data_4K0D # _model_server_result.job_id mswieB-57BZyrnKJt4lTuA _model_server_result.datetime_utc '2024-11-05 01:23:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4k0d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 4K0D # _exptl.entry_id 4K0D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.18 _cell.angle_gamma 90 _cell.entry_id 4K0D _cell.length_a 87.693 _cell.length_b 75.184 _cell.length_c 51.031 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4K0D _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_657 -x+1,y,-z+2 -1 0 0 0 1 0 0 0 -1 60.96783 0 98.500848 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 I N N ? 2 J N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ARG 48 A ARG 80 1_555 A N MSE 49 A MSE 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale2 A C MSE 49 A MSE 81 1_555 A N ASP 50 A ASP 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 A C PRO 118 A PRO 150 1_555 A N MSE 119 A MSE 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? covale ? covale4 A C MSE 119 A MSE 151 1_555 A N ARG 120 A ARG 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale5 B C ARG 48 B ARG 80 1_555 B N MSE 49 B MSE 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale6 B C MSE 49 B MSE 81 1_555 B N ASP 50 B ASP 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale7 B C PRO 118 B PRO 150 1_555 B N MSE 119 B MSE 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale8 B C MSE 119 B MSE 151 1_555 B N ARG 120 B ARG 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? metalc ? metalc1 A OD1 ASP 10 A ASP 42 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc2 A OE2 GLU 14 A GLU 46 1_555 C ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.934 ? metalc ? metalc3 A ND1 HIS 32 A HIS 64 1_555 I ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? metalc ? metalc4 A OE2 GLU 74 A GLU 106 1_555 D ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc5 A OE2 GLU 121 A GLU 153 1_555 J ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.812 ? metalc ? metalc6 A ND1 HIS 137 A HIS 169 1_555 D ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc7 C ZN ZN . A ZN 201 1_555 B ND1 HIS 32 B HIS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc8 B OD1 ASP 10 B ASP 42 1_555 I ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? metalc ? metalc9 B OE2 GLU 14 B GLU 46 1_555 I ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.937 ? metalc ? metalc10 B OE1 GLU 74 B GLU 106 1_555 K ZN ZN . B ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc11 B OE1 GLU 121 B GLU 153 1_555 L NA NA . B NA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc12 B OE2 GLU 121 B GLU 153 1_555 L NA NA . B NA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.009 ? metalc ? metalc13 B ND1 HIS 137 B HIS 169 1_555 K ZN ZN . B ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc14 B ND1 HIS 143 B HIS 175 1_555 J ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc15 K ZN ZN . B ZN 203 1_555 M O ACT . B ACT 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc16 K ZN ZN . B ZN 203 1_555 N O ACT . B ACT 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc17 L NA NA . B NA 204 1_555 P O HOH . B HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.086 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4K0D _atom_sites.fract_transf_matrix[1][1] 0.011403 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003094 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013301 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020304 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 201 200 ZN ZN . D 2 ZN A 1 202 203 ZN ZN . E 3 CL A 1 203 208 CL CL . F 3 CL A 1 204 209 CL CL . G 3 CL A 1 205 210 CL CL . H 3 CL A 1 206 211 CL CL . I 2 ZN B 1 201 201 ZN ZN . J 2 ZN B 1 202 202 ZN ZN . K 2 ZN B 1 203 204 ZN ZN . L 4 NA B 1 204 205 NA NA . M 5 ACT B 1 205 301 ACT ACT . N 5 ACT B 1 206 302 ACT ACT . O 6 HOH A 1 301 250 HOH HOH . O 6 HOH A 2 302 2 HOH HOH . O 6 HOH A 3 303 3 HOH HOH . O 6 HOH A 4 304 5 HOH HOH . O 6 HOH A 5 305 8 HOH HOH . O 6 HOH A 6 306 14 HOH HOH . O 6 HOH A 7 307 16 HOH HOH . O 6 HOH A 8 308 17 HOH HOH . O 6 HOH A 9 309 18 HOH HOH . O 6 HOH A 10 310 19 HOH HOH . O 6 HOH A 11 311 21 HOH HOH . O 6 HOH A 12 312 25 HOH HOH . O 6 HOH A 13 313 28 HOH HOH . O 6 HOH A 14 314 29 HOH HOH . O 6 HOH A 15 315 31 HOH HOH . O 6 HOH A 16 316 33 HOH HOH . O 6 HOH A 17 317 35 HOH HOH . O 6 HOH A 18 318 36 HOH HOH . O 6 HOH A 19 319 37 HOH HOH . O 6 HOH A 20 320 38 HOH HOH . O 6 HOH A 21 321 39 HOH HOH . O 6 HOH A 22 322 40 HOH HOH . O 6 HOH A 23 323 43 HOH HOH . O 6 HOH A 24 324 45 HOH HOH . O 6 HOH A 25 325 46 HOH HOH . O 6 HOH A 26 326 47 HOH HOH . O 6 HOH A 27 327 60 HOH HOH . O 6 HOH A 28 328 62 HOH HOH . O 6 HOH A 29 329 63 HOH HOH . O 6 HOH A 30 330 72 HOH HOH . O 6 HOH A 31 331 73 HOH HOH . O 6 HOH A 32 332 74 HOH HOH . O 6 HOH A 33 333 76 HOH HOH . O 6 HOH A 34 334 77 HOH HOH . O 6 HOH A 35 335 81 HOH HOH . O 6 HOH A 36 336 84 HOH HOH . O 6 HOH A 37 337 85 HOH HOH . O 6 HOH A 38 338 86 HOH HOH . O 6 HOH A 39 339 87 HOH HOH . O 6 HOH A 40 340 91 HOH HOH . O 6 HOH A 41 341 92 HOH HOH . O 6 HOH A 42 342 93 HOH HOH . O 6 HOH A 43 343 96 HOH HOH . O 6 HOH A 44 344 97 HOH HOH . O 6 HOH A 45 345 101 HOH HOH . O 6 HOH A 46 346 102 HOH HOH . O 6 HOH A 47 347 103 HOH HOH . O 6 HOH A 48 348 105 HOH HOH . O 6 HOH A 49 349 106 HOH HOH . O 6 HOH A 50 350 108 HOH HOH . O 6 HOH A 51 351 111 HOH HOH . O 6 HOH A 52 352 114 HOH HOH . O 6 HOH A 53 353 116 HOH HOH . O 6 HOH A 54 354 118 HOH HOH . O 6 HOH A 55 355 125 HOH HOH . O 6 HOH A 56 356 126 HOH HOH . O 6 HOH A 57 357 127 HOH HOH . O 6 HOH A 58 358 132 HOH HOH . O 6 HOH A 59 359 133 HOH HOH . O 6 HOH A 60 360 134 HOH HOH . O 6 HOH A 61 361 135 HOH HOH . O 6 HOH A 62 362 142 HOH HOH . O 6 HOH A 63 363 143 HOH HOH . O 6 HOH A 64 364 144 HOH HOH . O 6 HOH A 65 365 145 HOH HOH . O 6 HOH A 66 366 146 HOH HOH . O 6 HOH A 67 367 147 HOH HOH . O 6 HOH A 68 368 148 HOH HOH . O 6 HOH A 69 369 149 HOH HOH . O 6 HOH A 70 370 151 HOH HOH . O 6 HOH A 71 371 152 HOH HOH . O 6 HOH A 72 372 153 HOH HOH . O 6 HOH A 73 373 159 HOH HOH . O 6 HOH A 74 374 160 HOH HOH . O 6 HOH A 75 375 161 HOH HOH . O 6 HOH A 76 376 162 HOH HOH . O 6 HOH A 77 377 163 HOH HOH . O 6 HOH A 78 378 166 HOH HOH . O 6 HOH A 79 379 170 HOH HOH . O 6 HOH A 80 380 171 HOH HOH . O 6 HOH A 81 381 174 HOH HOH . O 6 HOH A 82 382 178 HOH HOH . O 6 HOH A 83 383 182 HOH HOH . O 6 HOH A 84 384 183 HOH HOH . O 6 HOH A 85 385 185 HOH HOH . O 6 HOH A 86 386 187 HOH HOH . O 6 HOH A 87 387 188 HOH HOH . O 6 HOH A 88 388 189 HOH HOH . O 6 HOH A 89 389 190 HOH HOH . O 6 HOH A 90 390 191 HOH HOH . O 6 HOH A 91 391 192 HOH HOH . O 6 HOH A 92 392 193 HOH HOH . O 6 HOH A 93 393 194 HOH HOH . O 6 HOH A 94 394 206 HOH HOH . O 6 HOH A 95 395 207 HOH HOH . O 6 HOH A 96 396 208 HOH HOH . O 6 HOH A 97 397 209 HOH HOH . O 6 HOH A 98 398 210 HOH HOH . O 6 HOH A 99 399 217 HOH HOH . O 6 HOH A 100 400 218 HOH HOH . O 6 HOH A 101 401 20 HOH HOH . O 6 HOH A 102 402 123 HOH HOH . O 6 HOH A 103 403 140 HOH HOH . O 6 HOH A 104 404 205 HOH HOH . P 6 HOH B 1 301 32 HOH HOH . P 6 HOH B 2 302 34 HOH HOH . P 6 HOH B 3 303 42 HOH HOH . P 6 HOH B 4 304 44 HOH HOH . P 6 HOH B 5 305 128 HOH HOH . P 6 HOH B 6 306 213 HOH HOH . P 6 HOH B 7 307 1 HOH HOH . P 6 HOH B 8 308 4 HOH HOH . P 6 HOH B 9 309 6 HOH HOH . P 6 HOH B 10 310 7 HOH HOH . P 6 HOH B 11 311 9 HOH HOH . P 6 HOH B 12 312 10 HOH HOH . P 6 HOH B 13 313 11 HOH HOH . P 6 HOH B 14 314 13 HOH HOH . P 6 HOH B 15 315 15 HOH HOH . P 6 HOH B 16 316 22 HOH HOH . P 6 HOH B 17 317 23 HOH HOH . P 6 HOH B 18 318 26 HOH HOH . P 6 HOH B 19 319 27 HOH HOH . P 6 HOH B 20 320 30 HOH HOH . P 6 HOH B 21 321 41 HOH HOH . P 6 HOH B 22 322 48 HOH HOH . P 6 HOH B 23 323 49 HOH HOH . P 6 HOH B 24 324 50 HOH HOH . P 6 HOH B 25 325 51 HOH HOH . P 6 HOH B 26 326 52 HOH HOH . P 6 HOH B 27 327 53 HOH HOH . P 6 HOH B 28 328 54 HOH HOH . P 6 HOH B 29 329 55 HOH HOH . P 6 HOH B 30 330 56 HOH HOH . P 6 HOH B 31 331 57 HOH HOH . P 6 HOH B 32 332 58 HOH HOH . P 6 HOH B 33 333 59 HOH HOH . P 6 HOH B 34 334 61 HOH HOH . P 6 HOH B 35 335 64 HOH HOH . P 6 HOH B 36 336 65 HOH HOH . P 6 HOH B 37 337 66 HOH HOH . P 6 HOH B 38 338 67 HOH HOH . P 6 HOH B 39 339 68 HOH HOH . P 6 HOH B 40 340 69 HOH HOH . P 6 HOH B 41 341 70 HOH HOH . P 6 HOH B 42 342 71 HOH HOH . P 6 HOH B 43 343 75 HOH HOH . P 6 HOH B 44 344 78 HOH HOH . P 6 HOH B 45 345 79 HOH HOH . P 6 HOH B 46 346 80 HOH HOH . P 6 HOH B 47 347 82 HOH HOH . P 6 HOH B 48 348 83 HOH HOH . P 6 HOH B 49 349 88 HOH HOH . P 6 HOH B 50 350 89 HOH HOH . P 6 HOH B 51 351 90 HOH HOH . P 6 HOH B 52 352 94 HOH HOH . P 6 HOH B 53 353 95 HOH HOH . P 6 HOH B 54 354 98 HOH HOH . P 6 HOH B 55 355 99 HOH HOH . P 6 HOH B 56 356 100 HOH HOH . P 6 HOH B 57 357 104 HOH HOH . P 6 HOH B 58 358 109 HOH HOH . P 6 HOH B 59 359 110 HOH HOH . P 6 HOH B 60 360 112 HOH HOH . P 6 HOH B 61 361 113 HOH HOH . P 6 HOH B 62 362 115 HOH HOH . P 6 HOH B 63 363 117 HOH HOH . P 6 HOH B 64 364 119 HOH HOH . P 6 HOH B 65 365 120 HOH HOH . P 6 HOH B 66 366 121 HOH HOH . P 6 HOH B 67 367 122 HOH HOH . P 6 HOH B 68 368 124 HOH HOH . P 6 HOH B 69 369 129 HOH HOH . P 6 HOH B 70 370 131 HOH HOH . P 6 HOH B 71 371 136 HOH HOH . P 6 HOH B 72 372 137 HOH HOH . P 6 HOH B 73 373 138 HOH HOH . P 6 HOH B 74 374 139 HOH HOH . P 6 HOH B 75 375 141 HOH HOH . P 6 HOH B 76 376 150 HOH HOH . P 6 HOH B 77 377 154 HOH HOH . P 6 HOH B 78 378 155 HOH HOH . P 6 HOH B 79 379 156 HOH HOH . P 6 HOH B 80 380 157 HOH HOH . P 6 HOH B 81 381 158 HOH HOH . P 6 HOH B 82 382 164 HOH HOH . P 6 HOH B 83 383 165 HOH HOH . P 6 HOH B 84 384 167 HOH HOH . P 6 HOH B 85 385 168 HOH HOH . P 6 HOH B 86 386 169 HOH HOH . P 6 HOH B 87 387 172 HOH HOH . P 6 HOH B 88 388 173 HOH HOH . P 6 HOH B 89 389 176 HOH HOH . P 6 HOH B 90 390 177 HOH HOH . P 6 HOH B 91 391 179 HOH HOH . P 6 HOH B 92 392 180 HOH HOH . P 6 HOH B 93 393 181 HOH HOH . P 6 HOH B 94 394 186 HOH HOH . P 6 HOH B 95 395 195 HOH HOH . P 6 HOH B 96 396 196 HOH HOH . P 6 HOH B 97 397 197 HOH HOH . P 6 HOH B 98 398 198 HOH HOH . P 6 HOH B 99 399 199 HOH HOH . P 6 HOH B 100 400 200 HOH HOH . P 6 HOH B 101 401 201 HOH HOH . P 6 HOH B 102 402 202 HOH HOH . P 6 HOH B 103 403 203 HOH HOH . P 6 HOH B 104 404 204 HOH HOH . P 6 HOH B 105 405 214 HOH HOH . P 6 HOH B 106 406 215 HOH HOH . P 6 HOH B 107 407 216 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 34.082 _atom_site.Cartn_y 89.612 _atom_site.Cartn_z 36.215 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 49.99 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #