data_4K19 # _model_server_result.job_id zH5TUYJMtbRc_Mbx2CQ9ww _model_server_result.datetime_utc '2024-10-18 04:31:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4k19 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":206}' # _entry.id 4K19 # _exptl.entry_id 4K19 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 622.622 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4S,5R)-N,N-bis{3-[(2,3-dihydroxybenzoyl)amino]propyl}-2-(2,3-dihydroxyphenyl)-5-methyl-4,5-dihydro-1,3-oxazole-4-carboxamide _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4K19 _cell.length_a 114.2 _cell.length_b 114.2 _cell.length_c 119.3 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4K19 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,I,S 1 1 B,J,K,T 2 1 C,L,M,N,O,P,Q,R,U 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 I N N ? 6 K N N ? 6 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 78 A CYS 76 1_555 A SG CYS 177 A CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 B SG CYS 78 B CYS 76 1_555 B SG CYS 177 B CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf3 C SG CYS 78 C CYS 76 1_555 C SG CYS 177 C CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc1 D FE FE . A FE 201 1_555 I O42 1OD . A 1OD 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.707 ? metalc ? metalc2 L FE FE . C FE 201 1_555 R O42 1OD . C 1OD 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.728 ? metalc ? metalc3 L FE FE . C FE 201 1_555 R O44 1OD . C 1OD 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? metalc ? metalc4 L FE FE . C FE 201 1_555 R O28 1OD . C 1OD 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.95 ? metalc ? metalc5 J FE FE . B FE 201 1_555 K O28 1OD . B 1OD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? metalc ? metalc6 J FE FE . B FE 201 1_555 K O27 1OD . B 1OD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc7 D FE FE . A FE 201 1_555 I O44 1OD . A 1OD 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc8 J FE FE . B FE 201 1_555 K O42 1OD . B 1OD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc9 L FE FE . C FE 201 1_555 R O27 1OD . C 1OD 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc10 D FE FE . A FE 201 1_555 I O28 1OD . A 1OD 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc11 L FE FE . C FE 201 1_555 R O45 1OD . C 1OD 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc12 D FE FE . A FE 201 1_555 I O45 1OD . A 1OD 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc13 J FE FE . B FE 201 1_555 K O41 1OD . B 1OD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc14 J FE FE . B FE 201 1_555 K O44 1OD . B 1OD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc15 D FE FE . A FE 201 1_555 I O27 1OD . A 1OD 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc16 J FE FE . B FE 201 1_555 K O45 1OD . B 1OD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc17 L FE FE . C FE 201 1_555 R O41 1OD . C 1OD 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? # _chem_comp.formula 'C31 H34 N4 O10' _chem_comp.formula_weight 622.622 _chem_comp.id 1OD _chem_comp.mon_nstd_flag . _chem_comp.name (4S,5R)-N,N-bis{3-[(2,3-dihydroxybenzoyl)amino]propyl}-2-(2,3-dihydroxyphenyl)-5-methyl-4,5-dihydro-1,3-oxazole-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms fluvibactin # _atom_sites.entry_id 4K19 _atom_sites.fract_transf_matrix[1][1] 0.008757 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008757 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008382 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 FE A 1 201 201 FE FE . E 3 GOL A 1 202 202 GOL GOL . F 4 SO4 A 1 203 203 SO4 SO4 . G 5 CL A 1 204 204 CL CL . H 3 GOL A 1 205 205 GOL GOL . I 6 1OD A 1 206 206 1OD 1OD . J 2 FE B 1 201 201 FE FE . K 6 1OD B 1 202 202 1OD 1OD . L 2 FE C 1 201 201 FE FE . M 4 SO4 C 1 202 202 SO4 SO4 . N 5 CL C 1 203 203 CL CL . O 7 NA C 1 204 204 NA NA . P 7 NA C 1 205 205 NA NA . Q 3 GOL C 1 206 206 GOL GOL . R 6 1OD C 1 207 207 1OD 1OD . S 8 HOH A 1 301 301 HOH HOH . S 8 HOH A 2 302 302 HOH HOH . S 8 HOH A 3 303 303 HOH HOH . S 8 HOH A 4 304 304 HOH HOH . S 8 HOH A 5 305 305 HOH HOH . S 8 HOH A 6 306 306 HOH HOH . S 8 HOH A 7 307 307 HOH HOH . S 8 HOH A 8 308 308 HOH HOH . S 8 HOH A 9 309 309 HOH HOH . S 8 HOH A 10 310 310 HOH HOH . S 8 HOH A 11 311 311 HOH HOH . S 8 HOH A 12 312 312 HOH HOH . S 8 HOH A 13 313 313 HOH HOH . S 8 HOH A 14 314 314 HOH HOH . S 8 HOH A 15 315 315 HOH HOH . S 8 HOH A 16 316 316 HOH HOH . S 8 HOH A 17 317 317 HOH HOH . S 8 HOH A 18 318 318 HOH HOH . S 8 HOH A 19 319 319 HOH HOH . T 8 HOH B 1 301 301 HOH HOH . T 8 HOH B 2 302 302 HOH HOH . T 8 HOH B 3 303 303 HOH HOH . T 8 HOH B 4 304 304 HOH HOH . T 8 HOH B 5 305 305 HOH HOH . U 8 HOH C 1 301 301 HOH HOH . U 8 HOH C 2 302 302 HOH HOH . U 8 HOH C 3 303 303 HOH HOH . U 8 HOH C 4 304 304 HOH HOH . U 8 HOH C 5 305 305 HOH HOH . U 8 HOH C 6 306 306 HOH HOH . U 8 HOH C 7 307 307 HOH HOH . U 8 HOH C 8 308 308 HOH HOH . U 8 HOH C 9 309 309 HOH HOH . U 8 HOH C 10 310 310 HOH HOH . U 8 HOH C 11 311 311 HOH HOH . U 8 HOH C 12 312 312 HOH HOH . U 8 HOH C 13 313 313 HOH HOH . U 8 HOH C 14 314 314 HOH HOH . U 8 HOH C 15 315 315 HOH HOH . U 8 HOH C 16 316 316 HOH HOH . U 8 HOH C 17 317 317 HOH HOH . U 8 HOH C 18 318 318 HOH HOH . U 8 HOH C 19 319 319 HOH HOH . U 8 HOH C 20 320 320 HOH HOH . U 8 HOH C 21 321 321 HOH HOH . U 8 HOH C 22 322 322 HOH HOH . U 8 HOH C 23 323 323 HOH HOH . U 8 HOH C 24 324 324 HOH HOH . U 8 HOH C 25 325 325 HOH HOH . U 8 HOH C 26 326 326 HOH HOH . U 8 HOH C 27 327 327 HOH HOH . U 8 HOH C 28 328 328 HOH HOH . U 8 HOH C 29 329 329 HOH HOH . U 8 HOH C 30 330 330 HOH HOH . U 8 HOH C 31 331 331 HOH HOH . U 8 HOH C 32 332 332 HOH HOH . U 8 HOH C 33 333 333 HOH HOH . U 8 HOH C 34 334 334 HOH HOH . U 8 HOH C 35 335 335 HOH HOH . U 8 HOH C 36 336 336 HOH HOH . U 8 HOH C 37 337 337 HOH HOH . U 8 HOH C 38 338 338 HOH HOH . U 8 HOH C 39 339 339 HOH HOH . U 8 HOH C 40 340 340 HOH HOH . U 8 HOH C 41 341 341 HOH HOH . U 8 HOH C 42 342 342 HOH HOH . U 8 HOH C 43 343 343 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O34 1OD . . . I 6 31.05 80.977 64.274 1 54.46 ? O34 1OD 206 A 1 HETATM 2 C C33 1OD . . . I 6 30.119 80.283 64.662 1 51.74 ? C33 1OD 206 A 1 HETATM 3 C C35 1OD . . . I 6 28.905 80.128 63.774 1 43.26 ? C35 1OD 206 A 1 HETATM 4 C C40 1OD . . . I 6 28.559 81.159 62.905 1 40.18 ? C40 1OD 206 A 1 HETATM 5 C C39 1OD . . . I 6 27.437 81.041 62.085 1 37.25 ? C39 1OD 206 A 1 HETATM 6 C C38 1OD . . . I 6 26.651 79.898 62.122 1 32.64 ? C38 1OD 206 A 1 HETATM 7 C C37 1OD . . . I 6 27.001 78.873 62.985 1 35.18 ? C37 1OD 206 A 1 HETATM 8 O O41 1OD . . . I 6 26.246 77.743 63.028 1 35.59 ? O41 1OD 206 A 1 HETATM 9 C C36 1OD . . . I 6 28.114 78.987 63.802 1 38.47 ? C36 1OD 206 A 1 HETATM 10 O O42 1OD . . . I 6 28.415 77.954 64.636 1 41.01 ? O42 1OD 206 A 1 HETATM 11 N N32 1OD . . . I 6 30.154 79.69 65.864 1 55.93 ? N32 1OD 206 A 1 HETATM 12 C C31 1OD . . . I 6 31.217 79.71 66.866 1 55.86 ? C31 1OD 206 A 1 HETATM 13 C C30 1OD . . . I 6 30.567 79.626 68.252 1 56.13 ? C30 1OD 206 A 1 HETATM 14 C C29 1OD . . . I 6 30.356 78.18 68.725 1 54.85 ? C29 1OD 206 A 1 HETATM 15 N N14 1OD . . . I 6 30.177 78.063 70.184 1 51.5 ? N14 1OD 206 A 1 HETATM 16 C C12 1OD . . . I 6 30.321 76.922 70.881 1 47.14 ? C12 1OD 206 A 1 HETATM 17 O O13 1OD . . . I 6 30.136 76.915 72.087 1 49.48 ? O13 1OD 206 A 1 HETATM 18 C C10 1OD . . . I 6 30.671 75.588 70.268 1 44.38 ? C10 1OD 206 A 1 HETATM 19 C C9 1OD . . . I 6 32.181 75.32 70.257 1 43.36 ? C9 1OD 206 A 1 HETATM 20 C C43 1OD . . . I 6 32.612 74.355 71.355 1 42.7 ? C43 1OD 206 A 1 HETATM 21 O O8 1OD . . . I 6 32.489 74.75 68.986 1 40.98 ? O8 1OD 206 A 1 HETATM 22 N N11 1OD . . . I 6 30.328 75.388 68.866 1 42.58 ? N11 1OD 206 A 1 HETATM 23 C C7 1OD . . . I 6 31.296 74.95 68.195 1 38.99 ? C7 1OD 206 A 1 HETATM 24 C C1 1OD . . . I 6 31.251 74.662 66.726 1 35 ? C1 1OD 206 A 1 HETATM 25 C C6 1OD . . . I 6 30.231 75.155 65.927 1 31.94 ? C6 1OD 206 A 1 HETATM 26 O O44 1OD . . . I 6 29.234 75.939 66.414 1 31.75 ? O44 1OD 206 A 1 HETATM 27 C C5 1OD . . . I 6 30.201 74.862 64.587 1 32.37 ? C5 1OD 206 A 1 HETATM 28 O O45 1OD . . . I 6 29.19 75.385 63.842 1 34 ? O45 1OD 206 A 1 HETATM 29 C C4 1OD . . . I 6 31.191 74.069 64.019 1 35.1 ? C4 1OD 206 A 1 HETATM 30 C C3 1OD . . . I 6 32.221 73.571 64.812 1 35.18 ? C3 1OD 206 A 1 HETATM 31 C C2 1OD . . . I 6 32.248 73.87 66.17 1 34.82 ? C2 1OD 206 A 1 HETATM 32 C C15 1OD . . . I 6 29.809 79.274 70.927 1 49.23 ? C15 1OD 206 A 1 HETATM 33 C C16 1OD . . . I 6 28.347 79.133 71.36 1 47.86 ? C16 1OD 206 A 1 HETATM 34 C C17 1OD . . . I 6 27.379 79.723 70.335 1 45.42 ? C17 1OD 206 A 1 HETATM 35 N N18 1OD . . . I 6 26.824 78.607 69.578 1 42.85 ? N18 1OD 206 A 1 HETATM 36 C C19 1OD . . . I 6 25.567 78.165 69.618 1 40.61 ? C19 1OD 206 A 1 HETATM 37 O O20 1OD . . . I 6 24.76 78.67 70.385 1 40.66 ? O20 1OD 206 A 1 HETATM 38 C C21 1OD . . . I 6 25.147 76.992 68.769 1 37.12 ? C21 1OD 206 A 1 HETATM 39 C C26 1OD . . . I 6 25.875 76.579 67.66 1 34.15 ? C26 1OD 206 A 1 HETATM 40 O O27 1OD . . . I 6 27.001 77.239 67.282 1 32.02 ? O27 1OD 206 A 1 HETATM 41 C C25 1OD . . . I 6 25.476 75.469 66.932 1 35.78 ? C25 1OD 206 A 1 HETATM 42 O O28 1OD . . . I 6 26.201 75.066 65.848 1 39 ? O28 1OD 206 A 1 HETATM 43 C C24 1OD . . . I 6 24.328 74.772 67.289 1 35.52 ? C24 1OD 206 A 1 HETATM 44 C C23 1OD . . . I 6 23.584 75.187 68.385 1 36.13 ? C23 1OD 206 A 1 HETATM 45 C C22 1OD . . . I 6 23.995 76.292 69.12 1 37.07 ? C22 1OD 206 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 45 #