[1][1] 0.004682 _atom_sites.fract_transf_matrix[1][2] 0.002703 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005406 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004721 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 7 MG A 1 501 100 MG MG . H 7 MG C 1 701 742 MG MG . I 8 LFX F 1 101 0 LFX LFX . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C LFX . . . I 8 55.488 -20.275 76.909 1 85.3 ? C LFX 101 F 1 HETATM 2 F F LFX . . . I 8 59.442 -14.023 77.503 1 104.41 ? F LFX 101 F 1 HETATM 3 N N LFX . . . I 8 57.719 -9.729 76.419 1 108.86 ? N LFX 101 F 1 HETATM 4 O O LFX . . . I 8 54.415 -20.597 76.331 1 95.62 ? O LFX 101 F 1 HETATM 5 C C01 LFX . . . I 8 58.645 -11.937 76.125 1 118.83 ? C01 LFX 101 F 1 HETATM 6 N N01 LFX . . . I 8 57.355 -12.526 76.513 1 95.51 ? N01 LFX 101 F 1 HETATM 7 O O01 LFX . . . I 8 55.11 -13.924 75.835 1 63.8 ? O01 LFX 101 F 1 HETATM 8 C C02 LFX . . . I 8 56.389 -11.628 77.154 1 80.2 ? C02 LFX 101 F 1 HETATM 9 N N02 LFX . . . I 8 54.884 -16.688 76.218 1 83.3 ? N02 LFX 101 F 1 HETATM 10 O O02 LFX . . . I 8 58.039 -18.995 77.725 1 63.2 ? O02 LFX 101 F 1 HETATM 11 C C03 LFX . . . I 8 53.717 -15.904 75.721 1 73.54 ? C03 LFX 101 F 1 HETATM 12 O O03 LFX . . . I 8 56.313 -21.065 77.518 1 82.96 ? O03 LFX 101 F 1 HETATM 13 C C04 LFX . . . I 8 57.26 -13.921 76.69 1 89.41 ? C04 LFX 101 F 1 HETATM 14 C C05 LFX . . . I 8 56.061 -16.044 76.557 1 81.77 ? C05 LFX 101 F 1 HETATM 15 C C06 LFX . . . I 8 56.115 -14.639 76.394 1 75.17 ? C06 LFX 101 F 1 HETATM 16 C C07 LFX . . . I 8 58.505 -10.558 75.532 1 123.4 ? C07 LFX 101 F 1 HETATM 17 C C08 LFX . . . I 8 56.377 -10.282 76.457 1 86.12 ? C08 LFX 101 F 1 HETATM 18 C C09 LFX . . . I 8 53.826 -14.463 76.122 1 71.57 ? C09 LFX 101 F 1 HETATM 19 C C10 LFX . . . I 8 57.138 -16.793 77.068 1 88.33 ? C10 LFX 101 F 1 HETATM 20 C C11 LFX . . . I 8 58.31 -14.707 77.196 1 100.44 ? C11 LFX 101 F 1 HETATM 21 C C12 LFX . . . I 8 54.803 -18.016 76.386 1 92.61 ? C12 LFX 101 F 1 HETATM 22 C C13 LFX . . . I 8 58.306 -16.069 77.366 1 101.31 ? C13 LFX 101 F 1 HETATM 23 C C14 LFX . . . I 8 52.396 -16.385 76.316 1 73.77 ? C14 LFX 101 F 1 HETATM 24 C C15 LFX . . . I 8 57.069 -18.28 77.257 1 76.99 ? C15 LFX 101 F 1 HETATM 25 C C16 LFX . . . I 8 57.737 -8.327 76.038 1 112.5 ? C16 LFX 101 F 1 HETATM 26 C C17 LFX . . . I 8 55.806 -18.826 76.868 1 85.35 ? C17 LFX 101 F 1 HETATM 27 H H01 LFX . . . I 8 59.22 -11.879 76.928 1 142.6 ? H01 LFX 101 F 1 HETATM 28 H H01A LFX . . . I 8 59.096 -12.532 75.475 1 142.6 ? H01A LFX 101 F 1 HETATM 29 H H02 LFX . . . I 8 55.485 -12.031 77.128 1 96.24 ? H02 LFX 101 F 1 HETATM 30 H H02A LFX . . . I 8 56.639 -11.501 78.103 1 96.24 ? H02A LFX 101 F 1 HETATM 31 H H03 LFX . . . I 8 53.69 -15.962 74.723 1 88.25 ? H03 LFX 101 F 1 HETATM 32 H H07 LFX . . . I 8 58.063 -10.615 74.648 1 148.07 ? H07 LFX 101 F 1 HETATM 33 H H07A LFX . . . I 8 59.402 -10.159 75.404 1 148.07 ? H07A LFX 101 F 1 HETATM 34 H H08 LFX . . . I 8 56.032 -10.384 75.535 1 103.34 ? H08 LFX 101 F 1 HETATM 35 H H08A LFX . . . I 8 55.776 -9.664 76.946 1 103.34 ? H08A LFX 101 F 1 HETATM 36 H H09 LFX . . . I 8 53.67 -14.39 77.097 1 85.89 ? H09 LFX 101 F 1 HETATM 37 H H09A LFX . . . I 8 53.124 -13.935 75.665 1 85.89 ? H09A LFX 101 F 1 HETATM 38 H H12 LFX . . . I 8 53.986 -18.436 76.142 1 111.13 ? H12 LFX 101 F 1 HETATM 39 H H13 LFX . . . I 8 59.064 -16.509 77.731 1 121.57 ? H13 LFX 101 F 1 HETATM 40 H H14 LFX . . . I 8 52.428 -16.305 77.292 1 88.53 ? H14 LFX 101 F 1 HETATM 41 H H14A LFX . . . I 8 51.662 -15.837 75.968 1 88.53 ? H14A LFX 101 F 1 HETATM 42 H H14B LFX . . . I 8 52.25 -17.322 76.07 1 88.53 ? H14B LFX 101 F 1 HETATM 43 H H16 LFX . . . I 8 57.36 -8.226 75.139 1 135 ? H16 LFX 101 F 1 HETATM 44 H H16A LFX . . . I 8 58.661 -7.998 76.044 1 135 ? H16A LFX 101 F 1 HETATM 45 H H16B LFX . . . I 8 57.203 -7.808 76.676 1 135 ? H16B LFX 101 F 1 # _model_server_stats.io_time_ms 127 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 45 #