data_4JZL # _model_server_result.job_id HcYdR9Bro1Ao3JFbgO2GSg _model_server_result.datetime_utc '2024-12-26 17:59:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jzl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 4JZL # _exptl.entry_id 4JZL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.87 _cell.angle_gamma 90 _cell.entry_id 4JZL _cell.length_a 56.69 _cell.length_b 42.9 _cell.length_c 62.67 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JZL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,I 1 1 B,C,G,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 4JZL _atom_sites.fract_transf_matrix[1][1] 0.01764 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008553 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02331 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017733 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GOL A 1 301 1 GOL GOL . F 3 HOH A 1 401 11 HOH HOH . F 3 HOH A 2 402 15 HOH HOH . F 3 HOH A 3 403 25 HOH HOH . F 3 HOH A 4 404 28 HOH HOH . F 3 HOH A 5 405 39 HOH HOH . F 3 HOH A 6 406 48 HOH HOH . F 3 HOH A 7 407 49 HOH HOH . F 3 HOH A 8 408 59 HOH HOH . F 3 HOH A 9 409 65 HOH HOH . F 3 HOH A 10 410 71 HOH HOH . F 3 HOH A 11 411 74 HOH HOH . F 3 HOH A 12 412 75 HOH HOH . F 3 HOH A 13 413 79 HOH HOH . F 3 HOH A 14 414 82 HOH HOH . F 3 HOH A 15 415 84 HOH HOH . F 3 HOH A 16 416 85 HOH HOH . F 3 HOH A 17 417 93 HOH HOH . F 3 HOH A 18 418 97 HOH HOH . F 3 HOH A 19 419 99 HOH HOH . F 3 HOH A 20 420 100 HOH HOH . F 3 HOH A 21 421 101 HOH HOH . F 3 HOH A 22 422 108 HOH HOH . G 3 HOH B 1 301 2 HOH HOH . G 3 HOH B 2 302 3 HOH HOH . G 3 HOH B 3 303 9 HOH HOH . G 3 HOH B 4 304 10 HOH HOH . G 3 HOH B 5 305 13 HOH HOH . G 3 HOH B 6 306 16 HOH HOH . G 3 HOH B 7 307 18 HOH HOH . G 3 HOH B 8 308 21 HOH HOH . G 3 HOH B 9 309 22 HOH HOH . G 3 HOH B 10 310 24 HOH HOH . G 3 HOH B 11 311 26 HOH HOH . G 3 HOH B 12 312 27 HOH HOH . G 3 HOH B 13 313 34 HOH HOH . G 3 HOH B 14 314 35 HOH HOH . G 3 HOH B 15 315 36 HOH HOH . G 3 HOH B 16 316 40 HOH HOH . G 3 HOH B 17 317 42 HOH HOH . G 3 HOH B 18 318 44 HOH HOH . G 3 HOH B 19 319 47 HOH HOH . G 3 HOH B 20 320 52 HOH HOH . G 3 HOH B 21 321 54 HOH HOH . G 3 HOH B 22 322 55 HOH HOH . G 3 HOH B 23 323 56 HOH HOH . G 3 HOH B 24 324 57 HOH HOH . G 3 HOH B 25 325 60 HOH HOH . G 3 HOH B 26 326 61 HOH HOH . G 3 HOH B 27 327 62 HOH HOH . G 3 HOH B 28 328 70 HOH HOH . G 3 HOH B 29 329 73 HOH HOH . G 3 HOH B 30 330 76 HOH HOH . G 3 HOH B 31 331 80 HOH HOH . G 3 HOH B 32 332 83 HOH HOH . G 3 HOH B 33 333 86 HOH HOH . G 3 HOH B 34 334 87 HOH HOH . G 3 HOH B 35 335 90 HOH HOH . G 3 HOH B 36 336 91 HOH HOH . G 3 HOH B 37 337 94 HOH HOH . G 3 HOH B 38 338 102 HOH HOH . G 3 HOH B 39 339 104 HOH HOH . H 3 HOH C 1 301 5 HOH HOH . H 3 HOH C 2 302 6 HOH HOH . H 3 HOH C 3 303 12 HOH HOH . H 3 HOH C 4 304 14 HOH HOH . H 3 HOH C 5 305 19 HOH HOH . H 3 HOH C 6 306 20 HOH HOH . H 3 HOH C 7 307 23 HOH HOH . H 3 HOH C 8 308 30 HOH HOH . H 3 HOH C 9 309 32 HOH HOH . H 3 HOH C 10 310 33 HOH HOH . H 3 HOH C 11 311 45 HOH HOH . H 3 HOH C 12 312 46 HOH HOH . H 3 HOH C 13 313 50 HOH HOH . H 3 HOH C 14 314 63 HOH HOH . H 3 HOH C 15 315 67 HOH HOH . H 3 HOH C 16 316 68 HOH HOH . H 3 HOH C 17 317 69 HOH HOH . H 3 HOH C 18 318 72 HOH HOH . H 3 HOH C 19 319 88 HOH HOH . H 3 HOH C 20 320 89 HOH HOH . H 3 HOH C 21 321 92 HOH HOH . H 3 HOH C 22 322 105 HOH HOH . H 3 HOH C 23 323 106 HOH HOH . H 3 HOH C 24 324 107 HOH HOH . H 3 HOH C 25 325 111 HOH HOH . H 3 HOH C 26 326 113 HOH HOH . I 3 HOH D 1 301 1 HOH HOH . I 3 HOH D 2 302 4 HOH HOH . I 3 HOH D 3 303 7 HOH HOH . I 3 HOH D 4 304 8 HOH HOH . I 3 HOH D 5 305 17 HOH HOH . I 3 HOH D 6 306 29 HOH HOH . I 3 HOH D 7 307 31 HOH HOH . I 3 HOH D 8 308 37 HOH HOH . I 3 HOH D 9 309 38 HOH HOH . I 3 HOH D 10 310 41 HOH HOH . I 3 HOH D 11 311 43 HOH HOH . I 3 HOH D 12 312 51 HOH HOH . I 3 HOH D 13 313 53 HOH HOH . I 3 HOH D 14 314 58 HOH HOH . I 3 HOH D 15 315 64 HOH HOH . I 3 HOH D 16 316 66 HOH HOH . I 3 HOH D 17 317 77 HOH HOH . I 3 HOH D 18 318 78 HOH HOH . I 3 HOH D 19 319 81 HOH HOH . I 3 HOH D 20 320 95 HOH HOH . I 3 HOH D 21 321 96 HOH HOH . I 3 HOH D 22 322 98 HOH HOH . I 3 HOH D 23 323 103 HOH HOH . I 3 HOH D 24 324 109 HOH HOH . I 3 HOH D 25 325 110 HOH HOH . I 3 HOH D 26 326 112 HOH HOH . I 3 HOH D 27 327 114 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 2 62.411 22.467 -23.423 1 67.54 ? C1 GOL 301 A 1 HETATM 2 O O1 GOL . . . E 2 63.463 21.569 -23.545 1 72.77 ? O1 GOL 301 A 1 HETATM 3 C C2 GOL . . . E 2 62.345 23.614 -24.409 1 68.53 ? C2 GOL 301 A 1 HETATM 4 O O2 GOL . . . E 2 63.523 24.33 -24.516 1 60.99 ? O2 GOL 301 A 1 HETATM 5 C C3 GOL . . . E 2 61.113 24.477 -24.24 1 69.54 ? C3 GOL 301 A 1 HETATM 6 O O3 GOL . . . E 2 60.91 25.514 -25.153 1 70.02 ? O3 GOL 301 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #