data_4JZP # _model_server_result.job_id itYe-C-WdGCPefbhc9263w _model_server_result.datetime_utc '2025-07-31 05:19:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4jzp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 4JZP # _exptl.entry_id 4JZP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4JZP _cell.length_a 70.61 _cell.length_b 70.61 _cell.length_c 80.12 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4JZP _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 46 A ALA 211 1_555 A N MSE 47 A MSE 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C MSE 47 A MSE 212 1_555 A N ARG 48 A ARG 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 B C ALA 46 B ALA 211 1_555 B N MSE 47 B MSE 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 B C MSE 47 B MSE 212 1_555 B N ARG 48 B ARG 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 203 n n O1 HO1 PG4 sing 204 n n C1 C2 PG4 sing 205 n n C1 H11 PG4 sing 206 n n C1 H12 PG4 sing 207 n n C2 O2 PG4 sing 208 n n C2 H21 PG4 sing 209 n n C2 H22 PG4 sing 210 n n O2 C3 PG4 sing 211 n n C3 C4 PG4 sing 212 n n C3 H31 PG4 sing 213 n n C3 H32 PG4 sing 214 n n C4 O3 PG4 sing 215 n n C4 H41 PG4 sing 216 n n C4 H42 PG4 sing 217 n n O3 C5 PG4 sing 218 n n C5 C6 PG4 sing 219 n n C5 H51 PG4 sing 220 n n C5 H52 PG4 sing 221 n n C6 O4 PG4 sing 222 n n C6 H61 PG4 sing 223 n n C6 H62 PG4 sing 224 n n O4 C7 PG4 sing 225 n n C7 C8 PG4 sing 226 n n C7 H71 PG4 sing 227 n n C7 H72 PG4 sing 228 n n C8 O5 PG4 sing 229 n n C8 H81 PG4 sing 230 n n C8 H82 PG4 sing 231 n n O5 HO5 PG4 sing 232 n n # _atom_sites.entry_id 4JZP _atom_sites.fract_transf_matrix[1][1] 0.014162 _atom_sites.fract_transf_matrix[1][2] 0.008177 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016353 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012481 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PG4 A 1 301 2 PG4 PG4 . D 3 SO4 A 1 302 3 SO4 SO4 . E 2 PG4 B 1 301 1 PG4 PG4 . F 4 HOH A 1 401 4 HOH HOH . F 4 HOH A 2 402 6 HOH HOH . F 4 HOH A 3 403 9 HOH HOH . F 4 HOH A 4 404 13 HOH HOH . F 4 HOH A 5 405 18 HOH HOH . F 4 HOH A 6 406 19 HOH HOH . F 4 HOH A 7 407 20 HOH HOH . F 4 HOH A 8 408 21 HOH HOH . F 4 HOH A 9 409 23 HOH HOH . F 4 HOH A 10 410 24 HOH HOH . F 4 HOH A 11 411 25 HOH HOH . F 4 HOH A 12 412 34 HOH HOH . F 4 HOH A 13 413 35 HOH HOH . F 4 HOH A 14 414 43 HOH HOH . F 4 HOH A 15 415 44 HOH HOH . F 4 HOH A 16 416 47 HOH HOH . F 4 HOH A 17 417 52 HOH HOH . F 4 HOH A 18 418 53 HOH HOH . F 4 HOH A 19 419 54 HOH HOH . F 4 HOH A 20 420 55 HOH HOH . F 4 HOH A 21 421 57 HOH HOH . F 4 HOH A 22 422 58 HOH HOH . F 4 HOH A 23 423 59 HOH HOH . F 4 HOH A 24 424 60 HOH HOH . F 4 HOH A 25 425 64 HOH HOH . F 4 HOH A 26 426 65 HOH HOH . F 4 HOH A 27 427 66 HOH HOH . F 4 HOH A 28 428 68 HOH HOH . F 4 HOH A 29 429 69 HOH HOH . F 4 HOH A 30 430 71 HOH HOH . F 4 HOH A 31 431 72 HOH HOH . F 4 HOH A 32 432 75 HOH HOH . F 4 HOH A 33 433 77 HOH HOH . G 4 HOH B 1 401 5 HOH HOH . G 4 HOH B 2 402 7 HOH HOH . G 4 HOH B 3 403 8 HOH HOH . G 4 HOH B 4 404 10 HOH HOH . G 4 HOH B 5 405 11 HOH HOH . G 4 HOH B 6 406 12 HOH HOH . G 4 HOH B 7 407 14 HOH HOH . G 4 HOH B 8 408 15 HOH HOH . G 4 HOH B 9 409 16 HOH HOH . G 4 HOH B 10 410 17 HOH HOH . G 4 HOH B 11 411 22 HOH HOH . G 4 HOH B 12 412 26 HOH HOH . G 4 HOH B 13 413 27 HOH HOH . G 4 HOH B 14 414 28 HOH HOH . G 4 HOH B 15 415 29 HOH HOH . G 4 HOH B 16 416 30 HOH HOH . G 4 HOH B 17 417 31 HOH HOH . G 4 HOH B 18 418 32 HOH HOH . G 4 HOH B 19 419 33 HOH HOH . G 4 HOH B 20 420 36 HOH HOH . G 4 HOH B 21 421 37 HOH HOH . G 4 HOH B 22 422 38 HOH HOH . G 4 HOH B 23 423 39 HOH HOH . G 4 HOH B 24 424 40 HOH HOH . G 4 HOH B 25 425 41 HOH HOH . G 4 HOH B 26 426 42 HOH HOH . G 4 HOH B 27 427 45 HOH HOH . G 4 HOH B 28 428 46 HOH HOH . G 4 HOH B 29 429 48 HOH HOH . G 4 HOH B 30 430 49 HOH HOH . G 4 HOH B 31 431 50 HOH HOH . G 4 HOH B 32 432 51 HOH HOH . G 4 HOH B 33 433 56 HOH HOH . G 4 HOH B 34 434 61 HOH HOH . G 4 HOH B 35 435 62 HOH HOH . G 4 HOH B 36 436 63 HOH HOH . G 4 HOH B 37 437 67 HOH HOH . G 4 HOH B 38 438 70 HOH HOH . G 4 HOH B 39 439 73 HOH HOH . G 4 HOH B 40 440 74 HOH HOH . G 4 HOH B 41 441 76 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . C 2 24.16 12.157 15.339 1 86.69 ? O1 PG4 301 A 1 HETATM 2 C C1 PG4 . . . C 2 24.935 13.248 14.999 1 80.35 ? C1 PG4 301 A 1 HETATM 3 C C2 PG4 . . . C 2 24.061 14.444 14.828 1 75.65 ? C2 PG4 301 A 1 HETATM 4 O O2 PG4 . . . C 2 24.272 15.32 15.873 1 73.89 ? O2 PG4 301 A 1 HETATM 5 C C3 PG4 . . . C 2 24.493 16.657 15.623 1 69.77 ? C3 PG4 301 A 1 HETATM 6 C C4 PG4 . . . C 2 24.31 17.429 16.884 1 70.33 ? C4 PG4 301 A 1 HETATM 7 O O3 PG4 . . . C 2 23.356 18.402 16.68 1 72.7 ? O3 PG4 301 A 1 HETATM 8 C C5 PG4 . . . C 2 22.378 18.606 17.631 1 74.91 ? C5 PG4 301 A 1 HETATM 9 C C6 PG4 . . . C 2 21.314 19.503 17.088 1 74.94 ? C6 PG4 301 A 1 HETATM 10 O O4 PG4 . . . C 2 21.303 20.697 17.778 1 78.28 ? O4 PG4 301 A 1 HETATM 11 C C7 PG4 . . . C 2 20.419 20.902 18.82 1 80.31 ? C7 PG4 301 A 1 HETATM 12 C C8 PG4 . . . C 2 21.037 21.826 19.816 1 80.98 ? C8 PG4 301 A 1 HETATM 13 O O5 PG4 . . . C 2 21.179 21.19 21.035 1 81.86 ? O5 PG4 301 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 432 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 13 #