data_4K43 # _model_server_result.job_id f4T-zRDbqoB6jdZkNmgW-A _model_server_result.datetime_utc '2024-11-16 00:31:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4k43 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 4K43 # _exptl.entry_id 4K43 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 531.681 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{(1E,4R,5R,7E,9S,10S,11S)-4,10-dimethoxy-11-[(2S,4S,5S)-2-(4-methoxyphenyl)-5-methyl-1,3-dioxan-4-yl]-5,9-dimethyl-6-oxododeca-1,7-dien-1-yl}-N-methylformamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.7 _cell.angle_gamma 90 _cell.entry_id 4K43 _cell.length_a 54.578 _cell.length_b 70.349 _cell.length_c 107.673 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4K43 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C CA CA . A CA 401 1_555 D O2B ADP . A ADP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.908 ? metalc ? metalc2 C CA CA . A CA 401 1_555 I O HOH . A HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.709 ? metalc ? metalc3 C CA CA . A CA 401 1_555 I O HOH . A HOH 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.474 ? metalc ? metalc4 F CA CA . B CA 401 1_555 G O2B ADP . B ADP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? # _chem_comp.formula 'C30 H45 N O7' _chem_comp.formula_weight 531.681 _chem_comp.id 1PO _chem_comp.mon_nstd_flag . _chem_comp.name N-{(1E,4R,5R,7E,9S,10S,11S)-4,10-dimethoxy-11-[(2S,4S,5S)-2-(4-methoxyphenyl)-5-methyl-1,3-dioxan-4-yl]-5,9-dimethyl-6-oxododeca-1,7-dien-1-yl}-N-methylformamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O28 C27 1PO sing 1 n n O28 C29 1PO sing 2 n n C27 C25 1PO sing 3 n n C33 C32 1PO doub 4 n y C33 C34 1PO sing 5 n y C23 C22 1PO sing 6 n n C25 C26 1PO sing 7 n n C25 C24 1PO sing 8 n n C32 C31 1PO sing 9 n y O37 C34 1PO sing 10 n n O37 C38 1PO sing 11 n n C34 C35 1PO doub 12 n y C31 C29 1PO sing 13 n n C31 C36 1PO doub 14 n y C29 O30 1PO sing 15 n n C35 C36 1PO sing 16 n y O01 C02 1PO doub 17 n n O30 C24 1PO sing 18 n n C24 C22 1PO sing 19 n n C22 C19 1PO sing 20 n n C02 N03 1PO sing 21 n n C19 C17 1PO sing 22 n n C19 O20 1PO sing 23 n n C12 C11 1PO sing 24 n n C17 C16 1PO sing 25 n n C17 C18 1PO sing 26 n n N03 C04 1PO sing 27 n n N03 C05 1PO sing 28 n n C15 C16 1PO doub 29 e n C15 C13 1PO sing 30 n n C05 C06 1PO doub 31 e n C13 C11 1PO sing 32 n n C13 O14 1PO doub 33 n n C11 C08 1PO sing 34 n n O20 C21 1PO sing 35 n n C06 C07 1PO sing 36 n n C07 C08 1PO sing 37 n n C08 O09 1PO sing 38 n n O09 C10 1PO sing 39 n n C02 H1 1PO sing 40 n n C04 H2 1PO sing 41 n n C04 H3 1PO sing 42 n n C04 H4 1PO sing 43 n n C05 H5 1PO sing 44 n n C06 H6 1PO sing 45 n n C07 H7 1PO sing 46 n n C07 H8 1PO sing 47 n n C08 H9 1PO sing 48 n n C10 H10 1PO sing 49 n n C10 H11 1PO sing 50 n n C10 H12 1PO sing 51 n n C11 H13 1PO sing 52 n n C12 H14 1PO sing 53 n n C12 H15 1PO sing 54 n n C12 H16 1PO sing 55 n n C15 H17 1PO sing 56 n n C16 H18 1PO sing 57 n n C17 H19 1PO sing 58 n n C18 H20 1PO sing 59 n n C18 H21 1PO sing 60 n n C18 H22 1PO sing 61 n n C19 H23 1PO sing 62 n n C21 H24 1PO sing 63 n n C21 H25 1PO sing 64 n n C21 H26 1PO sing 65 n n C22 H27 1PO sing 66 n n C23 H28 1PO sing 67 n n C23 H29 1PO sing 68 n n C23 H30 1PO sing 69 n n C24 H31 1PO sing 70 n n C25 H32 1PO sing 71 n n C26 H33 1PO sing 72 n n C26 H34 1PO sing 73 n n C26 H35 1PO sing 74 n n C27 H36 1PO sing 75 n n C27 H37 1PO sing 76 n n C29 H38 1PO sing 77 n n C32 H39 1PO sing 78 n n C33 H40 1PO sing 79 n n C35 H41 1PO sing 80 n n C36 H42 1PO sing 81 n n C38 H43 1PO sing 82 n n C38 H44 1PO sing 83 n n C38 H45 1PO sing 84 n n # _atom_sites.entry_id 4K43 _atom_sites.fract_transf_matrix[1][1] 0.018322 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004807 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014215 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009602 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 401 376 CA CA . D 3 ADP A 1 402 380 ADP ADP . E 4 1PO A 1 403 381 1PO 1PO . F 2 CA B 1 401 376 CA CA . G 3 ADP B 1 402 380 ADP ADP . H 4 1PO B 1 403 381 1PO 1PO . I 5 HOH A 1 501 2 HOH HOH . I 5 HOH A 2 502 3 HOH HOH . I 5 HOH A 3 503 6 HOH HOH . I 5 HOH A 4 504 7 HOH HOH . I 5 HOH A 5 505 9 HOH HOH . I 5 HOH A 6 506 10 HOH HOH . I 5 HOH A 7 507 11 HOH HOH . I 5 HOH A 8 508 15 HOH HOH . I 5 HOH A 9 509 16 HOH HOH . I 5 HOH A 10 510 18 HOH HOH . I 5 HOH A 11 511 20 HOH HOH . I 5 HOH A 12 512 21 HOH HOH . I 5 HOH A 13 513 22 HOH HOH . I 5 HOH A 14 514 24 HOH HOH . I 5 HOH A 15 515 26 HOH HOH . I 5 HOH A 16 516 29 HOH HOH . I 5 HOH A 17 517 30 HOH HOH . I 5 HOH A 18 518 31 HOH HOH . I 5 HOH A 19 519 32 HOH HOH . I 5 HOH A 20 520 33 HOH HOH . I 5 HOH A 21 521 35 HOH HOH . I 5 HOH A 22 522 36 HOH HOH . I 5 HOH A 23 523 38 HOH HOH . I 5 HOH A 24 524 39 HOH HOH . I 5 HOH A 25 525 40 HOH HOH . I 5 HOH A 26 526 41 HOH HOH . I 5 HOH A 27 527 45 HOH HOH . I 5 HOH A 28 528 46 HOH HOH . I 5 HOH A 29 529 47 HOH HOH . I 5 HOH A 30 530 48 HOH HOH . I 5 HOH A 31 531 49 HOH HOH . I 5 HOH A 32 532 50 HOH HOH . I 5 HOH A 33 533 52 HOH HOH . I 5 HOH A 34 534 54 HOH HOH . I 5 HOH A 35 535 55 HOH HOH . I 5 HOH A 36 536 57 HOH HOH . I 5 HOH A 37 537 61 HOH HOH . I 5 HOH A 38 538 64 HOH HOH . I 5 HOH A 39 539 65 HOH HOH . I 5 HOH A 40 540 68 HOH HOH . I 5 HOH A 41 541 70 HOH HOH . I 5 HOH A 42 542 75 HOH HOH . I 5 HOH A 43 543 77 HOH HOH . I 5 HOH A 44 544 81 HOH HOH . J 5 HOH B 1 501 1 HOH HOH . J 5 HOH B 2 502 4 HOH HOH . J 5 HOH B 3 503 5 HOH HOH . J 5 HOH B 4 504 8 HOH HOH . J 5 HOH B 5 505 12 HOH HOH . J 5 HOH B 6 506 13 HOH HOH . J 5 HOH B 7 507 14 HOH HOH . J 5 HOH B 8 508 17 HOH HOH . J 5 HOH B 9 509 19 HOH HOH . J 5 HOH B 10 510 23 HOH HOH . J 5 HOH B 11 511 25 HOH HOH . J 5 HOH B 12 512 27 HOH HOH . J 5 HOH B 13 513 28 HOH HOH . J 5 HOH B 14 514 34 HOH HOH . J 5 HOH B 15 515 37 HOH HOH . J 5 HOH B 16 516 42 HOH HOH . J 5 HOH B 17 517 43 HOH HOH . J 5 HOH B 18 518 44 HOH HOH . J 5 HOH B 19 519 51 HOH HOH . J 5 HOH B 20 520 53 HOH HOH . J 5 HOH B 21 521 56 HOH HOH . J 5 HOH B 22 522 58 HOH HOH . J 5 HOH B 23 523 59 HOH HOH . J 5 HOH B 24 524 60 HOH HOH . J 5 HOH B 25 525 62 HOH HOH . J 5 HOH B 26 526 63 HOH HOH . J 5 HOH B 27 527 66 HOH HOH . J 5 HOH B 28 528 67 HOH HOH . J 5 HOH B 29 529 69 HOH HOH . J 5 HOH B 30 530 71 HOH HOH . J 5 HOH B 31 531 72 HOH HOH . J 5 HOH B 32 532 73 HOH HOH . J 5 HOH B 33 533 74 HOH HOH . J 5 HOH B 34 534 76 HOH HOH . J 5 HOH B 35 535 78 HOH HOH . J 5 HOH B 36 536 79 HOH HOH . J 5 HOH B 37 537 80 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 1PO . . . E 4 -30.898 -19.053 -4.231 1 15.3 ? O01 1PO 403 A 1 HETATM 2 C C02 1PO . . . E 4 -32.003 -18.806 -3.754 1 13.38 ? C02 1PO 403 A 1 HETATM 3 N N03 1PO . . . E 4 -32.148 -17.892 -2.713 1 14.85 ? N03 1PO 403 A 1 HETATM 4 C C04 1PO . . . E 4 -30.899 -17.254 -2.237 1 14.3 ? C04 1PO 403 A 1 HETATM 5 C C05 1PO . . . E 4 -33.41 -17.576 -2.128 1 17.45 ? C05 1PO 403 A 1 HETATM 6 C C06 1PO . . . E 4 -33.571 -16.62 -1.186 1 15.98 ? C06 1PO 403 A 1 HETATM 7 C C07 1PO . . . E 4 -34.862 -16.322 -0.488 1 14.21 ? C07 1PO 403 A 1 HETATM 8 C C08 1PO . . . E 4 -35.283 -14.818 -0.482 1 13.3 ? C08 1PO 403 A 1 HETATM 9 O O09 1PO . . . E 4 -34.323 -14.175 0.316 1 13.75 ? O09 1PO 403 A 1 HETATM 10 C C10 1PO . . . E 4 -34.814 -13.621 1.505 1 15.53 ? C10 1PO 403 A 1 HETATM 11 C C11 1PO . . . E 4 -35.225 -14.165 -1.92 1 13.97 ? C11 1PO 403 A 1 HETATM 12 C C12 1PO . . . E 4 -36.381 -14.722 -2.757 1 14.51 ? C12 1PO 403 A 1 HETATM 13 C C13 1PO . . . E 4 -35.238 -12.627 -1.943 1 13.75 ? C13 1PO 403 A 1 HETATM 14 O O14 1PO . . . E 4 -36.18 -12.027 -1.452 1 14.2 ? O14 1PO 403 A 1 HETATM 15 C C15 1PO . . . E 4 -34.11 -11.786 -2.553 1 12.15 ? C15 1PO 403 A 1 HETATM 16 C C16 1PO . . . E 4 -34.25 -10.249 -2.349 1 12.06 ? C16 1PO 403 A 1 HETATM 17 C C17 1PO . . . E 4 -33.026 -9.387 -2.752 1 12.95 ? C17 1PO 403 A 1 HETATM 18 C C18 1PO . . . E 4 -31.941 -9.478 -1.686 1 12.72 ? C18 1PO 403 A 1 HETATM 19 C C19 1PO . . . E 4 -33.383 -7.862 -2.965 1 12.42 ? C19 1PO 403 A 1 HETATM 20 O O20 1PO . . . E 4 -33.727 -7.369 -1.697 1 10.92 ? O20 1PO 403 A 1 HETATM 21 C C21 1PO . . . E 4 -32.895 -6.345 -1.22 1 11.87 ? C21 1PO 403 A 1 HETATM 22 C C22 1PO . . . E 4 -34.598 -7.538 -3.898 1 12.55 ? C22 1PO 403 A 1 HETATM 23 C C23 1PO . . . E 4 -34.438 -8.118 -5.296 1 12.28 ? C23 1PO 403 A 1 HETATM 24 C C24 1PO . . . E 4 -34.857 -6 -4.013 1 13.98 ? C24 1PO 403 A 1 HETATM 25 C C25 1PO . . . E 4 -35.802 -5.726 -5.198 1 13.52 ? C25 1PO 403 A 1 HETATM 26 C C26 1PO . . . E 4 -37.206 -6.285 -4.959 1 12.1 ? C26 1PO 403 A 1 HETATM 27 C C27 1PO . . . E 4 -35.831 -4.197 -5.384 1 14.23 ? C27 1PO 403 A 1 HETATM 28 O O28 1PO . . . E 4 -34.515 -3.666 -5.461 1 15.5 ? O28 1PO 403 A 1 HETATM 29 C C29 1PO . . . E 4 -33.701 -3.917 -4.335 1 15.77 ? C29 1PO 403 A 1 HETATM 30 O O30 1PO . . . E 4 -33.631 -5.322 -4.213 1 14.81 ? O30 1PO 403 A 1 HETATM 31 C C31 1PO . . . E 4 -32.305 -3.26 -4.551 1 17.05 ? C31 1PO 403 A 1 HETATM 32 C C32 1PO . . . E 4 -31.253 -3.957 -5.174 1 17.2 ? C32 1PO 403 A 1 HETATM 33 C C33 1PO . . . E 4 -29.982 -3.413 -5.379 1 19.2 ? C33 1PO 403 A 1 HETATM 34 C C34 1PO . . . E 4 -29.692 -2.117 -4.96 1 20.73 ? C34 1PO 403 A 1 HETATM 35 C C35 1PO . . . E 4 -30.71 -1.397 -4.332 1 19.82 ? C35 1PO 403 A 1 HETATM 36 C C36 1PO . . . E 4 -31.979 -1.969 -4.137 1 18.48 ? C36 1PO 403 A 1 HETATM 37 O O37 1PO . . . E 4 -28.446 -1.552 -5.145 1 22.53 ? O37 1PO 403 A 1 HETATM 38 C C38 1PO . . . E 4 -27.36 -2.18 -4.486 1 22.39 ? C38 1PO 403 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 38 #