data_4K08 # _model_server_result.job_id Pl9SP4YArRGM6hBuK-bLgA _model_server_result.datetime_utc '2024-12-21 12:39:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4k08 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 4K08 # _exptl.entry_id 4K08 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4K08 _cell.length_a 50.595 _cell.length_b 50.595 _cell.length_c 112.733 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4K08 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1 A,B,C,D 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ARG 2 A ARG 39 1_555 A N MSE 3 A MSE 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale2 A C MSE 3 A MSE 40 1_555 A N LEU 4 A LEU 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale3 A C ARG 66 A ARG 103 1_555 A N MSE 67 A MSE 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 A C MSE 67 A MSE 104 1_555 A N VAL 68 A VAL 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale5 A C VAL 68 A VAL 105 1_555 A N MSE 69 A MSE 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale6 A C MSE 69 A MSE 106 1_555 A N HIS 70 A HIS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? metalc ? metalc1 A NE2 HIS 24 A HIS 61 1_555 B ZN ZN . A ZN 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc2 B ZN ZN . A ZN 200 1_555 D O HOH . A HOH 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 4K08 _atom_sites.fract_transf_matrix[1][1] 0.019765 _atom_sites.fract_transf_matrix[1][2] 0.011411 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022822 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008871 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 200 200 ZN ZN . C 3 ACT A 1 201 201 ACT ACT . D 4 HOH A 1 301 211 HOH HOH . D 4 HOH A 2 302 212 HOH HOH . D 4 HOH A 3 303 213 HOH HOH . D 4 HOH A 4 304 214 HOH HOH . D 4 HOH A 5 305 215 HOH HOH . D 4 HOH A 6 306 216 HOH HOH . D 4 HOH A 7 307 217 HOH HOH . D 4 HOH A 8 308 218 HOH HOH . D 4 HOH A 9 309 219 HOH HOH . D 4 HOH A 10 310 220 HOH HOH . D 4 HOH A 11 311 221 HOH HOH . D 4 HOH A 12 312 222 HOH HOH . D 4 HOH A 13 313 223 HOH HOH . D 4 HOH A 14 314 224 HOH HOH . D 4 HOH A 15 315 225 HOH HOH . D 4 HOH A 16 316 226 HOH HOH . D 4 HOH A 17 317 227 HOH HOH . D 4 HOH A 18 318 228 HOH HOH . D 4 HOH A 19 319 229 HOH HOH . D 4 HOH A 20 320 230 HOH HOH . D 4 HOH A 21 321 231 HOH HOH . D 4 HOH A 22 322 232 HOH HOH . D 4 HOH A 23 323 233 HOH HOH . D 4 HOH A 24 324 234 HOH HOH . D 4 HOH A 25 325 235 HOH HOH . D 4 HOH A 26 326 236 HOH HOH . D 4 HOH A 27 327 237 HOH HOH . D 4 HOH A 28 328 238 HOH HOH . D 4 HOH A 29 329 239 HOH HOH . D 4 HOH A 30 330 240 HOH HOH . D 4 HOH A 31 331 241 HOH HOH . D 4 HOH A 32 332 242 HOH HOH . D 4 HOH A 33 333 243 HOH HOH . D 4 HOH A 34 334 244 HOH HOH . D 4 HOH A 35 335 245 HOH HOH . D 4 HOH A 36 336 246 HOH HOH . D 4 HOH A 37 337 247 HOH HOH . D 4 HOH A 38 338 248 HOH HOH . D 4 HOH A 39 339 249 HOH HOH . D 4 HOH A 40 340 250 HOH HOH . D 4 HOH A 41 341 251 HOH HOH . D 4 HOH A 42 342 252 HOH HOH . D 4 HOH A 43 343 253 HOH HOH . D 4 HOH A 44 344 254 HOH HOH . D 4 HOH A 45 345 255 HOH HOH . D 4 HOH A 46 346 256 HOH HOH . D 4 HOH A 47 347 257 HOH HOH . D 4 HOH A 48 348 258 HOH HOH . D 4 HOH A 49 349 259 HOH HOH . D 4 HOH A 50 350 260 HOH HOH . D 4 HOH A 51 351 261 HOH HOH . D 4 HOH A 52 352 262 HOH HOH . D 4 HOH A 53 353 263 HOH HOH . D 4 HOH A 54 354 264 HOH HOH . D 4 HOH A 55 355 265 HOH HOH . D 4 HOH A 56 356 266 HOH HOH . D 4 HOH A 57 357 267 HOH HOH . D 4 HOH A 58 358 268 HOH HOH . D 4 HOH A 59 359 269 HOH HOH . D 4 HOH A 60 360 270 HOH HOH . D 4 HOH A 61 361 271 HOH HOH . D 4 HOH A 62 362 272 HOH HOH . D 4 HOH A 63 363 273 HOH HOH . D 4 HOH A 64 364 274 HOH HOH . D 4 HOH A 65 365 275 HOH HOH . D 4 HOH A 66 366 276 HOH HOH . D 4 HOH A 67 367 277 HOH HOH . D 4 HOH A 68 368 278 HOH HOH . D 4 HOH A 69 369 279 HOH HOH . D 4 HOH A 70 370 280 HOH HOH . D 4 HOH A 71 371 281 HOH HOH . D 4 HOH A 72 372 282 HOH HOH . D 4 HOH A 73 373 283 HOH HOH . D 4 HOH A 74 374 284 HOH HOH . D 4 HOH A 75 375 285 HOH HOH . D 4 HOH A 76 376 286 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . C 3 6.038 27.686 13.504 1 27.52 ? C ACT 201 A 1 HETATM 2 O O ACT . . . C 3 7.306 27.813 13.315 1 21.6 ? O ACT 201 A 1 HETATM 3 O OXT ACT . . . C 3 5.255 28.352 12.779 1 22.7 ? OXT ACT 201 A 1 HETATM 4 C CH3 ACT . . . C 3 5.418 26.759 14.559 1 25.11 ? CH3 ACT 201 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #