data_4JV9 # _model_server_result.job_id YA1QbraPUxWWzJRfZmwE8g _model_server_result.datetime_utc '2024-10-12 16:33:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jv9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4JV9 # _exptl.entry_id 4JV9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 426.335 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S,5R,6S)-2-benzyl-5,6-bis(4-chlorophenyl)-4-methylmorpholin-3-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4JV9 _cell.length_a 59.848 _cell.length_b 59.848 _cell.length_c 75.248 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JV9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H21 Cl2 N O2' _chem_comp.formula_weight 426.335 _chem_comp.id 1MO _chem_comp.mon_nstd_flag . _chem_comp.name (2S,5R,6S)-2-benzyl-5,6-bis(4-chlorophenyl)-4-methylmorpholin-3-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C15 C16 1MO doub 1 n y C15 C14 1MO sing 2 n y C16 C17 1MO sing 3 n y C14 C13 1MO doub 4 n y C17 C12 1MO doub 5 n y C13 C12 1MO sing 6 n y C12 C11 1MO sing 7 n n C11 C10 1MO sing 8 n n C10 C9 1MO sing 9 n n C10 O2 1MO sing 10 n n O1 C9 1MO doub 11 n n C9 N1 1MO sing 12 n n O2 C18 1MO sing 13 n n C18 C19 1MO sing 14 n n C18 C7 1MO sing 15 n n N1 C7 1MO sing 16 n n N1 C8 1MO sing 17 n n C19 C24 1MO doub 18 n y C19 C20 1MO sing 19 n y C24 C23 1MO sing 20 n y C7 C6 1MO sing 21 n n C20 C21 1MO doub 22 n y C23 C22 1MO doub 23 n y C21 C22 1MO sing 24 n y C22 CL2 1MO sing 25 n n C5 C6 1MO doub 26 n y C5 C4 1MO sing 27 n y C6 C3 1MO sing 28 n y C4 C1 1MO doub 29 n y C3 C2 1MO doub 30 n y C1 C2 1MO sing 31 n y C1 CL1 1MO sing 32 n n C3 H1 1MO sing 33 n n C2 H2 1MO sing 34 n n C4 H3 1MO sing 35 n n C5 H4 1MO sing 36 n n C7 H5 1MO sing 37 n n C8 H6 1MO sing 38 n n C8 H7 1MO sing 39 n n C8 H8 1MO sing 40 n n C10 H9 1MO sing 41 n n C11 H10 1MO sing 42 n n C11 H11 1MO sing 43 n n C13 H12 1MO sing 44 n n C14 H13 1MO sing 45 n n C15 H14 1MO sing 46 n n C16 H15 1MO sing 47 n n C17 H16 1MO sing 48 n n C18 H17 1MO sing 49 n n C20 H18 1MO sing 50 n n C21 H19 1MO sing 51 n n C23 H20 1MO sing 52 n n C24 H21 1MO sing 53 n n # _atom_sites.entry_id 4JV9 _atom_sites.fract_transf_matrix[1][1] 0.016709 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016709 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013289 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1MO A 1 201 1 1MO INH . C 3 SO4 A 1 202 1 SO4 SO4 . D 3 SO4 A 1 203 3 SO4 SO4 . E 4 HOH A 1 301 2 HOH HOH . E 4 HOH A 2 302 4 HOH HOH . E 4 HOH A 3 303 14 HOH HOH . E 4 HOH A 4 304 26 HOH HOH . E 4 HOH A 5 305 28 HOH HOH . E 4 HOH A 6 306 29 HOH HOH . E 4 HOH A 7 307 30 HOH HOH . E 4 HOH A 8 308 31 HOH HOH . E 4 HOH A 9 309 32 HOH HOH . E 4 HOH A 10 310 33 HOH HOH . E 4 HOH A 11 311 34 HOH HOH . E 4 HOH A 12 312 35 HOH HOH . E 4 HOH A 13 313 36 HOH HOH . E 4 HOH A 14 314 37 HOH HOH . E 4 HOH A 15 315 38 HOH HOH . E 4 HOH A 16 316 39 HOH HOH . E 4 HOH A 17 317 40 HOH HOH . E 4 HOH A 18 318 41 HOH HOH . E 4 HOH A 19 319 44 HOH HOH . E 4 HOH A 20 320 48 HOH HOH . E 4 HOH A 21 321 51 HOH HOH . E 4 HOH A 22 322 53 HOH HOH . E 4 HOH A 23 323 54 HOH HOH . E 4 HOH A 24 324 56 HOH HOH . E 4 HOH A 25 325 59 HOH HOH . E 4 HOH A 26 326 65 HOH HOH . E 4 HOH A 27 327 66 HOH HOH . E 4 HOH A 28 328 68 HOH HOH . E 4 HOH A 29 329 71 HOH HOH . E 4 HOH A 30 330 74 HOH HOH . E 4 HOH A 31 331 76 HOH HOH . E 4 HOH A 32 332 78 HOH HOH . E 4 HOH A 33 333 80 HOH HOH . E 4 HOH A 34 334 81 HOH HOH . E 4 HOH A 35 335 83 HOH HOH . E 4 HOH A 36 336 85 HOH HOH . E 4 HOH A 37 337 86 HOH HOH . E 4 HOH A 38 338 88 HOH HOH . E 4 HOH A 39 339 89 HOH HOH . E 4 HOH A 40 340 92 HOH HOH . E 4 HOH A 41 341 93 HOH HOH . E 4 HOH A 42 342 96 HOH HOH . E 4 HOH A 43 343 97 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3 1MO . . . B 2 4.644 -33.568 1.079 1 22.78 ? C3 1MO 201 A 1 HETATM 2 C C2 1MO . . . B 2 5.531 -33.455 2.175 1 26.17 ? C2 1MO 201 A 1 HETATM 3 C C1 1MO . . . B 2 6.668 -32.66 2.064 1 26.62 ? C1 1MO 201 A 1 HETATM 4 CL CL1 1MO . . . B 2 7.814 -32.599 3.367 1 37.59 ? CL1 1MO 201 A 1 HETATM 5 C C4 1MO . . . B 2 6.898 -31.967 0.844 1 26.79 ? C4 1MO 201 A 1 HETATM 6 C C5 1MO . . . B 2 6.036 -32.07 -0.236 1 22.37 ? C5 1MO 201 A 1 HETATM 7 C C6 1MO . . . B 2 4.905 -32.88 -0.136 1 23.93 ? C6 1MO 201 A 1 HETATM 8 C C7 1MO . . . B 2 3.96 -33.091 -1.308 1 21.72 ? C7 1MO 201 A 1 HETATM 9 N N1 1MO . . . B 2 3.667 -31.83 -1.911 1 21.77 ? N1 1MO 201 A 1 HETATM 10 C C8 1MO . . . B 2 2.727 -30.956 -1.205 1 16.35 ? C8 1MO 201 A 1 HETATM 11 C C9 1MO . . . B 2 4.281 -31.455 -3.099 1 22.46 ? C9 1MO 201 A 1 HETATM 12 O O1 1MO . . . B 2 4.074 -30.344 -3.584 1 24.57 ? O1 1MO 201 A 1 HETATM 13 C C10 1MO . . . B 2 5.255 -32.453 -3.842 1 21.72 ? C10 1MO 201 A 1 HETATM 14 C C11 1MO . . . B 2 4.718 -32.766 -5.25 1 21.46 ? C11 1MO 201 A 1 HETATM 15 C C12 1MO . . . B 2 5.705 -33.39 -6.229 1 19.59 ? C12 1MO 201 A 1 HETATM 16 C C13 1MO . . . B 2 5.893 -34.78 -6.369 1 18.09 ? C13 1MO 201 A 1 HETATM 17 C C14 1MO . . . B 2 6.823 -35.275 -7.311 1 18.75 ? C14 1MO 201 A 1 HETATM 18 C C15 1MO . . . B 2 7.553 -34.382 -8.1 1 18.65 ? C15 1MO 201 A 1 HETATM 19 C C16 1MO . . . B 2 7.363 -33.011 -7.961 1 18.4 ? C16 1MO 201 A 1 HETATM 20 C C17 1MO . . . B 2 6.455 -32.526 -7.04 1 18.73 ? C17 1MO 201 A 1 HETATM 21 O O2 1MO . . . B 2 5.488 -33.608 -3.07 1 21.32 ? O2 1MO 201 A 1 HETATM 22 C C18 1MO . . . B 2 4.401 -34.143 -2.385 1 20.84 ? C18 1MO 201 A 1 HETATM 23 C C19 1MO . . . B 2 4.833 -35.432 -1.788 1 22.01 ? C19 1MO 201 A 1 HETATM 24 C C20 1MO . . . B 2 3.893 -36.351 -1.261 1 21.78 ? C20 1MO 201 A 1 HETATM 25 C C21 1MO . . . B 2 4.352 -37.524 -0.629 1 24.16 ? C21 1MO 201 A 1 HETATM 26 C C22 1MO . . . B 2 5.743 -37.803 -0.514 1 25.38 ? C22 1MO 201 A 1 HETATM 27 CL CL2 1MO . . . B 2 6.304 -39.185 0.3 1 32.36 ? CL2 1MO 201 A 1 HETATM 28 C C23 1MO . . . B 2 6.659 -36.881 -1.055 1 24.62 ? C23 1MO 201 A 1 HETATM 29 C C24 1MO . . . B 2 6.22 -35.71 -1.689 1 21.5 ? C24 1MO 201 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 29 #