data_4K1E # _model_server_result.job_id xvYfuOojEKfDxqIo3FPMwg _model_server_result.datetime_utc '2024-11-05 05:33:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4k1e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 4K1E # _exptl.entry_id 4K1E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 6.941 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'LITHIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.66 _cell.angle_gamma 90 _cell.entry_id 4K1E _cell.length_a 39.78 _cell.length_b 63.306 _cell.length_c 41.181 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4K1E _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 137 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf2 A SG CYS 26 A CYS 42 1_555 A SG CYS 42 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 A SG CYS 111 A CYS 128 1_555 A SG CYS 211 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf4 A SG CYS 118 A CYS 136 1_555 A SG CYS 183 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 A SG CYS 148 A CYS 168 1_555 A SG CYS 162 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf6 A SG CYS 173 A CYS 191 1_555 A SG CYS 198 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? disulf ? disulf7 B SG CYS 3 B CYS 3 1_555 B SG CYS 11 B CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? covale ? covale1 B N GLY 1 B GLY 1 1_555 B C ASP 14 B ASP 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.363 ? metalc ? metalc1 A O VAL 19 A VAL 34 1_555 D LI LI . A LI 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? # _chem_comp.formula 'Li 1' _chem_comp.formula_weight 6.941 _chem_comp.id LI _chem_comp.mon_nstd_flag . _chem_comp.name 'LITHIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4K1E _atom_sites.fract_transf_matrix[1][1] 0.025138 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.012077 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015796 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02694 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MPD A 1 301 1 MPD MPD . D 4 LI A 1 302 1 LI LI . E 5 HOH A 1 401 1 HOH HOH . E 5 HOH A 2 402 2 HOH HOH . E 5 HOH A 3 403 3 HOH HOH . E 5 HOH A 4 404 4 HOH HOH . E 5 HOH A 5 405 5 HOH HOH . E 5 HOH A 6 406 6 HOH HOH . E 5 HOH A 7 407 7 HOH HOH . E 5 HOH A 8 408 8 HOH HOH . E 5 HOH A 9 409 9 HOH HOH . E 5 HOH A 10 410 10 HOH HOH . E 5 HOH A 11 411 11 HOH HOH . E 5 HOH A 12 412 12 HOH HOH . E 5 HOH A 13 413 13 HOH HOH . E 5 HOH A 14 414 14 HOH HOH . E 5 HOH A 15 415 15 HOH HOH . E 5 HOH A 16 416 17 HOH HOH . E 5 HOH A 17 417 18 HOH HOH . E 5 HOH A 18 418 19 HOH HOH . E 5 HOH A 19 419 20 HOH HOH . E 5 HOH A 20 420 21 HOH HOH . E 5 HOH A 21 421 22 HOH HOH . E 5 HOH A 22 422 23 HOH HOH . E 5 HOH A 23 423 24 HOH HOH . E 5 HOH A 24 424 25 HOH HOH . E 5 HOH A 25 425 26 HOH HOH . E 5 HOH A 26 426 27 HOH HOH . E 5 HOH A 27 427 28 HOH HOH . E 5 HOH A 28 428 29 HOH HOH . E 5 HOH A 29 429 30 HOH HOH . E 5 HOH A 30 430 31 HOH HOH . E 5 HOH A 31 431 32 HOH HOH . E 5 HOH A 32 432 33 HOH HOH . E 5 HOH A 33 433 34 HOH HOH . E 5 HOH A 34 434 35 HOH HOH . E 5 HOH A 35 435 36 HOH HOH . E 5 HOH A 36 436 37 HOH HOH . E 5 HOH A 37 437 39 HOH HOH . E 5 HOH A 38 438 40 HOH HOH . E 5 HOH A 39 439 41 HOH HOH . E 5 HOH A 40 440 42 HOH HOH . E 5 HOH A 41 441 43 HOH HOH . E 5 HOH A 42 442 44 HOH HOH . E 5 HOH A 43 443 45 HOH HOH . E 5 HOH A 44 444 46 HOH HOH . E 5 HOH A 45 445 47 HOH HOH . E 5 HOH A 46 446 48 HOH HOH . E 5 HOH A 47 447 49 HOH HOH . E 5 HOH A 48 448 50 HOH HOH . E 5 HOH A 49 449 52 HOH HOH . E 5 HOH A 50 450 53 HOH HOH . E 5 HOH A 51 451 54 HOH HOH . E 5 HOH A 52 452 55 HOH HOH . E 5 HOH A 53 453 56 HOH HOH . E 5 HOH A 54 454 57 HOH HOH . E 5 HOH A 55 455 58 HOH HOH . E 5 HOH A 56 456 59 HOH HOH . E 5 HOH A 57 457 60 HOH HOH . E 5 HOH A 58 458 61 HOH HOH . E 5 HOH A 59 459 62 HOH HOH . E 5 HOH A 60 460 63 HOH HOH . E 5 HOH A 61 461 64 HOH HOH . E 5 HOH A 62 462 65 HOH HOH . E 5 HOH A 63 463 66 HOH HOH . E 5 HOH A 64 464 67 HOH HOH . E 5 HOH A 65 465 68 HOH HOH . E 5 HOH A 66 466 69 HOH HOH . E 5 HOH A 67 467 70 HOH HOH . E 5 HOH A 68 468 71 HOH HOH . E 5 HOH A 69 469 73 HOH HOH . E 5 HOH A 70 470 74 HOH HOH . E 5 HOH A 71 471 75 HOH HOH . E 5 HOH A 72 472 76 HOH HOH . E 5 HOH A 73 473 77 HOH HOH . E 5 HOH A 74 474 78 HOH HOH . E 5 HOH A 75 475 79 HOH HOH . E 5 HOH A 76 476 80 HOH HOH . E 5 HOH A 77 477 81 HOH HOH . E 5 HOH A 78 478 82 HOH HOH . E 5 HOH A 79 479 83 HOH HOH . E 5 HOH A 80 480 84 HOH HOH . E 5 HOH A 81 481 85 HOH HOH . E 5 HOH A 82 482 86 HOH HOH . E 5 HOH A 83 483 87 HOH HOH . E 5 HOH A 84 484 88 HOH HOH . E 5 HOH A 85 485 89 HOH HOH . E 5 HOH A 86 486 90 HOH HOH . E 5 HOH A 87 487 91 HOH HOH . E 5 HOH A 88 488 92 HOH HOH . E 5 HOH A 89 489 93 HOH HOH . E 5 HOH A 90 490 94 HOH HOH . E 5 HOH A 91 491 95 HOH HOH . E 5 HOH A 92 492 96 HOH HOH . E 5 HOH A 93 493 98 HOH HOH . E 5 HOH A 94 494 99 HOH HOH . E 5 HOH A 95 495 100 HOH HOH . E 5 HOH A 96 496 101 HOH HOH . E 5 HOH A 97 497 102 HOH HOH . E 5 HOH A 98 498 103 HOH HOH . E 5 HOH A 99 499 104 HOH HOH . E 5 HOH A 100 500 105 HOH HOH . E 5 HOH A 101 501 106 HOH HOH . E 5 HOH A 102 502 107 HOH HOH . E 5 HOH A 103 503 108 HOH HOH . E 5 HOH A 104 504 109 HOH HOH . E 5 HOH A 105 505 110 HOH HOH . E 5 HOH A 106 506 111 HOH HOH . E 5 HOH A 107 507 112 HOH HOH . E 5 HOH A 108 508 113 HOH HOH . E 5 HOH A 109 509 114 HOH HOH . E 5 HOH A 110 510 115 HOH HOH . E 5 HOH A 111 511 116 HOH HOH . F 5 HOH B 1 101 97 HOH HOH . F 5 HOH B 2 102 16 HOH HOH . F 5 HOH B 3 103 38 HOH HOH . F 5 HOH B 4 104 51 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol LI _atom_site.label_atom_id LI _atom_site.label_comp_id LI _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -2.001 _atom_site.Cartn_y -9.298 _atom_site.Cartn_z -22.482 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 10.46 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id LI _atom_site.auth_comp_id LI _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 230 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #