data_4JWS # _model_server_result.job_id -hEOeilPDZW7hJ8nWwoRgQ _model_server_result.datetime_utc '2024-11-15 06:57:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jws # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":502}' # _entry.id 4JWS # _exptl.entry_id 4JWS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.91 _cell.angle_gamma 90 _cell.entry_id 4JWS _cell.length_a 57.59 _cell.length_b 106.72 _cell.length_c 88.7 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JWS _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,K,M,O 1 1 B,D,H,I,J,L,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NE2 HIS 356 A HIS 355 1_555 G C2 1N0 . A 1N0 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.508 ? covale ? covale2 G C16 1N0 . A 1N0 503 1_555 C SG CYS 79 C CYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.793 ? covale ? covale3 B NE2 HIS 356 B HIS 355 1_555 J C2 1N0 . B 1N0 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.508 ? covale ? covale4 J C16 1N0 . B 1N0 503 1_555 D SG CYS 79 D CYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.799 ? metalc ? metalc1 A OE2 GLU 199 A GLU 198 1_555 F CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc2 A OD2 ASP 203 A ASP 202 1_555 F CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc3 A OD1 ASP 203 A ASP 202 1_555 F CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc4 A SG CYS 358 A CYS 357 1_555 E FE HEM . A HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc5 E FE HEM . A HEM 501 1_555 M O HOH . A HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc6 F CA CA . A CA 502 1_555 B O ALA 37 B ALA 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.667 ? metalc ? metalc7 B OE2 GLU 199 B GLU 198 1_555 I CA CA . B CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc8 B OD1 ASP 203 B ASP 202 1_555 I CA CA . B CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? metalc ? metalc9 B OD2 ASP 203 B ASP 202 1_555 I CA CA . B CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? metalc ? metalc10 B SG CYS 358 B CYS 357 1_555 H FE HEM . B HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc11 C SG CYS 45 C CYS 39 1_555 K FE1 FES . C FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc12 C SG CYS 51 C CYS 45 1_555 K FE1 FES . C FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc13 C SG CYS 54 C CYS 48 1_555 K FE2 FES . C FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc14 C SG CYS 92 C CYS 86 1_555 K FE2 FES . C FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc15 D SG CYS 45 D CYS 39 1_555 L FE1 FES . D FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc16 D SG CYS 51 D CYS 45 1_555 L FE1 FES . D FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc17 D SG CYS 54 D CYS 48 1_555 L FE2 FES . D FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc18 D SG CYS 92 D CYS 86 1_555 L FE2 FES . D FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4JWS _atom_sites.fract_transf_matrix[1][1] 0.017364 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005612 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00937 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011848 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HEM A 1 501 417 HEM HEM . F 4 CA A 1 502 418 CA CA . G 5 1N0 A 1 503 1 1N0 1N0 . H 3 HEM B 1 501 417 HEM HEM . I 4 CA B 1 502 418 CA CA . J 5 1N0 B 1 503 1 1N0 1N0 . K 6 FES C 1 201 107 FES FES . L 6 FES D 1 201 107 FES FES . M 7 HOH A 1 601 1 HOH HOH . M 7 HOH A 2 602 2 HOH HOH . M 7 HOH A 3 603 4 HOH HOH . M 7 HOH A 4 604 6 HOH HOH . M 7 HOH A 5 605 7 HOH HOH . M 7 HOH A 6 606 8 HOH HOH . M 7 HOH A 7 607 9 HOH HOH . M 7 HOH A 8 608 10 HOH HOH . M 7 HOH A 9 609 12 HOH HOH . M 7 HOH A 10 610 15 HOH HOH . M 7 HOH A 11 611 16 HOH HOH . M 7 HOH A 12 612 17 HOH HOH . M 7 HOH A 13 613 18 HOH HOH . M 7 HOH A 14 614 20 HOH HOH . M 7 HOH A 15 615 21 HOH HOH . M 7 HOH A 16 616 23 HOH HOH . M 7 HOH A 17 617 24 HOH HOH . M 7 HOH A 18 618 25 HOH HOH . M 7 HOH A 19 619 28 HOH HOH . M 7 HOH A 20 620 31 HOH HOH . M 7 HOH A 21 621 32 HOH HOH . M 7 HOH A 22 622 33 HOH HOH . M 7 HOH A 23 623 37 HOH HOH . M 7 HOH A 24 624 39 HOH HOH . M 7 HOH A 25 625 41 HOH HOH . M 7 HOH A 26 626 42 HOH HOH . M 7 HOH A 27 627 44 HOH HOH . M 7 HOH A 28 628 46 HOH HOH . M 7 HOH A 29 629 48 HOH HOH . M 7 HOH A 30 630 49 HOH HOH . M 7 HOH A 31 631 50 HOH HOH . M 7 HOH A 32 632 51 HOH HOH . M 7 HOH A 33 633 52 HOH HOH . M 7 HOH A 34 634 53 HOH HOH . M 7 HOH A 35 635 54 HOH HOH . M 7 HOH A 36 636 57 HOH HOH . M 7 HOH A 37 637 59 HOH HOH . M 7 HOH A 38 638 61 HOH HOH . M 7 HOH A 39 639 64 HOH HOH . M 7 HOH A 40 640 68 HOH HOH . M 7 HOH A 41 641 69 HOH HOH . M 7 HOH A 42 642 70 HOH HOH . M 7 HOH A 43 643 71 HOH HOH . M 7 HOH A 44 644 78 HOH HOH . M 7 HOH A 45 645 80 HOH HOH . M 7 HOH A 46 646 81 HOH HOH . M 7 HOH A 47 647 82 HOH HOH . M 7 HOH A 48 648 83 HOH HOH . M 7 HOH A 49 649 86 HOH HOH . M 7 HOH A 50 650 88 HOH HOH . M 7 HOH A 51 651 93 HOH HOH . M 7 HOH A 52 652 95 HOH HOH . M 7 HOH A 53 653 97 HOH HOH . M 7 HOH A 54 654 99 HOH HOH . M 7 HOH A 55 655 101 HOH HOH . M 7 HOH A 56 656 102 HOH HOH . M 7 HOH A 57 657 109 HOH HOH . M 7 HOH A 58 658 113 HOH HOH . M 7 HOH A 59 659 116 HOH HOH . M 7 HOH A 60 660 120 HOH HOH . M 7 HOH A 61 661 121 HOH HOH . M 7 HOH A 62 662 129 HOH HOH . M 7 HOH A 63 663 132 HOH HOH . M 7 HOH A 64 664 137 HOH HOH . M 7 HOH A 65 665 144 HOH HOH . M 7 HOH A 66 666 145 HOH HOH . M 7 HOH A 67 667 147 HOH HOH . M 7 HOH A 68 668 148 HOH HOH . M 7 HOH A 69 669 149 HOH HOH . M 7 HOH A 70 670 150 HOH HOH . M 7 HOH A 71 671 151 HOH HOH . M 7 HOH A 72 672 152 HOH HOH . M 7 HOH A 73 673 154 HOH HOH . M 7 HOH A 74 674 155 HOH HOH . M 7 HOH A 75 675 156 HOH HOH . M 7 HOH A 76 676 157 HOH HOH . M 7 HOH A 77 677 161 HOH HOH . M 7 HOH A 78 678 162 HOH HOH . M 7 HOH A 79 679 163 HOH HOH . M 7 HOH A 80 680 166 HOH HOH . M 7 HOH A 81 681 171 HOH HOH . M 7 HOH A 82 682 174 HOH HOH . M 7 HOH A 83 683 178 HOH HOH . M 7 HOH A 84 684 181 HOH HOH . M 7 HOH A 85 685 182 HOH HOH . M 7 HOH A 86 686 184 HOH HOH . M 7 HOH A 87 687 187 HOH HOH . M 7 HOH A 88 688 191 HOH HOH . M 7 HOH A 89 689 192 HOH HOH . M 7 HOH A 90 690 193 HOH HOH . M 7 HOH A 91 691 203 HOH HOH . M 7 HOH A 92 692 205 HOH HOH . M 7 HOH A 93 693 217 HOH HOH . M 7 HOH A 94 694 219 HOH HOH . M 7 HOH A 95 695 220 HOH HOH . M 7 HOH A 96 696 223 HOH HOH . M 7 HOH A 97 697 226 HOH HOH . M 7 HOH A 98 698 227 HOH HOH . M 7 HOH A 99 699 228 HOH HOH . M 7 HOH A 100 700 229 HOH HOH . M 7 HOH A 101 701 230 HOH HOH . N 7 HOH B 1 601 11 HOH HOH . N 7 HOH B 2 602 13 HOH HOH . N 7 HOH B 3 603 19 HOH HOH . N 7 HOH B 4 604 26 HOH HOH . N 7 HOH B 5 605 27 HOH HOH . N 7 HOH B 6 606 29 HOH HOH . N 7 HOH B 7 607 30 HOH HOH . N 7 HOH B 8 608 35 HOH HOH . N 7 HOH B 9 609 40 HOH HOH . N 7 HOH B 10 610 43 HOH HOH . N 7 HOH B 11 611 45 HOH HOH . N 7 HOH B 12 612 58 HOH HOH . N 7 HOH B 13 613 60 HOH HOH . N 7 HOH B 14 614 62 HOH HOH . N 7 HOH B 15 615 63 HOH HOH . N 7 HOH B 16 616 65 HOH HOH . N 7 HOH B 17 617 66 HOH HOH . N 7 HOH B 18 618 67 HOH HOH . N 7 HOH B 19 619 72 HOH HOH . N 7 HOH B 20 620 74 HOH HOH . N 7 HOH B 21 621 75 HOH HOH . N 7 HOH B 22 622 77 HOH HOH . N 7 HOH B 23 623 84 HOH HOH . N 7 HOH B 24 624 85 HOH HOH . N 7 HOH B 25 625 87 HOH HOH . N 7 HOH B 26 626 89 HOH HOH . N 7 HOH B 27 627 91 HOH HOH . N 7 HOH B 28 628 92 HOH HOH . N 7 HOH B 29 629 96 HOH HOH . N 7 HOH B 30 630 100 HOH HOH . N 7 HOH B 31 631 107 HOH HOH . N 7 HOH B 32 632 108 HOH HOH . N 7 HOH B 33 633 111 HOH HOH . N 7 HOH B 34 634 114 HOH HOH . N 7 HOH B 35 635 117 HOH HOH . N 7 HOH B 36 636 118 HOH HOH . N 7 HOH B 37 637 119 HOH HOH . N 7 HOH B 38 638 122 HOH HOH . N 7 HOH B 39 639 123 HOH HOH . N 7 HOH B 40 640 133 HOH HOH . N 7 HOH B 41 641 134 HOH HOH . N 7 HOH B 42 642 136 HOH HOH . N 7 HOH B 43 643 138 HOH HOH . N 7 HOH B 44 644 139 HOH HOH . N 7 HOH B 45 645 140 HOH HOH . N 7 HOH B 46 646 141 HOH HOH . N 7 HOH B 47 647 142 HOH HOH . N 7 HOH B 48 648 143 HOH HOH . N 7 HOH B 49 649 146 HOH HOH . N 7 HOH B 50 650 153 HOH HOH . N 7 HOH B 51 651 159 HOH HOH . N 7 HOH B 52 652 160 HOH HOH . N 7 HOH B 53 653 164 HOH HOH . N 7 HOH B 54 654 165 HOH HOH . N 7 HOH B 55 655 169 HOH HOH . N 7 HOH B 56 656 170 HOH HOH . N 7 HOH B 57 657 172 HOH HOH . N 7 HOH B 58 658 173 HOH HOH . N 7 HOH B 59 659 176 HOH HOH . N 7 HOH B 60 660 177 HOH HOH . N 7 HOH B 61 661 183 HOH HOH . N 7 HOH B 62 662 185 HOH HOH . N 7 HOH B 63 663 186 HOH HOH . N 7 HOH B 64 664 188 HOH HOH . N 7 HOH B 65 665 189 HOH HOH . N 7 HOH B 66 666 194 HOH HOH . N 7 HOH B 67 667 195 HOH HOH . N 7 HOH B 68 668 196 HOH HOH . N 7 HOH B 69 669 198 HOH HOH . N 7 HOH B 70 670 199 HOH HOH . N 7 HOH B 71 671 200 HOH HOH . N 7 HOH B 72 672 201 HOH HOH . N 7 HOH B 73 673 202 HOH HOH . N 7 HOH B 74 674 206 HOH HOH . N 7 HOH B 75 675 207 HOH HOH . N 7 HOH B 76 676 208 HOH HOH . N 7 HOH B 77 677 209 HOH HOH . N 7 HOH B 78 678 211 HOH HOH . N 7 HOH B 79 679 213 HOH HOH . N 7 HOH B 80 680 214 HOH HOH . N 7 HOH B 81 681 216 HOH HOH . N 7 HOH B 82 682 218 HOH HOH . N 7 HOH B 83 683 221 HOH HOH . N 7 HOH B 84 684 224 HOH HOH . N 7 HOH B 85 685 231 HOH HOH . O 7 HOH C 1 301 3 HOH HOH . O 7 HOH C 2 302 5 HOH HOH . O 7 HOH C 3 303 14 HOH HOH . O 7 HOH C 4 304 34 HOH HOH . O 7 HOH C 5 305 47 HOH HOH . O 7 HOH C 6 306 79 HOH HOH . O 7 HOH C 7 307 90 HOH HOH . O 7 HOH C 8 308 94 HOH HOH . O 7 HOH C 9 309 98 HOH HOH . O 7 HOH C 10 310 103 HOH HOH . O 7 HOH C 11 311 110 HOH HOH . O 7 HOH C 12 312 112 HOH HOH . O 7 HOH C 13 313 115 HOH HOH . O 7 HOH C 14 314 125 HOH HOH . O 7 HOH C 15 315 126 HOH HOH . O 7 HOH C 16 316 127 HOH HOH . O 7 HOH C 17 317 130 HOH HOH . O 7 HOH C 18 318 135 HOH HOH . O 7 HOH C 19 319 158 HOH HOH . O 7 HOH C 20 320 179 HOH HOH . O 7 HOH C 21 321 180 HOH HOH . O 7 HOH C 22 322 190 HOH HOH . O 7 HOH C 23 323 204 HOH HOH . O 7 HOH C 24 324 212 HOH HOH . O 7 HOH C 25 325 225 HOH HOH . P 7 HOH D 1 301 22 HOH HOH . P 7 HOH D 2 302 36 HOH HOH . P 7 HOH D 3 303 38 HOH HOH . P 7 HOH D 4 304 55 HOH HOH . P 7 HOH D 5 305 56 HOH HOH . P 7 HOH D 6 306 73 HOH HOH . P 7 HOH D 7 307 76 HOH HOH . P 7 HOH D 8 308 104 HOH HOH . P 7 HOH D 9 309 105 HOH HOH . P 7 HOH D 10 310 106 HOH HOH . P 7 HOH D 11 311 124 HOH HOH . P 7 HOH D 12 312 128 HOH HOH . P 7 HOH D 13 313 131 HOH HOH . P 7 HOH D 14 314 167 HOH HOH . P 7 HOH D 15 315 168 HOH HOH . P 7 HOH D 16 316 175 HOH HOH . P 7 HOH D 17 317 197 HOH HOH . P 7 HOH D 18 318 210 HOH HOH . P 7 HOH D 19 319 215 HOH HOH . P 7 HOH D 20 320 222 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x 19.739 _atom_site.Cartn_y -17.411 _atom_site.Cartn_z 15.222 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 54.73 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 502 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 40 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 348 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #