data_4JYC # _model_server_result.job_id nkw7Rjo__pp_WhiZSvl6cQ _model_server_result.datetime_utc '2024-11-22 14:48:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jyc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 4JYC # _exptl.entry_id 4JYC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.07 _cell.angle_gamma 90 _cell.entry_id 4JYC _cell.length_a 185.463 _cell.length_b 58.377 _cell.length_c 155.28 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JYC _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,I 1 1 B,C,G,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 83 n n PB O2B GDP sing 84 n n PB O3B GDP sing 85 n n PB O3A GDP sing 86 n n O2B HOB2 GDP sing 87 n n O3B HOB3 GDP sing 88 n n O3A PA GDP sing 89 n n PA O1A GDP doub 90 n n PA O2A GDP sing 91 n n PA O5' GDP sing 92 n n O2A HOA2 GDP sing 93 n n O5' C5' GDP sing 94 n n C5' C4' GDP sing 95 n n C5' H5' GDP sing 96 n n C5' "H5''" GDP sing 97 n n C4' O4' GDP sing 98 n n C4' C3' GDP sing 99 n n C4' H4' GDP sing 100 n n O4' C1' GDP sing 101 n n C3' O3' GDP sing 102 n n C3' C2' GDP sing 103 n n C3' H3' GDP sing 104 n n O3' HO3' GDP sing 105 n n C2' O2' GDP sing 106 n n C2' C1' GDP sing 107 n n C2' H2' GDP sing 108 n n O2' HO2' GDP sing 109 n n C1' N9 GDP sing 110 n n C1' H1' GDP sing 111 n n N9 C8 GDP sing 112 n y N9 C4 GDP sing 113 n y C8 N7 GDP doub 114 n y C8 H8 GDP sing 115 n n N7 C5 GDP sing 116 n y C5 C6 GDP sing 117 n n C5 C4 GDP doub 118 n y C6 O6 GDP doub 119 n n C6 N1 GDP sing 120 n n N1 C2 GDP sing 121 n n N1 HN1 GDP sing 122 n n C2 N2 GDP sing 123 n n C2 N3 GDP doub 124 n n N2 HN21 GDP sing 125 n n N2 HN22 GDP sing 126 n n N3 C4 GDP sing 127 n n # _atom_sites.entry_id 4JYC _atom_sites.fract_transf_matrix[1][1] 0.005392 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00197 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01713 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006856 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GDP D 1 501 501 GDP GDP . F 3 HOH A 1 401 3 HOH HOH . F 3 HOH A 2 402 11 HOH HOH . F 3 HOH A 3 403 22 HOH HOH . F 3 HOH A 4 404 23 HOH HOH . F 3 HOH A 5 405 25 HOH HOH . F 3 HOH A 6 406 30 HOH HOH . F 3 HOH A 7 407 31 HOH HOH . F 3 HOH A 8 408 33 HOH HOH . F 3 HOH A 9 409 36 HOH HOH . F 3 HOH A 10 410 44 HOH HOH . F 3 HOH A 11 411 52 HOH HOH . F 3 HOH A 12 412 54 HOH HOH . F 3 HOH A 13 413 57 HOH HOH . F 3 HOH A 14 414 65 HOH HOH . F 3 HOH A 15 415 66 HOH HOH . F 3 HOH A 16 416 71 HOH HOH . F 3 HOH A 17 417 82 HOH HOH . F 3 HOH A 18 418 88 HOH HOH . F 3 HOH A 19 419 97 HOH HOH . F 3 HOH A 20 420 102 HOH HOH . F 3 HOH A 21 421 110 HOH HOH . F 3 HOH A 22 422 116 HOH HOH . F 3 HOH A 23 423 117 HOH HOH . F 3 HOH A 24 424 123 HOH HOH . F 3 HOH A 25 425 126 HOH HOH . F 3 HOH A 26 426 137 HOH HOH . F 3 HOH A 27 427 143 HOH HOH . F 3 HOH A 28 428 147 HOH HOH . F 3 HOH A 29 429 148 HOH HOH . F 3 HOH A 30 430 157 HOH HOH . F 3 HOH A 31 431 158 HOH HOH . F 3 HOH A 32 432 160 HOH HOH . F 3 HOH A 33 433 161 HOH HOH . F 3 HOH A 34 434 171 HOH HOH . F 3 HOH A 35 435 172 HOH HOH . F 3 HOH A 36 436 196 HOH HOH . F 3 HOH A 37 437 197 HOH HOH . F 3 HOH A 38 438 198 HOH HOH . F 3 HOH A 39 439 219 HOH HOH . F 3 HOH A 40 440 220 HOH HOH . F 3 HOH A 41 441 228 HOH HOH . F 3 HOH A 42 442 233 HOH HOH . F 3 HOH A 43 443 239 HOH HOH . F 3 HOH A 44 444 241 HOH HOH . F 3 HOH A 45 445 244 HOH HOH . F 3 HOH A 46 446 257 HOH HOH . F 3 HOH A 47 447 262 HOH HOH . F 3 HOH A 48 448 267 HOH HOH . F 3 HOH A 49 449 270 HOH HOH . F 3 HOH A 50 450 274 HOH HOH . F 3 HOH A 51 451 275 HOH HOH . F 3 HOH A 52 452 276 HOH HOH . F 3 HOH A 53 453 280 HOH HOH . F 3 HOH A 54 454 283 HOH HOH . F 3 HOH A 55 455 286 HOH HOH . F 3 HOH A 56 456 288 HOH HOH . F 3 HOH A 57 457 290 HOH HOH . F 3 HOH A 58 458 299 HOH HOH . F 3 HOH A 59 459 304 HOH HOH . F 3 HOH A 60 460 314 HOH HOH . F 3 HOH A 61 461 318 HOH HOH . F 3 HOH A 62 462 330 HOH HOH . F 3 HOH A 63 463 338 HOH HOH . F 3 HOH A 64 464 354 HOH HOH . F 3 HOH A 65 465 356 HOH HOH . F 3 HOH A 66 466 358 HOH HOH . F 3 HOH A 67 467 362 HOH HOH . F 3 HOH A 68 468 378 HOH HOH . F 3 HOH A 69 469 382 HOH HOH . F 3 HOH A 70 470 387 HOH HOH . F 3 HOH A 71 471 397 HOH HOH . F 3 HOH A 72 472 400 HOH HOH . F 3 HOH A 73 473 401 HOH HOH . F 3 HOH A 74 474 412 HOH HOH . F 3 HOH A 75 475 427 HOH HOH . F 3 HOH A 76 476 436 HOH HOH . F 3 HOH A 77 477 438 HOH HOH . F 3 HOH A 78 478 465 HOH HOH . F 3 HOH A 79 479 467 HOH HOH . F 3 HOH A 80 480 469 HOH HOH . F 3 HOH A 81 481 471 HOH HOH . F 3 HOH A 82 482 475 HOH HOH . F 3 HOH A 83 483 476 HOH HOH . F 3 HOH A 84 484 477 HOH HOH . F 3 HOH A 85 485 484 HOH HOH . F 3 HOH A 86 486 485 HOH HOH . F 3 HOH A 87 487 486 HOH HOH . F 3 HOH A 88 488 488 HOH HOH . F 3 HOH A 89 489 489 HOH HOH . F 3 HOH A 90 490 490 HOH HOH . F 3 HOH A 91 491 491 HOH HOH . G 3 HOH B 1 401 1 HOH HOH . G 3 HOH B 2 402 2 HOH HOH . G 3 HOH B 3 403 6 HOH HOH . G 3 HOH B 4 404 8 HOH HOH . G 3 HOH B 5 405 10 HOH HOH . G 3 HOH B 6 406 18 HOH HOH . G 3 HOH B 7 407 20 HOH HOH . G 3 HOH B 8 408 24 HOH HOH . G 3 HOH B 9 409 27 HOH HOH . G 3 HOH B 10 410 28 HOH HOH . G 3 HOH B 11 411 29 HOH HOH . G 3 HOH B 12 412 32 HOH HOH . G 3 HOH B 13 413 38 HOH HOH . G 3 HOH B 14 414 39 HOH HOH . G 3 HOH B 15 415 43 HOH HOH . G 3 HOH B 16 416 47 HOH HOH . G 3 HOH B 17 417 53 HOH HOH . G 3 HOH B 18 418 55 HOH HOH . G 3 HOH B 19 419 67 HOH HOH . G 3 HOH B 20 420 68 HOH HOH . G 3 HOH B 21 421 70 HOH HOH . G 3 HOH B 22 422 72 HOH HOH . G 3 HOH B 23 423 73 HOH HOH . G 3 HOH B 24 424 74 HOH HOH . G 3 HOH B 25 425 75 HOH HOH . G 3 HOH B 26 426 76 HOH HOH . G 3 HOH B 27 427 77 HOH HOH . G 3 HOH B 28 428 78 HOH HOH . G 3 HOH B 29 429 85 HOH HOH . G 3 HOH B 30 430 86 HOH HOH . G 3 HOH B 31 431 93 HOH HOH . G 3 HOH B 32 432 95 HOH HOH . G 3 HOH B 33 433 98 HOH HOH . G 3 HOH B 34 434 103 HOH HOH . G 3 HOH B 35 435 104 HOH HOH . G 3 HOH B 36 436 113 HOH HOH . G 3 HOH B 37 437 119 HOH HOH . G 3 HOH B 38 438 121 HOH HOH . G 3 HOH B 39 439 128 HOH HOH . G 3 HOH B 40 440 130 HOH HOH . G 3 HOH B 41 441 133 HOH HOH . G 3 HOH B 42 442 139 HOH HOH . G 3 HOH B 43 443 144 HOH HOH . G 3 HOH B 44 444 146 HOH HOH . G 3 HOH B 45 445 150 HOH HOH . G 3 HOH B 46 446 159 HOH HOH . G 3 HOH B 47 447 162 HOH HOH . G 3 HOH B 48 448 163 HOH HOH . G 3 HOH B 49 449 164 HOH HOH . G 3 HOH B 50 450 165 HOH HOH . G 3 HOH B 51 451 168 HOH HOH . G 3 HOH B 52 452 176 HOH HOH . G 3 HOH B 53 453 178 HOH HOH . G 3 HOH B 54 454 179 HOH HOH . G 3 HOH B 55 455 180 HOH HOH . G 3 HOH B 56 456 184 HOH HOH . G 3 HOH B 57 457 193 HOH HOH . G 3 HOH B 58 458 194 HOH HOH . G 3 HOH B 59 459 195 HOH HOH . G 3 HOH B 60 460 199 HOH HOH . G 3 HOH B 61 461 201 HOH HOH . G 3 HOH B 62 462 208 HOH HOH . G 3 HOH B 63 463 209 HOH HOH . G 3 HOH B 64 464 210 HOH HOH . G 3 HOH B 65 465 214 HOH HOH . G 3 HOH B 66 466 216 HOH HOH . G 3 HOH B 67 467 226 HOH HOH . G 3 HOH B 68 468 227 HOH HOH . G 3 HOH B 69 469 229 HOH HOH . G 3 HOH B 70 470 232 HOH HOH . G 3 HOH B 71 471 236 HOH HOH . G 3 HOH B 72 472 237 HOH HOH . G 3 HOH B 73 473 243 HOH HOH . G 3 HOH B 74 474 245 HOH HOH . G 3 HOH B 75 475 246 HOH HOH . G 3 HOH B 76 476 249 HOH HOH . G 3 HOH B 77 477 250 HOH HOH . G 3 HOH B 78 478 253 HOH HOH . G 3 HOH B 79 479 254 HOH HOH . G 3 HOH B 80 480 259 HOH HOH . G 3 HOH B 81 481 263 HOH HOH . G 3 HOH B 82 482 265 HOH HOH . G 3 HOH B 83 483 273 HOH HOH . G 3 HOH B 84 484 287 HOH HOH . G 3 HOH B 85 485 291 HOH HOH . G 3 HOH B 86 486 292 HOH HOH . G 3 HOH B 87 487 293 HOH HOH . G 3 HOH B 88 488 295 HOH HOH . G 3 HOH B 89 489 297 HOH HOH . G 3 HOH B 90 490 302 HOH HOH . G 3 HOH B 91 491 311 HOH HOH . G 3 HOH B 92 492 326 HOH HOH . G 3 HOH B 93 493 331 HOH HOH . G 3 HOH B 94 494 333 HOH HOH . G 3 HOH B 95 495 335 HOH HOH . G 3 HOH B 96 496 343 HOH HOH . G 3 HOH B 97 497 345 HOH HOH . G 3 HOH B 98 498 346 HOH HOH . G 3 HOH B 99 499 347 HOH HOH . G 3 HOH B 100 500 350 HOH HOH . G 3 HOH B 101 501 351 HOH HOH . G 3 HOH B 102 502 352 HOH HOH . G 3 HOH B 103 503 357 HOH HOH . G 3 HOH B 104 504 359 HOH HOH . G 3 HOH B 105 505 360 HOH HOH . G 3 HOH B 106 506 363 HOH HOH . G 3 HOH B 107 507 364 HOH HOH . G 3 HOH B 108 508 370 HOH HOH . G 3 HOH B 109 509 371 HOH HOH . G 3 HOH B 110 510 374 HOH HOH . G 3 HOH B 111 511 376 HOH HOH . G 3 HOH B 112 512 379 HOH HOH . G 3 HOH B 113 513 381 HOH HOH . G 3 HOH B 114 514 383 HOH HOH . G 3 HOH B 115 515 386 HOH HOH . G 3 HOH B 116 516 392 HOH HOH . G 3 HOH B 117 517 393 HOH HOH . G 3 HOH B 118 518 394 HOH HOH . G 3 HOH B 119 519 399 HOH HOH . G 3 HOH B 120 520 403 HOH HOH . G 3 HOH B 121 521 415 HOH HOH . G 3 HOH B 122 522 416 HOH HOH . G 3 HOH B 123 523 422 HOH HOH . G 3 HOH B 124 524 423 HOH HOH . G 3 HOH B 125 525 425 HOH HOH . G 3 HOH B 126 526 426 HOH HOH . G 3 HOH B 127 527 430 HOH HOH . G 3 HOH B 128 528 437 HOH HOH . G 3 HOH B 129 529 444 HOH HOH . G 3 HOH B 130 530 445 HOH HOH . G 3 HOH B 131 531 450 HOH HOH . G 3 HOH B 132 532 453 HOH HOH . G 3 HOH B 133 533 459 HOH HOH . G 3 HOH B 134 534 461 HOH HOH . G 3 HOH B 135 535 478 HOH HOH . G 3 HOH B 136 536 480 HOH HOH . G 3 HOH B 137 537 482 HOH HOH . G 3 HOH B 138 538 483 HOH HOH . H 3 HOH C 1 401 15 HOH HOH . H 3 HOH C 2 402 21 HOH HOH . H 3 HOH C 3 403 42 HOH HOH . H 3 HOH C 4 404 50 HOH HOH . H 3 HOH C 5 405 58 HOH HOH . H 3 HOH C 6 406 62 HOH HOH . H 3 HOH C 7 407 69 HOH HOH . H 3 HOH C 8 408 83 HOH HOH . H 3 HOH C 9 409 101 HOH HOH . H 3 HOH C 10 410 108 HOH HOH . H 3 HOH C 11 411 129 HOH HOH . H 3 HOH C 12 412 135 HOH HOH . H 3 HOH C 13 413 136 HOH HOH . H 3 HOH C 14 414 138 HOH HOH . H 3 HOH C 15 415 140 HOH HOH . H 3 HOH C 16 416 149 HOH HOH . H 3 HOH C 17 417 152 HOH HOH . H 3 HOH C 18 418 154 HOH HOH . H 3 HOH C 19 419 169 HOH HOH . H 3 HOH C 20 420 174 HOH HOH . H 3 HOH C 21 421 175 HOH HOH . H 3 HOH C 22 422 181 HOH HOH . H 3 HOH C 23 423 182 HOH HOH . H 3 HOH C 24 424 183 HOH HOH . H 3 HOH C 25 425 189 HOH HOH . H 3 HOH C 26 426 202 HOH HOH . H 3 HOH C 27 427 206 HOH HOH . H 3 HOH C 28 428 207 HOH HOH . H 3 HOH C 29 429 218 HOH HOH . H 3 HOH C 30 430 223 HOH HOH . H 3 HOH C 31 431 224 HOH HOH . H 3 HOH C 32 432 234 HOH HOH . H 3 HOH C 33 433 240 HOH HOH . H 3 HOH C 34 434 248 HOH HOH . H 3 HOH C 35 435 251 HOH HOH . H 3 HOH C 36 436 256 HOH HOH . H 3 HOH C 37 437 260 HOH HOH . H 3 HOH C 38 438 261 HOH HOH . H 3 HOH C 39 439 268 HOH HOH . H 3 HOH C 40 440 269 HOH HOH . H 3 HOH C 41 441 279 HOH HOH . H 3 HOH C 42 442 281 HOH HOH . H 3 HOH C 43 443 282 HOH HOH . H 3 HOH C 44 444 294 HOH HOH . H 3 HOH C 45 445 301 HOH HOH . H 3 HOH C 46 446 305 HOH HOH . H 3 HOH C 47 447 310 HOH HOH . H 3 HOH C 48 448 315 HOH HOH . H 3 HOH C 49 449 319 HOH HOH . H 3 HOH C 50 450 320 HOH HOH . H 3 HOH C 51 451 324 HOH HOH . H 3 HOH C 52 452 325 HOH HOH . H 3 HOH C 53 453 334 HOH HOH . H 3 HOH C 54 454 344 HOH HOH . H 3 HOH C 55 455 355 HOH HOH . H 3 HOH C 56 456 361 HOH HOH . H 3 HOH C 57 457 369 HOH HOH . H 3 HOH C 58 458 373 HOH HOH . H 3 HOH C 59 459 384 HOH HOH . H 3 HOH C 60 460 390 HOH HOH . H 3 HOH C 61 461 391 HOH HOH . H 3 HOH C 62 462 405 HOH HOH . H 3 HOH C 63 463 432 HOH HOH . H 3 HOH C 64 464 435 HOH HOH . H 3 HOH C 65 465 439 HOH HOH . H 3 HOH C 66 466 442 HOH HOH . H 3 HOH C 67 467 449 HOH HOH . H 3 HOH C 68 468 452 HOH HOH . H 3 HOH C 69 469 455 HOH HOH . H 3 HOH C 70 470 458 HOH HOH . H 3 HOH C 71 471 462 HOH HOH . H 3 HOH C 72 472 464 HOH HOH . H 3 HOH C 73 473 466 HOH HOH . H 3 HOH C 74 474 472 HOH HOH . H 3 HOH C 75 475 473 HOH HOH . H 3 HOH C 76 476 474 HOH HOH . H 3 HOH C 77 477 479 HOH HOH . H 3 HOH C 78 478 481 HOH HOH . H 3 HOH C 79 479 487 HOH HOH . I 3 HOH D 1 601 4 HOH HOH . I 3 HOH D 2 602 9 HOH HOH . I 3 HOH D 3 603 12 HOH HOH . I 3 HOH D 4 604 16 HOH HOH . I 3 HOH D 5 605 17 HOH HOH . I 3 HOH D 6 606 19 HOH HOH . I 3 HOH D 7 607 37 HOH HOH . I 3 HOH D 8 608 40 HOH HOH . I 3 HOH D 9 609 41 HOH HOH . I 3 HOH D 10 610 49 HOH HOH . I 3 HOH D 11 611 51 HOH HOH . I 3 HOH D 12 612 56 HOH HOH . I 3 HOH D 13 613 59 HOH HOH . I 3 HOH D 14 614 61 HOH HOH . I 3 HOH D 15 615 63 HOH HOH . I 3 HOH D 16 616 64 HOH HOH . I 3 HOH D 17 617 79 HOH HOH . I 3 HOH D 18 618 80 HOH HOH . I 3 HOH D 19 619 81 HOH HOH . I 3 HOH D 20 620 87 HOH HOH . I 3 HOH D 21 621 91 HOH HOH . I 3 HOH D 22 622 94 HOH HOH . I 3 HOH D 23 623 100 HOH HOH . I 3 HOH D 24 624 105 HOH HOH . I 3 HOH D 25 625 106 HOH HOH . I 3 HOH D 26 626 109 HOH HOH . I 3 HOH D 27 627 112 HOH HOH . I 3 HOH D 28 628 114 HOH HOH . I 3 HOH D 29 629 115 HOH HOH . I 3 HOH D 30 630 118 HOH HOH . I 3 HOH D 31 631 120 HOH HOH . I 3 HOH D 32 632 122 HOH HOH . I 3 HOH D 33 633 125 HOH HOH . I 3 HOH D 34 634 127 HOH HOH . I 3 HOH D 35 635 131 HOH HOH . I 3 HOH D 36 636 132 HOH HOH . I 3 HOH D 37 637 141 HOH HOH . I 3 HOH D 38 638 142 HOH HOH . I 3 HOH D 39 639 145 HOH HOH . I 3 HOH D 40 640 153 HOH HOH . I 3 HOH D 41 641 155 HOH HOH . I 3 HOH D 42 642 156 HOH HOH . I 3 HOH D 43 643 166 HOH HOH . I 3 HOH D 44 644 167 HOH HOH . I 3 HOH D 45 645 188 HOH HOH . I 3 HOH D 46 646 191 HOH HOH . I 3 HOH D 47 647 192 HOH HOH . I 3 HOH D 48 648 203 HOH HOH . I 3 HOH D 49 649 212 HOH HOH . I 3 HOH D 50 650 213 HOH HOH . I 3 HOH D 51 651 222 HOH HOH . I 3 HOH D 52 652 235 HOH HOH . I 3 HOH D 53 653 247 HOH HOH . I 3 HOH D 54 654 252 HOH HOH . I 3 HOH D 55 655 255 HOH HOH . I 3 HOH D 56 656 258 HOH HOH . I 3 HOH D 57 657 271 HOH HOH . I 3 HOH D 58 658 284 HOH HOH . I 3 HOH D 59 659 289 HOH HOH . I 3 HOH D 60 660 296 HOH HOH . I 3 HOH D 61 661 303 HOH HOH . I 3 HOH D 62 662 306 HOH HOH . I 3 HOH D 63 663 307 HOH HOH . I 3 HOH D 64 664 308 HOH HOH . I 3 HOH D 65 665 313 HOH HOH . I 3 HOH D 66 666 316 HOH HOH . I 3 HOH D 67 667 317 HOH HOH . I 3 HOH D 68 668 321 HOH HOH . I 3 HOH D 69 669 322 HOH HOH . I 3 HOH D 70 670 323 HOH HOH . I 3 HOH D 71 671 328 HOH HOH . I 3 HOH D 72 672 329 HOH HOH . I 3 HOH D 73 673 337 HOH HOH . I 3 HOH D 74 674 339 HOH HOH . I 3 HOH D 75 675 342 HOH HOH . I 3 HOH D 76 676 349 HOH HOH . I 3 HOH D 77 677 353 HOH HOH . I 3 HOH D 78 678 366 HOH HOH . I 3 HOH D 79 679 389 HOH HOH . I 3 HOH D 80 680 396 HOH HOH . I 3 HOH D 81 681 398 HOH HOH . I 3 HOH D 82 682 402 HOH HOH . I 3 HOH D 83 683 406 HOH HOH . I 3 HOH D 84 684 409 HOH HOH . I 3 HOH D 85 685 414 HOH HOH . I 3 HOH D 86 686 418 HOH HOH . I 3 HOH D 87 687 419 HOH HOH . I 3 HOH D 88 688 428 HOH HOH . I 3 HOH D 89 689 431 HOH HOH . I 3 HOH D 90 690 433 HOH HOH . I 3 HOH D 91 691 434 HOH HOH . I 3 HOH D 92 692 448 HOH HOH . I 3 HOH D 93 693 454 HOH HOH . I 3 HOH D 94 694 456 HOH HOH . I 3 HOH D 95 695 463 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . E 2 -37.199 0.95 43.924 1 33.72 ? PB GDP 501 D 1 HETATM 2 O O1B GDP . . . E 2 -38.453 1.581 44.461 1 33.39 ? O1B GDP 501 D 1 HETATM 3 O O2B GDP . . . E 2 -37.439 -0.242 43.069 1 32.96 ? O2B GDP 501 D 1 HETATM 4 O O3B GDP . . . E 2 -36.213 1.921 43.274 1 31.77 ? O3B GDP 501 D 1 HETATM 5 O O3A GDP . . . E 2 -36.319 0.494 45.205 1 34.38 ? O3A GDP 501 D 1 HETATM 6 P PA GDP . . . E 2 -36.826 -0.027 46.628 1 34.04 ? PA GDP 501 D 1 HETATM 7 O O1A GDP . . . E 2 -37.918 -1.051 46.452 1 32.89 ? O1A GDP 501 D 1 HETATM 8 O O2A GDP . . . E 2 -37.092 1.161 47.529 1 33.99 ? O2A GDP 501 D 1 HETATM 9 O O5' GDP . . . E 2 -35.519 -0.76 47.234 1 35.91 ? O5' GDP 501 D 1 HETATM 10 C C5' GDP . . . E 2 -34.9 -1.873 46.589 1 36.65 ? C5' GDP 501 D 1 HETATM 11 C C4' GDP . . . E 2 -33.939 -2.586 47.534 1 38.63 ? C4' GDP 501 D 1 HETATM 12 O O4' GDP . . . E 2 -32.821 -1.715 47.835 1 37.32 ? O4' GDP 501 D 1 HETATM 13 C C3' GDP . . . E 2 -34.627 -2.996 48.829 1 38.33 ? C3' GDP 501 D 1 HETATM 14 O O3' GDP . . . E 2 -34.263 -4.335 49.268 1 43.66 ? O3' GDP 501 D 1 HETATM 15 C C2' GDP . . . E 2 -34.197 -1.862 49.738 1 37.85 ? C2' GDP 501 D 1 HETATM 16 O O2' GDP . . . E 2 -34.211 -2.169 51.123 1 39.17 ? O2' GDP 501 D 1 HETATM 17 C C1' GDP . . . E 2 -32.797 -1.516 49.245 1 36.84 ? C1' GDP 501 D 1 HETATM 18 N N9 GDP . . . E 2 -32.448 -0.13 49.545 1 34.2 ? N9 GDP 501 D 1 HETATM 19 C C8 GDP . . . E 2 -33.196 0.975 49.325 1 32.32 ? C8 GDP 501 D 1 HETATM 20 N N7 GDP . . . E 2 -32.523 2.077 49.73 1 33.1 ? N7 GDP 501 D 1 HETATM 21 C C5 GDP . . . E 2 -31.33 1.701 50.218 1 32.54 ? C5 GDP 501 D 1 HETATM 22 C C6 GDP . . . E 2 -30.145 2.37 50.796 1 32.31 ? C6 GDP 501 D 1 HETATM 23 O O6 GDP . . . E 2 -30.067 3.615 50.97 1 30.28 ? O6 GDP 501 D 1 HETATM 24 N N1 GDP . . . E 2 -29.139 1.57 51.157 1 34.89 ? N1 GDP 501 D 1 HETATM 25 C C2 GDP . . . E 2 -29.177 0.217 51.003 1 34.71 ? C2 GDP 501 D 1 HETATM 26 N N2 GDP . . . E 2 -28.124 -0.529 51.382 1 36.96 ? N2 GDP 501 D 1 HETATM 27 N N3 GDP . . . E 2 -30.197 -0.454 50.461 1 32.59 ? N3 GDP 501 D 1 HETATM 28 C C4 GDP . . . E 2 -31.29 0.23 50.078 1 34.88 ? C4 GDP 501 D 1 HETATM 29 H H5' GDP . . . E 2 -34.42 -1.57 45.802 1 36.65 ? H5' GDP 501 D 1 HETATM 30 H "H5''" GDP . . . E 2 -35.58 -2.494 46.285 1 36.65 ? "H5''" GDP 501 D 1 HETATM 31 H H4' GDP . . . E 2 -33.626 -3.391 47.092 1 38.63 ? H4' GDP 501 D 1 HETATM 32 H H3' GDP . . . E 2 -35.591 -3.091 48.779 1 38.33 ? H3' GDP 501 D 1 HETATM 33 H HO3' GDP . . . E 2 -34.167 -4.34 50.103 1 43.66 ? HO3' GDP 501 D 1 HETATM 34 H H2' GDP . . . E 2 -34.823 -1.123 49.685 1 37.85 ? H2' GDP 501 D 1 HETATM 35 H HO2' GDP . . . E 2 -33.961 -1.498 51.562 1 39.17 ? HO2' GDP 501 D 1 HETATM 36 H H1' GDP . . . E 2 -32.134 -2.071 49.684 1 36.84 ? H1' GDP 501 D 1 HETATM 37 H H8 GDP . . . E 2 -34.084 0.977 48.935 1 32.32 ? H8 GDP 501 D 1 HETATM 38 H HN1 GDP . . . E 2 -28.436 1.925 51.502 1 34.89 ? HN1 GDP 501 D 1 HETATM 39 H HN21 GDP . . . E 2 -27.429 -0.152 51.72 1 36.96 ? HN21 GDP 501 D 1 HETATM 40 H HN22 GDP . . . E 2 -28.145 -1.383 51.286 1 36.96 ? HN22 GDP 501 D 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 40 #