data_4K1E
#
_model_server_result.job_id            a8JKRxOlKIDdRw9F7T_4uw 
_model_server_result.datetime_utc      '2024-11-05 05:41:23' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4k1e 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    4K1E 
#
_exptl.entry_id    4K1E 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.174 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4S)-2-METHYL-2,4-PENTANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          115.66 
_cell.angle_gamma         90 
_cell.entry_id            4K1E 
_cell.length_a            39.78 
_cell.length_b            63.306 
_cell.length_c            41.181 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4K1E 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 137 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf2 A SG CYS 26 A CYS 42 1_555 A SG CYS 42 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf3 A SG CYS 111 A CYS 128 1_555 A SG CYS 211 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf4 A SG CYS 118 A CYS 136 1_555 A SG CYS 183 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf5 A SG CYS 148 A CYS 168 1_555 A SG CYS 162 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
disulf ? disulf6 A SG CYS 173 A CYS 191 1_555 A SG CYS 198 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
disulf ? disulf7 B SG CYS 3 B CYS 3 1_555 B SG CYS 11 B CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
covale ? covale1 B N GLY 1 B GLY 1 1_555 B C ASP 14 B ASP 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.363 ? 
metalc ? metalc1 A O VAL 19 A VAL 34 1_555 D LI LI . A LI 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? 
#
_chem_comp.formula           'C6 H14 O2' 
_chem_comp.formula_weight    118.174 
_chem_comp.id                MPD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4S)-2-METHYL-2,4-PENTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MPD sing 237 n n 
C1 H11 MPD sing 238 n n 
C1 H12 MPD sing 239 n n 
C1 H13 MPD sing 240 n n 
C2 O2 MPD sing 241 n n 
C2 CM MPD sing 242 n n 
C2 C3 MPD sing 243 n n 
O2 HO2 MPD sing 244 n n 
CM HM1 MPD sing 245 n n 
CM HM2 MPD sing 246 n n 
CM HM3 MPD sing 247 n n 
C3 C4 MPD sing 248 n n 
C3 H31 MPD sing 249 n n 
C3 H32 MPD sing 250 n n 
C4 O4 MPD sing 251 n n 
C4 C5 MPD sing 252 n n 
C4 H4 MPD sing 253 n n 
O4 HO4 MPD sing 254 n n 
C5 H51 MPD sing 255 n n 
C5 H52 MPD sing 256 n n 
C5 H53 MPD sing 257 n n 
#
_atom_sites.entry_id                     4K1E 
_atom_sites.fract_transf_matrix[1][1]    0.025138 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.012077 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015796 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.02694 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 MPD A 1 301 1 MPD MPD . 
D 4 LI A 1 302 1 LI LI . 
E 5 HOH A 1 401 1 HOH HOH . 
E 5 HOH A 2 402 2 HOH HOH . 
E 5 HOH A 3 403 3 HOH HOH . 
E 5 HOH A 4 404 4 HOH HOH . 
E 5 HOH A 5 405 5 HOH HOH . 
E 5 HOH A 6 406 6 HOH HOH . 
E 5 HOH A 7 407 7 HOH HOH . 
E 5 HOH A 8 408 8 HOH HOH . 
E 5 HOH A 9 409 9 HOH HOH . 
E 5 HOH A 10 410 10 HOH HOH . 
E 5 HOH A 11 411 11 HOH HOH . 
E 5 HOH A 12 412 12 HOH HOH . 
E 5 HOH A 13 413 13 HOH HOH . 
E 5 HOH A 14 414 14 HOH HOH . 
E 5 HOH A 15 415 15 HOH HOH . 
E 5 HOH A 16 416 17 HOH HOH . 
E 5 HOH A 17 417 18 HOH HOH . 
E 5 HOH A 18 418 19 HOH HOH . 
E 5 HOH A 19 419 20 HOH HOH . 
E 5 HOH A 20 420 21 HOH HOH . 
E 5 HOH A 21 421 22 HOH HOH . 
E 5 HOH A 22 422 23 HOH HOH . 
E 5 HOH A 23 423 24 HOH HOH . 
E 5 HOH A 24 424 25 HOH HOH . 
E 5 HOH A 25 425 26 HOH HOH . 
E 5 HOH A 26 426 27 HOH HOH . 
E 5 HOH A 27 427 28 HOH HOH . 
E 5 HOH A 28 428 29 HOH HOH . 
E 5 HOH A 29 429 30 HOH HOH . 
E 5 HOH A 30 430 31 HOH HOH . 
E 5 HOH A 31 431 32 HOH HOH . 
E 5 HOH A 32 432 33 HOH HOH . 
E 5 HOH A 33 433 34 HOH HOH . 
E 5 HOH A 34 434 35 HOH HOH . 
E 5 HOH A 35 435 36 HOH HOH . 
E 5 HOH A 36 436 37 HOH HOH . 
E 5 HOH A 37 437 39 HOH HOH . 
E 5 HOH A 38 438 40 HOH HOH . 
E 5 HOH A 39 439 41 HOH HOH . 
E 5 HOH A 40 440 42 HOH HOH . 
E 5 HOH A 41 441 43 HOH HOH . 
E 5 HOH A 42 442 44 HOH HOH . 
E 5 HOH A 43 443 45 HOH HOH . 
E 5 HOH A 44 444 46 HOH HOH . 
E 5 HOH A 45 445 47 HOH HOH . 
E 5 HOH A 46 446 48 HOH HOH . 
E 5 HOH A 47 447 49 HOH HOH . 
E 5 HOH A 48 448 50 HOH HOH . 
E 5 HOH A 49 449 52 HOH HOH . 
E 5 HOH A 50 450 53 HOH HOH . 
E 5 HOH A 51 451 54 HOH HOH . 
E 5 HOH A 52 452 55 HOH HOH . 
E 5 HOH A 53 453 56 HOH HOH . 
E 5 HOH A 54 454 57 HOH HOH . 
E 5 HOH A 55 455 58 HOH HOH . 
E 5 HOH A 56 456 59 HOH HOH . 
E 5 HOH A 57 457 60 HOH HOH . 
E 5 HOH A 58 458 61 HOH HOH . 
E 5 HOH A 59 459 62 HOH HOH . 
E 5 HOH A 60 460 63 HOH HOH . 
E 5 HOH A 61 461 64 HOH HOH . 
E 5 HOH A 62 462 65 HOH HOH . 
E 5 HOH A 63 463 66 HOH HOH . 
E 5 HOH A 64 464 67 HOH HOH . 
E 5 HOH A 65 465 68 HOH HOH . 
E 5 HOH A 66 466 69 HOH HOH . 
E 5 HOH A 67 467 70 HOH HOH . 
E 5 HOH A 68 468 71 HOH HOH . 
E 5 HOH A 69 469 73 HOH HOH . 
E 5 HOH A 70 470 74 HOH HOH . 
E 5 HOH A 71 471 75 HOH HOH . 
E 5 HOH A 72 472 76 HOH HOH . 
E 5 HOH A 73 473 77 HOH HOH . 
E 5 HOH A 74 474 78 HOH HOH . 
E 5 HOH A 75 475 79 HOH HOH . 
E 5 HOH A 76 476 80 HOH HOH . 
E 5 HOH A 77 477 81 HOH HOH . 
E 5 HOH A 78 478 82 HOH HOH . 
E 5 HOH A 79 479 83 HOH HOH . 
E 5 HOH A 80 480 84 HOH HOH . 
E 5 HOH A 81 481 85 HOH HOH . 
E 5 HOH A 82 482 86 HOH HOH . 
E 5 HOH A 83 483 87 HOH HOH . 
E 5 HOH A 84 484 88 HOH HOH . 
E 5 HOH A 85 485 89 HOH HOH . 
E 5 HOH A 86 486 90 HOH HOH . 
E 5 HOH A 87 487 91 HOH HOH . 
E 5 HOH A 88 488 92 HOH HOH . 
E 5 HOH A 89 489 93 HOH HOH . 
E 5 HOH A 90 490 94 HOH HOH . 
E 5 HOH A 91 491 95 HOH HOH . 
E 5 HOH A 92 492 96 HOH HOH . 
E 5 HOH A 93 493 98 HOH HOH . 
E 5 HOH A 94 494 99 HOH HOH . 
E 5 HOH A 95 495 100 HOH HOH . 
E 5 HOH A 96 496 101 HOH HOH . 
E 5 HOH A 97 497 102 HOH HOH . 
E 5 HOH A 98 498 103 HOH HOH . 
E 5 HOH A 99 499 104 HOH HOH . 
E 5 HOH A 100 500 105 HOH HOH . 
E 5 HOH A 101 501 106 HOH HOH . 
E 5 HOH A 102 502 107 HOH HOH . 
E 5 HOH A 103 503 108 HOH HOH . 
E 5 HOH A 104 504 109 HOH HOH . 
E 5 HOH A 105 505 110 HOH HOH . 
E 5 HOH A 106 506 111 HOH HOH . 
E 5 HOH A 107 507 112 HOH HOH . 
E 5 HOH A 108 508 113 HOH HOH . 
E 5 HOH A 109 509 114 HOH HOH . 
E 5 HOH A 110 510 115 HOH HOH . 
E 5 HOH A 111 511 116 HOH HOH . 
F 5 HOH B 1 101 97 HOH HOH . 
F 5 HOH B 2 102 16 HOH HOH . 
F 5 HOH B 3 103 38 HOH HOH . 
F 5 HOH B 4 104 51 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MPD . . . C 3 -7.514 -35.835 -19.519 1 20.12 ? C1 MPD 301 A 1 
HETATM 2 C C2 MPD . . . C 3 -6.141 -35.196 -19.33 1 24.37 ? C2 MPD 301 A 1 
HETATM 3 O O2 MPD . . . C 3 -5.663 -35.448 -17.984 1 29.17 ? O2 MPD 301 A 1 
HETATM 4 C CM MPD . . . C 3 -5.154 -35.813 -20.313 1 32.99 ? CM MPD 301 A 1 
HETATM 5 C C3 MPD . . . C 3 -6.179 -33.693 -19.575 1 28.53 ? C3 MPD 301 A 1 
HETATM 6 C C4 MPD . . . C 3 -7.217 -32.928 -18.761 1 29.57 ? C4 MPD 301 A 1 
HETATM 7 O O4 MPD . . . C 3 -7.102 -33.176 -17.377 1 22.47 ? O4 MPD 301 A 1 
HETATM 8 C C5 MPD . . . C 3 -7.012 -31.443 -19.016 1 37.27 ? C5 MPD 301 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           293 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#