data_4JX7 # _model_server_result.job_id saIGVbNUn6F4NBvV3xP1Tg _model_server_result.datetime_utc '2025-02-05 07:46:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jx7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 4JX7 # _exptl.entry_id 4JX7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 418.416 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[(trans-4-aminocyclohexyl)amino]-4-{[3-(trifluoromethyl)phenyl]amino}pyrido[4,3-d]pyrimidin-5(6H)-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4JX7 _cell.length_a 97.657 _cell.length_b 97.657 _cell.length_c 81.106 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JX7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H21 F3 N6 O' _chem_comp.formula_weight 418.416 _chem_comp.id 1N6 _chem_comp.mon_nstd_flag . _chem_comp.name 2-[(trans-4-aminocyclohexyl)amino]-4-{[3-(trifluoromethyl)phenyl]amino}pyrido[4,3-d]pyrimidin-5(6H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag NAA CBB 1N6 sing 1 n n CBB CAL 1N6 sing 2 n n CBB CAM 1N6 sing 3 n n FAC CBD 1N6 sing 4 n n FAE CBD 1N6 sing 5 n n CAL CAN 1N6 sing 6 n n CAM CAO 1N6 sing 7 n n CBD FAD 1N6 sing 8 n n CBD CAV 1N6 sing 9 n n CAN CBC 1N6 sing 10 n n CAV CAI 1N6 doub 11 n y CAV CAK 1N6 sing 12 n y CAI CAF 1N6 sing 13 n y CAO CBC 1N6 sing 14 n n CBC NAS 1N6 sing 15 n n CAK CAU 1N6 doub 16 n y CAF CAH 1N6 doub 17 n y NAS C2 1N6 sing 18 n n CAU CAH 1N6 sing 19 n y CAU NAR 1N6 sing 20 n n N1 C2 1N6 doub 21 n y N1 C6 1N6 sing 22 n y C2 N3 1N6 sing 23 n y NAR C6 1N6 sing 24 n n C6 C5 1N6 doub 25 n y N3 C4 1N6 doub 26 n y C5 C4 1N6 sing 27 n y C5 CAY 1N6 sing 28 n n C4 CAJ 1N6 sing 29 n n OAB CAY 1N6 doub 30 n n CAY NAT 1N6 sing 31 n n CAJ CAG 1N6 doub 32 n n NAT CAG 1N6 sing 33 n n CAK H1 1N6 sing 34 n n CAI H2 1N6 sing 35 n n CAF H3 1N6 sing 36 n n CAH H4 1N6 sing 37 n n NAR H5 1N6 sing 38 n n CAG H6 1N6 sing 39 n n CAJ H7 1N6 sing 40 n n NAS H9 1N6 sing 41 n n CBC H10 1N6 sing 42 n n CAN H11 1N6 sing 43 n n CAN H12 1N6 sing 44 n n CAL H13 1N6 sing 45 n n CAL H14 1N6 sing 46 n n CBB H15 1N6 sing 47 n n NAA H16 1N6 sing 48 n n NAA H17 1N6 sing 49 n n CAM H19 1N6 sing 50 n n CAM H20 1N6 sing 51 n n CAO H21 1N6 sing 52 n n CAO H22 1N6 sing 53 n n NAT H23 1N6 sing 54 n n # _atom_sites.entry_id 4JX7 _atom_sites.fract_transf_matrix[1][1] 0.01024 _atom_sites.fract_transf_matrix[1][2] 0.005912 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011824 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01233 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 1N6 A 1 401 1 1N6 DRG . D 4 HOH A 1 501 1 HOH HOH . D 4 HOH A 2 502 2 HOH HOH . D 4 HOH A 3 503 3 HOH HOH . D 4 HOH A 4 504 4 HOH HOH . D 4 HOH A 5 505 6 HOH HOH . D 4 HOH A 6 506 7 HOH HOH . D 4 HOH A 7 507 8 HOH HOH . D 4 HOH A 8 508 9 HOH HOH . D 4 HOH A 9 509 12 HOH HOH . D 4 HOH A 10 510 13 HOH HOH . D 4 HOH A 11 511 14 HOH HOH . D 4 HOH A 12 512 15 HOH HOH . D 4 HOH A 13 513 16 HOH HOH . D 4 HOH A 14 514 17 HOH HOH . D 4 HOH A 15 515 18 HOH HOH . D 4 HOH A 16 516 19 HOH HOH . D 4 HOH A 17 517 20 HOH HOH . D 4 HOH A 18 518 21 HOH HOH . D 4 HOH A 19 519 22 HOH HOH . D 4 HOH A 20 520 23 HOH HOH . D 4 HOH A 21 521 24 HOH HOH . D 4 HOH A 22 522 25 HOH HOH . D 4 HOH A 23 523 26 HOH HOH . D 4 HOH A 24 524 27 HOH HOH . D 4 HOH A 25 525 28 HOH HOH . D 4 HOH A 26 526 29 HOH HOH . D 4 HOH A 27 527 30 HOH HOH . D 4 HOH A 28 528 32 HOH HOH . D 4 HOH A 29 529 33 HOH HOH . D 4 HOH A 30 530 34 HOH HOH . D 4 HOH A 31 531 35 HOH HOH . D 4 HOH A 32 532 36 HOH HOH . D 4 HOH A 33 533 37 HOH HOH . D 4 HOH A 34 534 39 HOH HOH . D 4 HOH A 35 535 40 HOH HOH . D 4 HOH A 36 536 41 HOH HOH . D 4 HOH A 37 537 42 HOH HOH . D 4 HOH A 38 538 43 HOH HOH . D 4 HOH A 39 539 45 HOH HOH . D 4 HOH A 40 540 46 HOH HOH . D 4 HOH A 41 541 47 HOH HOH . D 4 HOH A 42 542 48 HOH HOH . D 4 HOH A 43 543 49 HOH HOH . D 4 HOH A 44 544 50 HOH HOH . D 4 HOH A 45 545 52 HOH HOH . D 4 HOH A 46 546 53 HOH HOH . D 4 HOH A 47 547 54 HOH HOH . D 4 HOH A 48 548 56 HOH HOH . D 4 HOH A 49 549 58 HOH HOH . D 4 HOH A 50 550 59 HOH HOH . D 4 HOH A 51 551 60 HOH HOH . D 4 HOH A 52 552 61 HOH HOH . D 4 HOH A 53 553 62 HOH HOH . D 4 HOH A 54 554 65 HOH HOH . D 4 HOH A 55 555 66 HOH HOH . D 4 HOH A 56 556 67 HOH HOH . D 4 HOH A 57 557 68 HOH HOH . D 4 HOH A 58 558 69 HOH HOH . D 4 HOH A 59 559 70 HOH HOH . D 4 HOH A 60 560 72 HOH HOH . D 4 HOH A 61 561 73 HOH HOH . D 4 HOH A 62 562 75 HOH HOH . D 4 HOH A 63 563 77 HOH HOH . D 4 HOH A 64 564 78 HOH HOH . D 4 HOH A 65 565 81 HOH HOH . D 4 HOH A 66 566 83 HOH HOH . D 4 HOH A 67 567 86 HOH HOH . D 4 HOH A 68 568 87 HOH HOH . D 4 HOH A 69 569 89 HOH HOH . D 4 HOH A 70 570 92 HOH HOH . D 4 HOH A 71 571 95 HOH HOH . D 4 HOH A 72 572 96 HOH HOH . D 4 HOH A 73 573 97 HOH HOH . D 4 HOH A 74 574 98 HOH HOH . D 4 HOH A 75 575 101 HOH HOH . D 4 HOH A 76 576 102 HOH HOH . D 4 HOH A 77 577 103 HOH HOH . D 4 HOH A 78 578 104 HOH HOH . D 4 HOH A 79 579 105 HOH HOH . D 4 HOH A 80 580 106 HOH HOH . D 4 HOH A 81 581 107 HOH HOH . D 4 HOH A 82 582 109 HOH HOH . D 4 HOH A 83 583 110 HOH HOH . D 4 HOH A 84 584 111 HOH HOH . D 4 HOH A 85 585 112 HOH HOH . D 4 HOH A 86 586 114 HOH HOH . D 4 HOH A 87 587 118 HOH HOH . D 4 HOH A 88 588 119 HOH HOH . D 4 HOH A 89 589 120 HOH HOH . D 4 HOH A 90 590 122 HOH HOH . D 4 HOH A 91 591 123 HOH HOH . D 4 HOH A 92 592 124 HOH HOH . D 4 HOH A 93 593 125 HOH HOH . D 4 HOH A 94 594 126 HOH HOH . D 4 HOH A 95 595 127 HOH HOH . D 4 HOH A 96 596 128 HOH HOH . D 4 HOH A 97 597 129 HOH HOH . D 4 HOH A 98 598 130 HOH HOH . D 4 HOH A 99 599 131 HOH HOH . D 4 HOH A 100 600 132 HOH HOH . D 4 HOH A 101 601 133 HOH HOH . D 4 HOH A 102 602 134 HOH HOH . D 4 HOH A 103 603 135 HOH HOH . D 4 HOH A 104 604 136 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F FAC 1N6 . . . C 3 22.286 -41.621 -5.878 1 66.62 ? FAC 1N6 401 A 1 HETATM 2 C CBD 1N6 . . . C 3 21.59 -40.857 -4.947 1 62.26 ? CBD 1N6 401 A 1 HETATM 3 F FAD 1N6 . . . C 3 20.403 -41.423 -4.758 1 69.42 ? FAD 1N6 401 A 1 HETATM 4 F FAE 1N6 . . . C 3 21.396 -39.557 -5.406 1 63.89 ? FAE 1N6 401 A 1 HETATM 5 C CAV 1N6 . . . C 3 22.303 -40.813 -3.73 1 57.87 ? CAV 1N6 401 A 1 HETATM 6 C CAK 1N6 . . . C 3 21.637 -40.409 -2.559 1 51.99 ? CAK 1N6 401 A 1 HETATM 7 C CAI 1N6 . . . C 3 23.664 -41.163 -3.683 1 53.95 ? CAI 1N6 401 A 1 HETATM 8 C CAF 1N6 . . . C 3 24.35 -41.113 -2.467 1 55.14 ? CAF 1N6 401 A 1 HETATM 9 C CAH 1N6 . . . C 3 23.667 -40.711 -1.304 1 50.48 ? CAH 1N6 401 A 1 HETATM 10 C CAU 1N6 . . . C 3 22.314 -40.341 -1.338 1 47.17 ? CAU 1N6 401 A 1 HETATM 11 N NAR 1N6 . . . C 3 21.71 -39.99 -0.184 1 42.96 ? NAR 1N6 401 A 1 HETATM 12 C C6 1N6 . . . C 3 20.855 -38.949 -0.016 1 39.38 ? C6 1N6 401 A 1 HETATM 13 N N1 1N6 . . . C 3 20.318 -38.192 -1.021 1 40.2 ? N1 1N6 401 A 1 HETATM 14 C C5 1N6 . . . C 3 20.517 -38.67 1.326 1 36.9 ? C5 1N6 401 A 1 HETATM 15 C CAY 1N6 . . . C 3 21.013 -39.405 2.431 1 37.35 ? CAY 1N6 401 A 1 HETATM 16 O OAB 1N6 . . . C 3 21.8 -40.359 2.286 1 37.72 ? OAB 1N6 401 A 1 HETATM 17 N NAT 1N6 . . . C 3 20.594 -39.047 3.747 1 33.77 ? NAT 1N6 401 A 1 HETATM 18 C CAG 1N6 . . . C 3 19.754 -38.038 3.954 1 32.29 ? CAG 1N6 401 A 1 HETATM 19 C CAJ 1N6 . . . C 3 19.256 -37.3 2.891 1 32.92 ? CAJ 1N6 401 A 1 HETATM 20 C C4 1N6 . . . C 3 19.632 -37.616 1.585 1 36.52 ? C4 1N6 401 A 1 HETATM 21 N N3 1N6 . . . C 3 19.137 -36.9 0.562 1 37.28 ? N3 1N6 401 A 1 HETATM 22 C C2 1N6 . . . C 3 19.454 -37.183 -0.725 1 38.69 ? C2 1N6 401 A 1 HETATM 23 N NAS 1N6 . . . C 3 18.894 -36.349 -1.61 1 39.84 ? NAS 1N6 401 A 1 HETATM 24 C CBC 1N6 . . . C 3 18.395 -36.519 -2.982 1 42.25 ? CBC 1N6 401 A 1 HETATM 25 C CAN 1N6 . . . C 3 19.189 -35.533 -3.851 1 43.71 ? CAN 1N6 401 A 1 HETATM 26 C CAL 1N6 . . . C 3 18.577 -35.466 -5.247 1 43.93 ? CAL 1N6 401 A 1 HETATM 27 C CBB 1N6 . . . C 3 18.631 -36.856 -5.891 1 43.56 ? CBB 1N6 401 A 1 HETATM 28 N NAA 1N6 . . . C 3 18.068 -36.785 -7.234 1 41.35 ? NAA 1N6 401 A 1 HETATM 29 C CAM 1N6 . . . C 3 17.944 -37.953 -5.013 1 42.94 ? CAM 1N6 401 A 1 HETATM 30 C CAO 1N6 . . . C 3 18.461 -37.94 -3.559 1 44.13 ? CAO 1N6 401 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 30 #