data_4JV7 # _model_server_result.job_id o1sDGzFff1BurRcbUmuwhQ _model_server_result.datetime_utc '2025-04-03 07:52:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jv7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4JV7 # _exptl.entry_id 4JV7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 515.237 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S,5R,6S)-2-benzyl-5,6-bis(4-bromophenyl)-4-methylmorpholin-3-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4JV7 _cell.length_a 59.846 _cell.length_b 59.846 _cell.length_c 75.275 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JV7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H21 Br2 N O2' _chem_comp.formula_weight 515.237 _chem_comp.id 1MN _chem_comp.mon_nstd_flag . _chem_comp.name (2S,5R,6S)-2-benzyl-5,6-bis(4-bromophenyl)-4-methylmorpholin-3-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C15 C16 1MN doub 1 n y C15 C14 1MN sing 2 n y C16 C17 1MN sing 3 n y C14 C13 1MN doub 4 n y C17 C12 1MN doub 5 n y C13 C12 1MN sing 6 n y C12 C11 1MN sing 7 n n C11 C10 1MN sing 8 n n C10 C9 1MN sing 9 n n C10 O2 1MN sing 10 n n O1 C9 1MN doub 11 n n C9 N1 1MN sing 12 n n O2 C18 1MN sing 13 n n C18 C19 1MN sing 14 n n C18 C7 1MN sing 15 n n N1 C7 1MN sing 16 n n N1 C8 1MN sing 17 n n C19 C24 1MN doub 18 n y C19 C20 1MN sing 19 n y C24 C23 1MN sing 20 n y C7 C6 1MN sing 21 n n C20 C21 1MN doub 22 n y C23 C22 1MN doub 23 n y C21 C22 1MN sing 24 n y C22 BR2 1MN sing 25 n n C5 C6 1MN doub 26 n y C5 C4 1MN sing 27 n y C6 C3 1MN sing 28 n y C4 C1 1MN doub 29 n y C3 C2 1MN doub 30 n y C1 C2 1MN sing 31 n y C1 BR1 1MN sing 32 n n C3 H1 1MN sing 33 n n C2 H2 1MN sing 34 n n C4 H3 1MN sing 35 n n C5 H4 1MN sing 36 n n C7 H5 1MN sing 37 n n C8 H6 1MN sing 38 n n C8 H7 1MN sing 39 n n C8 H8 1MN sing 40 n n C10 H9 1MN sing 41 n n C11 H10 1MN sing 42 n n C11 H11 1MN sing 43 n n C13 H12 1MN sing 44 n n C14 H13 1MN sing 45 n n C15 H14 1MN sing 46 n n C16 H15 1MN sing 47 n n C17 H16 1MN sing 48 n n C18 H17 1MN sing 49 n n C20 H18 1MN sing 50 n n C21 H19 1MN sing 51 n n C23 H20 1MN sing 52 n n C24 H21 1MN sing 53 n n # _atom_sites.entry_id 4JV7 _atom_sites.fract_transf_matrix[1][1] 0.01671 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01671 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013285 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1MN A 1 201 1 1MN INH . C 3 SO4 A 1 202 3 SO4 SO4 . D 4 HOH A 1 301 4 HOH HOH . D 4 HOH A 2 302 5 HOH HOH . D 4 HOH A 3 303 6 HOH HOH . D 4 HOH A 4 304 8 HOH HOH . D 4 HOH A 5 305 11 HOH HOH . D 4 HOH A 6 306 12 HOH HOH . D 4 HOH A 7 307 13 HOH HOH . D 4 HOH A 8 308 14 HOH HOH . D 4 HOH A 9 309 15 HOH HOH . D 4 HOH A 10 310 17 HOH HOH . D 4 HOH A 11 311 19 HOH HOH . D 4 HOH A 12 312 20 HOH HOH . D 4 HOH A 13 313 29 HOH HOH . D 4 HOH A 14 314 33 HOH HOH . D 4 HOH A 15 315 34 HOH HOH . D 4 HOH A 16 316 37 HOH HOH . D 4 HOH A 17 317 38 HOH HOH . D 4 HOH A 18 318 39 HOH HOH . D 4 HOH A 19 319 40 HOH HOH . D 4 HOH A 20 320 46 HOH HOH . D 4 HOH A 21 321 49 HOH HOH . D 4 HOH A 22 322 50 HOH HOH . D 4 HOH A 23 323 51 HOH HOH . D 4 HOH A 24 324 52 HOH HOH . D 4 HOH A 25 325 53 HOH HOH . D 4 HOH A 26 326 54 HOH HOH . D 4 HOH A 27 327 55 HOH HOH . D 4 HOH A 28 328 56 HOH HOH . D 4 HOH A 29 329 60 HOH HOH . D 4 HOH A 30 330 62 HOH HOH . D 4 HOH A 31 331 63 HOH HOH . D 4 HOH A 32 332 64 HOH HOH . D 4 HOH A 33 333 66 HOH HOH . D 4 HOH A 34 334 68 HOH HOH . D 4 HOH A 35 335 69 HOH HOH . D 4 HOH A 36 336 72 HOH HOH . D 4 HOH A 37 337 73 HOH HOH . D 4 HOH A 38 338 75 HOH HOH . D 4 HOH A 39 339 76 HOH HOH . D 4 HOH A 40 340 79 HOH HOH . D 4 HOH A 41 341 84 HOH HOH . D 4 HOH A 42 342 86 HOH HOH . D 4 HOH A 43 343 90 HOH HOH . D 4 HOH A 44 344 91 HOH HOH . D 4 HOH A 45 345 93 HOH HOH . D 4 HOH A 46 346 97 HOH HOH . D 4 HOH A 47 347 101 HOH HOH . D 4 HOH A 48 348 102 HOH HOH . D 4 HOH A 49 349 103 HOH HOH . D 4 HOH A 50 350 104 HOH HOH . D 4 HOH A 51 351 105 HOH HOH . D 4 HOH A 52 352 109 HOH HOH . D 4 HOH A 53 353 113 HOH HOH . D 4 HOH A 54 354 114 HOH HOH . D 4 HOH A 55 355 115 HOH HOH . D 4 HOH A 56 356 120 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3 1MN . . . B 2 4.685 -33.547 1.086 1 18.75 ? C3 1MN 201 A 1 HETATM 2 C C2 1MN . . . B 2 5.501 -33.447 2.179 1 21.03 ? C2 1MN 201 A 1 HETATM 3 C C1 1MN . . . B 2 6.619 -32.64 2.039 1 21.67 ? C1 1MN 201 A 1 HETATM 4 BR BR1 1MN . . . B 2 7.908 -32.581 3.397 1 29.24 ? BR1 1MN 201 A 1 HETATM 5 C C4 1MN . . . B 2 6.89 -31.942 0.861 1 20.88 ? C4 1MN 201 A 1 HETATM 6 C C5 1MN . . . B 2 6.04 -32.056 -0.258 1 18.61 ? C5 1MN 201 A 1 HETATM 7 C C6 1MN . . . B 2 4.912 -32.89 -0.143 1 17.75 ? C6 1MN 201 A 1 HETATM 8 C C7 1MN . . . B 2 3.989 -33.078 -1.355 1 16.31 ? C7 1MN 201 A 1 HETATM 9 N N1 1MN . . . B 2 3.677 -31.827 -1.915 1 14.85 ? N1 1MN 201 A 1 HETATM 10 C C8 1MN . . . B 2 2.746 -30.959 -1.185 1 13.8 ? C8 1MN 201 A 1 HETATM 11 C C9 1MN . . . B 2 4.278 -31.468 -3.073 1 13.47 ? C9 1MN 201 A 1 HETATM 12 O O1 1MN . . . B 2 4.083 -30.354 -3.544 1 12.41 ? O1 1MN 201 A 1 HETATM 13 C C10 1MN . . . B 2 5.274 -32.455 -3.84 1 13.4 ? C10 1MN 201 A 1 HETATM 14 C C11 1MN . . . B 2 4.717 -32.733 -5.273 1 11.4 ? C11 1MN 201 A 1 HETATM 15 C C12 1MN . . . B 2 5.698 -33.386 -6.235 1 10.44 ? C12 1MN 201 A 1 HETATM 16 C C13 1MN . . . B 2 5.893 -34.789 -6.384 1 9.37 ? C13 1MN 201 A 1 HETATM 17 C C14 1MN . . . B 2 6.831 -35.274 -7.328 1 8.39 ? C14 1MN 201 A 1 HETATM 18 C C15 1MN . . . B 2 7.568 -34.38 -8.116 1 7.75 ? C15 1MN 201 A 1 HETATM 19 C C16 1MN . . . B 2 7.375 -33.006 -7.967 1 7.71 ? C16 1MN 201 A 1 HETATM 20 C C17 1MN . . . B 2 6.458 -32.518 -7.044 1 9.07 ? C17 1MN 201 A 1 HETATM 21 O O2 1MN . . . B 2 5.507 -33.621 -3.061 1 14.09 ? O2 1MN 201 A 1 HETATM 22 C C18 1MN . . . B 2 4.368 -34.126 -2.383 1 16.21 ? C18 1MN 201 A 1 HETATM 23 C C19 1MN . . . B 2 4.831 -35.415 -1.741 1 17.05 ? C19 1MN 201 A 1 HETATM 24 C C20 1MN . . . B 2 3.894 -36.332 -1.231 1 18.15 ? C20 1MN 201 A 1 HETATM 25 C C21 1MN . . . B 2 4.363 -37.529 -0.636 1 19.98 ? C21 1MN 201 A 1 HETATM 26 C C22 1MN . . . B 2 5.73 -37.76 -0.563 1 21.52 ? C22 1MN 201 A 1 HETATM 27 BR BR2 1MN . . . B 2 6.283 -39.241 0.389 1 29.65 ? BR2 1MN 201 A 1 HETATM 28 C C23 1MN . . . B 2 6.685 -36.878 -1.07 1 21.01 ? C23 1MN 201 A 1 HETATM 29 C C24 1MN . . . B 2 6.215 -35.708 -1.654 1 18.3 ? C24 1MN 201 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 650 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 29 #