data_4K5F # _model_server_result.job_id fPF9BdQ3j7Ka9V47mIw9Qg _model_server_result.datetime_utc '2024-11-04 22:55:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4k5f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":804}' # _entry.id 4K5F # _exptl.entry_id 4K5F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4K5F _cell.length_a 51.588 _cell.length_b 110.742 _cell.length_c 164.353 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4K5F _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 30 A CYS 326 1_555 G ZN ZN . A ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc2 A SG CYS 35 A CYS 331 1_555 G ZN ZN . A ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc3 A SG CYS 119 A CYS 415 1_555 C FE HEM . A HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc4 G ZN ZN . A ZN 805 1_555 B SG CYS 30 B CYS 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc5 G ZN ZN . A ZN 805 1_555 B SG CYS 35 B CYS 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc6 B SG CYS 119 B CYS 415 1_555 H FE HEM . B HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 4K5F _atom_sites.fract_transf_matrix[1][1] 0.019384 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00903 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006084 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 801 750 HEM HEM . D 3 H4B A 1 802 760 H4B BH4 . E 4 ACT A 1 803 860 ACT ACT . F 5 Q14 A 1 804 800 Q14 Q14 . G 6 ZN A 1 805 900 ZN ZN . H 2 HEM B 1 801 750 HEM HEM . I 3 H4B B 1 802 760 H4B BH4 . J 5 Q14 B 1 803 800 Q14 Q14 . K 4 ACT B 1 804 860 ACT ACT . L 7 HOH A 1 901 4 HOH HOH . L 7 HOH A 2 902 5 HOH HOH . L 7 HOH A 3 903 8 HOH HOH . L 7 HOH A 4 904 10 HOH HOH . L 7 HOH A 5 905 16 HOH HOH . L 7 HOH A 6 906 18 HOH HOH . L 7 HOH A 7 907 19 HOH HOH . L 7 HOH A 8 908 22 HOH HOH . L 7 HOH A 9 909 23 HOH HOH . L 7 HOH A 10 910 34 HOH HOH . L 7 HOH A 11 911 37 HOH HOH . L 7 HOH A 12 912 38 HOH HOH . L 7 HOH A 13 913 39 HOH HOH . L 7 HOH A 14 914 41 HOH HOH . L 7 HOH A 15 915 42 HOH HOH . L 7 HOH A 16 916 44 HOH HOH . L 7 HOH A 17 917 46 HOH HOH . L 7 HOH A 18 918 50 HOH HOH . L 7 HOH A 19 919 55 HOH HOH . L 7 HOH A 20 920 57 HOH HOH . L 7 HOH A 21 921 60 HOH HOH . L 7 HOH A 22 922 62 HOH HOH . L 7 HOH A 23 923 64 HOH HOH . L 7 HOH A 24 924 65 HOH HOH . L 7 HOH A 25 925 66 HOH HOH . L 7 HOH A 26 926 67 HOH HOH . L 7 HOH A 27 927 68 HOH HOH . L 7 HOH A 28 928 69 HOH HOH . L 7 HOH A 29 929 70 HOH HOH . L 7 HOH A 30 930 74 HOH HOH . L 7 HOH A 31 931 76 HOH HOH . L 7 HOH A 32 932 85 HOH HOH . L 7 HOH A 33 933 88 HOH HOH . L 7 HOH A 34 934 90 HOH HOH . L 7 HOH A 35 935 93 HOH HOH . L 7 HOH A 36 936 94 HOH HOH . L 7 HOH A 37 937 96 HOH HOH . L 7 HOH A 38 938 97 HOH HOH . L 7 HOH A 39 939 98 HOH HOH . L 7 HOH A 40 940 99 HOH HOH . L 7 HOH A 41 941 101 HOH HOH . L 7 HOH A 42 942 103 HOH HOH . L 7 HOH A 43 943 105 HOH HOH . L 7 HOH A 44 944 106 HOH HOH . L 7 HOH A 45 945 108 HOH HOH . L 7 HOH A 46 946 110 HOH HOH . L 7 HOH A 47 947 111 HOH HOH . L 7 HOH A 48 948 112 HOH HOH . L 7 HOH A 49 949 114 HOH HOH . L 7 HOH A 50 950 119 HOH HOH . L 7 HOH A 51 951 122 HOH HOH . L 7 HOH A 52 952 127 HOH HOH . L 7 HOH A 53 953 130 HOH HOH . L 7 HOH A 54 954 131 HOH HOH . L 7 HOH A 55 955 132 HOH HOH . L 7 HOH A 56 956 133 HOH HOH . L 7 HOH A 57 957 134 HOH HOH . L 7 HOH A 58 958 135 HOH HOH . L 7 HOH A 59 959 136 HOH HOH . L 7 HOH A 60 960 137 HOH HOH . M 7 HOH B 1 901 1 HOH HOH . M 7 HOH B 2 902 2 HOH HOH . M 7 HOH B 3 903 3 HOH HOH . M 7 HOH B 4 904 6 HOH HOH . M 7 HOH B 5 905 7 HOH HOH . M 7 HOH B 6 906 9 HOH HOH . M 7 HOH B 7 907 11 HOH HOH . M 7 HOH B 8 908 12 HOH HOH . M 7 HOH B 9 909 13 HOH HOH . M 7 HOH B 10 910 14 HOH HOH . M 7 HOH B 11 911 15 HOH HOH . M 7 HOH B 12 912 17 HOH HOH . M 7 HOH B 13 913 20 HOH HOH . M 7 HOH B 14 914 21 HOH HOH . M 7 HOH B 15 915 24 HOH HOH . M 7 HOH B 16 916 25 HOH HOH . M 7 HOH B 17 917 26 HOH HOH . M 7 HOH B 18 918 27 HOH HOH . M 7 HOH B 19 919 28 HOH HOH . M 7 HOH B 20 920 29 HOH HOH . M 7 HOH B 21 921 30 HOH HOH . M 7 HOH B 22 922 31 HOH HOH . M 7 HOH B 23 923 32 HOH HOH . M 7 HOH B 24 924 33 HOH HOH . M 7 HOH B 25 925 35 HOH HOH . M 7 HOH B 26 926 36 HOH HOH . M 7 HOH B 27 927 40 HOH HOH . M 7 HOH B 28 928 43 HOH HOH . M 7 HOH B 29 929 45 HOH HOH . M 7 HOH B 30 930 47 HOH HOH . M 7 HOH B 31 931 48 HOH HOH . M 7 HOH B 32 932 49 HOH HOH . M 7 HOH B 33 933 51 HOH HOH . M 7 HOH B 34 934 52 HOH HOH . M 7 HOH B 35 935 53 HOH HOH . M 7 HOH B 36 936 54 HOH HOH . M 7 HOH B 37 937 56 HOH HOH . M 7 HOH B 38 938 58 HOH HOH . M 7 HOH B 39 939 59 HOH HOH . M 7 HOH B 40 940 61 HOH HOH . M 7 HOH B 41 941 63 HOH HOH . M 7 HOH B 42 942 71 HOH HOH . M 7 HOH B 43 943 72 HOH HOH . M 7 HOH B 44 944 73 HOH HOH . M 7 HOH B 45 945 75 HOH HOH . M 7 HOH B 46 946 77 HOH HOH . M 7 HOH B 47 947 78 HOH HOH . M 7 HOH B 48 948 79 HOH HOH . M 7 HOH B 49 949 80 HOH HOH . M 7 HOH B 50 950 81 HOH HOH . M 7 HOH B 51 951 82 HOH HOH . M 7 HOH B 52 952 83 HOH HOH . M 7 HOH B 53 953 84 HOH HOH . M 7 HOH B 54 954 86 HOH HOH . M 7 HOH B 55 955 87 HOH HOH . M 7 HOH B 56 956 89 HOH HOH . M 7 HOH B 57 957 91 HOH HOH . M 7 HOH B 58 958 92 HOH HOH . M 7 HOH B 59 959 95 HOH HOH . M 7 HOH B 60 960 100 HOH HOH . M 7 HOH B 61 961 102 HOH HOH . M 7 HOH B 62 962 104 HOH HOH . M 7 HOH B 63 963 107 HOH HOH . M 7 HOH B 64 964 109 HOH HOH . M 7 HOH B 65 965 113 HOH HOH . M 7 HOH B 66 966 115 HOH HOH . M 7 HOH B 67 967 116 HOH HOH . M 7 HOH B 68 968 117 HOH HOH . M 7 HOH B 69 969 118 HOH HOH . M 7 HOH B 70 970 120 HOH HOH . M 7 HOH B 71 971 121 HOH HOH . M 7 HOH B 72 972 123 HOH HOH . M 7 HOH B 73 973 124 HOH HOH . M 7 HOH B 74 974 125 HOH HOH . M 7 HOH B 75 975 126 HOH HOH . M 7 HOH B 76 976 128 HOH HOH . M 7 HOH B 77 977 129 HOH HOH . M 7 HOH B 78 978 138 HOH HOH . M 7 HOH B 79 979 139 HOH HOH . M 7 HOH B 80 980 140 HOH HOH . M 7 HOH B 81 981 141 HOH HOH . M 7 HOH B 82 982 142 HOH HOH . M 7 HOH B 83 983 143 HOH HOH . M 7 HOH B 84 984 144 HOH HOH . M 7 HOH B 85 985 145 HOH HOH . M 7 HOH B 86 986 146 HOH HOH . M 7 HOH B 87 987 147 HOH HOH . M 7 HOH B 88 988 148 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . K 4 2.486 -4.903 56.294 1 65.57 ? C ACT 804 B 1 HETATM 2 O O ACT . . . K 4 3.653 -5.036 56.712 1 67.16 ? O ACT 804 B 1 HETATM 3 O OXT ACT . . . K 4 1.534 -5.345 56.959 1 73.36 ? OXT ACT 804 B 1 HETATM 4 C CH3 ACT . . . K 4 2.213 -4.191 54.997 1 65.82 ? CH3 ACT 804 B 1 # _model_server_stats.io_time_ms 85 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #