data_4K3P
#
_model_server_result.job_id            iImnr5OvcHJzUn2DvizlzQ 
_model_server_result.datetime_utc      '2024-11-13 16:47:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4k3p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":401}' 
#
_entry.id    4K3P 
#
_exptl.entry_id    4K3P 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          114.16 
_cell.angle_gamma         90 
_cell.entry_id            4K3P 
_cell.length_a            79.96 
_cell.length_b            66.68 
_cell.length_c            80.92 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4K3P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
? 3 G N N 
? 3 J N N 
? 3 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C C ACE 1 E ACE -1 1_555 C N GLN 2 E GLN 0 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
metalc ? metalc1 A O GLY 280 A GLY 280 1_555 G CA CA . A CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.95 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4K3P 
_atom_sites.fract_transf_matrix[1][1]    0.012506 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00561 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014997 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013544 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 CA A 1 401 1 CA CA . 
E 4 EDO A 1 402 1 EDO EDO . 
F 3 CA A 1 403 1 CA CA . 
G 3 CA A 1 404 1 CA CA . 
H 5 PG4 B 1 401 1 PG4 PG4 . 
I 6 PEG B 1 402 1 PEG PEG . 
J 3 CA B 1 403 1 CA CA . 
K 6 PEG B 1 404 1 PEG PEG . 
L 7 PGE B 1 405 1 PGE PGE . 
M 3 CA B 1 406 1 CA CA . 
N 8 CL B 1 407 1 CL CL . 
O 9 HOH A 1 501 1 HOH HOH . 
O 9 HOH A 2 502 3 HOH HOH . 
O 9 HOH A 3 503 11 HOH HOH . 
O 9 HOH A 4 504 12 HOH HOH . 
O 9 HOH A 5 505 14 HOH HOH . 
O 9 HOH A 6 506 16 HOH HOH . 
O 9 HOH A 7 507 18 HOH HOH . 
O 9 HOH A 8 508 20 HOH HOH . 
O 9 HOH A 9 509 21 HOH HOH . 
O 9 HOH A 10 510 23 HOH HOH . 
O 9 HOH A 11 511 27 HOH HOH . 
O 9 HOH A 12 512 31 HOH HOH . 
O 9 HOH A 13 513 33 HOH HOH . 
O 9 HOH A 14 514 34 HOH HOH . 
O 9 HOH A 15 515 39 HOH HOH . 
O 9 HOH A 16 516 42 HOH HOH . 
O 9 HOH A 17 517 43 HOH HOH . 
O 9 HOH A 18 518 45 HOH HOH . 
O 9 HOH A 19 519 46 HOH HOH . 
O 9 HOH A 20 520 48 HOH HOH . 
O 9 HOH A 21 521 50 HOH HOH . 
O 9 HOH A 22 522 53 HOH HOH . 
O 9 HOH A 23 523 54 HOH HOH . 
O 9 HOH A 24 524 55 HOH HOH . 
O 9 HOH A 25 525 58 HOH HOH . 
O 9 HOH A 26 526 59 HOH HOH . 
O 9 HOH A 27 527 60 HOH HOH . 
O 9 HOH A 28 528 61 HOH HOH . 
O 9 HOH A 29 529 62 HOH HOH . 
O 9 HOH A 30 530 65 HOH HOH . 
O 9 HOH A 31 531 67 HOH HOH . 
O 9 HOH A 32 532 68 HOH HOH . 
O 9 HOH A 33 533 70 HOH HOH . 
O 9 HOH A 34 534 71 HOH HOH . 
O 9 HOH A 35 535 72 HOH HOH . 
O 9 HOH A 36 536 73 HOH HOH . 
O 9 HOH A 37 537 74 HOH HOH . 
O 9 HOH A 38 538 76 HOH HOH . 
O 9 HOH A 39 539 79 HOH HOH . 
O 9 HOH A 40 540 81 HOH HOH . 
O 9 HOH A 41 541 83 HOH HOH . 
O 9 HOH A 42 542 85 HOH HOH . 
O 9 HOH A 43 543 86 HOH HOH . 
O 9 HOH A 44 544 89 HOH HOH . 
O 9 HOH A 45 545 93 HOH HOH . 
O 9 HOH A 46 546 96 HOH HOH . 
O 9 HOH A 47 547 97 HOH HOH . 
O 9 HOH A 48 548 99 HOH HOH . 
O 9 HOH A 49 549 103 HOH HOH . 
O 9 HOH A 50 550 105 HOH HOH . 
O 9 HOH A 51 551 106 HOH HOH . 
O 9 HOH A 52 552 107 HOH HOH . 
O 9 HOH A 53 553 108 HOH HOH . 
O 9 HOH A 54 554 110 HOH HOH . 
O 9 HOH A 55 555 115 HOH HOH . 
O 9 HOH A 56 556 116 HOH HOH . 
O 9 HOH A 57 557 117 HOH HOH . 
O 9 HOH A 58 558 119 HOH HOH . 
O 9 HOH A 59 559 120 HOH HOH . 
O 9 HOH A 60 560 121 HOH HOH . 
O 9 HOH A 61 561 125 HOH HOH . 
O 9 HOH A 62 562 126 HOH HOH . 
O 9 HOH A 63 563 127 HOH HOH . 
O 9 HOH A 64 564 130 HOH HOH . 
O 9 HOH A 65 565 134 HOH HOH . 
O 9 HOH A 66 566 135 HOH HOH . 
O 9 HOH A 67 567 137 HOH HOH . 
O 9 HOH A 68 568 139 HOH HOH . 
O 9 HOH A 69 569 142 HOH HOH . 
O 9 HOH A 70 570 143 HOH HOH . 
O 9 HOH A 71 571 144 HOH HOH . 
O 9 HOH A 72 572 145 HOH HOH . 
P 9 HOH B 1 501 2 HOH HOH . 
P 9 HOH B 2 502 4 HOH HOH . 
P 9 HOH B 3 503 5 HOH HOH . 
P 9 HOH B 4 504 6 HOH HOH . 
P 9 HOH B 5 505 7 HOH HOH . 
P 9 HOH B 6 506 8 HOH HOH . 
P 9 HOH B 7 507 9 HOH HOH . 
P 9 HOH B 8 508 10 HOH HOH . 
P 9 HOH B 9 509 13 HOH HOH . 
P 9 HOH B 10 510 15 HOH HOH . 
P 9 HOH B 11 511 17 HOH HOH . 
P 9 HOH B 12 512 19 HOH HOH . 
P 9 HOH B 13 513 22 HOH HOH . 
P 9 HOH B 14 514 24 HOH HOH . 
P 9 HOH B 15 515 25 HOH HOH . 
P 9 HOH B 16 516 26 HOH HOH . 
P 9 HOH B 17 517 28 HOH HOH . 
P 9 HOH B 18 518 29 HOH HOH . 
P 9 HOH B 19 519 30 HOH HOH . 
P 9 HOH B 20 520 32 HOH HOH . 
P 9 HOH B 21 521 35 HOH HOH . 
P 9 HOH B 22 522 36 HOH HOH . 
P 9 HOH B 23 523 37 HOH HOH . 
P 9 HOH B 24 524 38 HOH HOH . 
P 9 HOH B 25 525 40 HOH HOH . 
P 9 HOH B 26 526 41 HOH HOH . 
P 9 HOH B 27 527 44 HOH HOH . 
P 9 HOH B 28 528 47 HOH HOH . 
P 9 HOH B 29 529 49 HOH HOH . 
P 9 HOH B 30 530 51 HOH HOH . 
P 9 HOH B 31 531 52 HOH HOH . 
P 9 HOH B 32 532 56 HOH HOH . 
P 9 HOH B 33 533 57 HOH HOH . 
P 9 HOH B 34 534 63 HOH HOH . 
P 9 HOH B 35 535 64 HOH HOH . 
P 9 HOH B 36 536 66 HOH HOH . 
P 9 HOH B 37 537 75 HOH HOH . 
P 9 HOH B 38 538 77 HOH HOH . 
P 9 HOH B 39 539 80 HOH HOH . 
P 9 HOH B 40 540 82 HOH HOH . 
P 9 HOH B 41 541 84 HOH HOH . 
P 9 HOH B 42 542 87 HOH HOH . 
P 9 HOH B 43 543 88 HOH HOH . 
P 9 HOH B 44 544 90 HOH HOH . 
P 9 HOH B 45 545 91 HOH HOH . 
P 9 HOH B 46 546 92 HOH HOH . 
P 9 HOH B 47 547 95 HOH HOH . 
P 9 HOH B 48 548 98 HOH HOH . 
P 9 HOH B 49 549 100 HOH HOH . 
P 9 HOH B 50 550 101 HOH HOH . 
P 9 HOH B 51 551 102 HOH HOH . 
P 9 HOH B 52 552 104 HOH HOH . 
P 9 HOH B 53 553 109 HOH HOH . 
P 9 HOH B 54 554 112 HOH HOH . 
P 9 HOH B 55 555 113 HOH HOH . 
P 9 HOH B 56 556 114 HOH HOH . 
P 9 HOH B 57 557 118 HOH HOH . 
P 9 HOH B 58 558 122 HOH HOH . 
P 9 HOH B 59 559 123 HOH HOH . 
P 9 HOH B 60 560 124 HOH HOH . 
P 9 HOH B 61 561 128 HOH HOH . 
P 9 HOH B 62 562 129 HOH HOH . 
P 9 HOH B 63 563 131 HOH HOH . 
P 9 HOH B 64 564 132 HOH HOH . 
P 9 HOH B 65 565 133 HOH HOH . 
P 9 HOH B 66 566 136 HOH HOH . 
P 9 HOH B 67 567 138 HOH HOH . 
P 9 HOH B 68 568 140 HOH HOH . 
P 9 HOH B 69 569 141 HOH HOH . 
P 9 HOH B 70 570 146 HOH HOH . 
P 9 HOH B 71 571 147 HOH HOH . 
P 9 HOH B 72 572 148 HOH HOH . 
P 9 HOH B 73 573 149 HOH HOH . 
Q 9 HOH E 1 101 69 HOH HOH . 
Q 9 HOH E 2 102 94 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               14.811 
_atom_site.Cartn_y               10.465 
_atom_site.Cartn_z               -7.487 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        64.25 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           401 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#