data_4K6I # _model_server_result.job_id 97LROVDWaiJ9Hti29KQ1jQ _model_server_result.datetime_utc '2025-07-26 23:55:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4k6i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":500}' # _entry.id 4K6I # _exptl.entry_id 4K6I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 348.478 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-[1-(3,5,5,8,8-pentamethyl-5,6,7,8-tetrahydronaphthalen-2-yl)ethenyl]benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4K6I _cell.length_a 68.15 _cell.length_b 68.15 _cell.length_c 106.59 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4K6I _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H28 O2' _chem_comp.formula_weight 348.478 _chem_comp.id 9RA _chem_comp.mon_nstd_flag . _chem_comp.name '4-[1-(3,5,5,8,8-pentamethyl-5,6,7,8-tetrahydronaphthalen-2-yl)ethenyl]benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C51 O53 9RA doub 1 n n C11 C51 9RA sing 2 n n C51 O52 9RA sing 3 n n O52 HO52 9RA sing 4 n n C12 C11 9RA doub 5 n y C10 C11 9RA sing 6 n y C9 C10 9RA doub 7 n y C10 H10 9RA sing 8 n n C13 C12 9RA sing 9 n y C12 H12 9RA sing 10 n n C14 C13 9RA doub 11 n y C13 H13 9RA sing 12 n n C47 C14 9RA sing 13 n n C14 C9 9RA sing 14 n y C9 H9 9RA sing 15 n n C48 C47 9RA doub 16 n n C4 C47 9RA sing 17 n n C48 H48 9RA sing 18 n n C48 H48A 9RA sing 19 n n C5 C4 9RA doub 20 n y C4 C3 9RA sing 21 n y C2 C3 9RA doub 22 n y C3 C43 9RA sing 23 n n C43 H43 9RA sing 24 n n C43 H43A 9RA sing 25 n n C43 H43B 9RA sing 26 n n C1 C2 9RA sing 27 n y C2 H2 9RA sing 28 n n C6 C5 9RA sing 29 n y C5 H5 9RA sing 30 n n C19 C6 9RA sing 31 n n C6 C1 9RA doub 32 n y C31 C19 9RA sing 33 n n C20 C19 9RA sing 34 n n C19 C27 9RA sing 35 n n C27 H27 9RA sing 36 n n C27 H27A 9RA sing 37 n n C27 H27B 9RA sing 38 n n C31 H31 9RA sing 39 n n C31 H31A 9RA sing 40 n n C31 H31B 9RA sing 41 n n C20 C21 9RA sing 42 n n C20 H20 9RA sing 43 n n C20 H20A 9RA sing 44 n n C22 C21 9RA sing 45 n n C21 H21 9RA sing 46 n n C21 H21A 9RA sing 47 n n C39 C22 9RA sing 48 n n C22 C1 9RA sing 49 n n C22 C35 9RA sing 50 n n C39 H39 9RA sing 51 n n C39 H39A 9RA sing 52 n n C39 H39B 9RA sing 53 n n C35 H35 9RA sing 54 n n C35 H35A 9RA sing 55 n n C35 H35B 9RA sing 56 n n # _atom_sites.entry_id 4K6I _atom_sites.fract_transf_matrix[1][1] 0.014674 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014674 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009382 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 9RA A 1 500 500 9RA TAR . D 4 HOH A 1 601 1 HOH WAT . D 4 HOH A 2 602 2 HOH WAT . D 4 HOH A 3 603 3 HOH WAT . D 4 HOH A 4 604 4 HOH WAT . D 4 HOH A 5 605 5 HOH WAT . D 4 HOH A 6 606 6 HOH WAT . D 4 HOH A 7 607 7 HOH WAT . D 4 HOH A 8 608 8 HOH WAT . D 4 HOH A 9 609 9 HOH WAT . D 4 HOH A 10 610 10 HOH WAT . D 4 HOH A 11 611 11 HOH WAT . D 4 HOH A 12 612 12 HOH WAT . D 4 HOH A 13 613 13 HOH WAT . D 4 HOH A 14 614 14 HOH WAT . D 4 HOH A 15 615 15 HOH WAT . D 4 HOH A 16 616 16 HOH WAT . D 4 HOH A 17 617 17 HOH WAT . D 4 HOH A 18 618 18 HOH WAT . D 4 HOH A 19 619 19 HOH WAT . D 4 HOH A 20 620 20 HOH WAT . D 4 HOH A 21 621 21 HOH WAT . D 4 HOH A 22 622 22 HOH WAT . D 4 HOH A 23 623 23 HOH WAT . D 4 HOH A 24 624 24 HOH WAT . D 4 HOH A 25 625 25 HOH WAT . D 4 HOH A 26 626 26 HOH WAT . D 4 HOH A 27 627 27 HOH WAT . D 4 HOH A 28 628 28 HOH WAT . D 4 HOH A 29 629 29 HOH WAT . D 4 HOH A 30 630 30 HOH WAT . D 4 HOH A 31 631 31 HOH WAT . D 4 HOH A 32 632 32 HOH WAT . D 4 HOH A 33 633 33 HOH WAT . D 4 HOH A 34 634 34 HOH WAT . D 4 HOH A 35 635 35 HOH WAT . D 4 HOH A 36 636 36 HOH WAT . D 4 HOH A 37 637 37 HOH WAT . D 4 HOH A 38 638 38 HOH WAT . D 4 HOH A 39 639 39 HOH WAT . D 4 HOH A 40 640 40 HOH WAT . D 4 HOH A 41 641 41 HOH WAT . D 4 HOH A 42 642 42 HOH WAT . D 4 HOH A 43 643 43 HOH WAT . D 4 HOH A 44 644 44 HOH WAT . D 4 HOH A 45 645 45 HOH WAT . D 4 HOH A 46 646 46 HOH WAT . D 4 HOH A 47 647 47 HOH WAT . D 4 HOH A 48 648 48 HOH WAT . D 4 HOH A 49 649 49 HOH WAT . D 4 HOH A 50 650 50 HOH WAT . D 4 HOH A 51 651 51 HOH WAT . D 4 HOH A 52 652 52 HOH WAT . D 4 HOH A 53 653 53 HOH WAT . D 4 HOH A 54 654 54 HOH WAT . D 4 HOH A 55 655 55 HOH WAT . D 4 HOH A 56 656 56 HOH WAT . D 4 HOH A 57 657 57 HOH WAT . D 4 HOH A 58 658 58 HOH WAT . D 4 HOH A 59 659 59 HOH WAT . D 4 HOH A 60 660 60 HOH WAT . D 4 HOH A 61 661 61 HOH WAT . D 4 HOH A 62 662 62 HOH WAT . D 4 HOH A 63 663 63 HOH WAT . D 4 HOH A 64 664 64 HOH WAT . D 4 HOH A 65 665 65 HOH WAT . D 4 HOH A 66 666 66 HOH WAT . D 4 HOH A 67 667 67 HOH WAT . D 4 HOH A 68 668 68 HOH WAT . D 4 HOH A 69 669 69 HOH WAT . D 4 HOH A 70 670 70 HOH TIP . D 4 HOH A 71 671 71 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O53 9RA . . . C 3 -9.62 18.969 -2.436 1 32.82 ? O53 9RA 500 A 1 HETATM 2 C C51 9RA . . . C 3 -8.757 19.673 -3.005 1 33.29 ? C51 9RA 500 A 1 HETATM 3 O O52 9RA . . . C 3 -9.02 20.553 -3.851 1 33.71 ? O52 9RA 500 A 1 HETATM 4 C C11 9RA . . . C 3 -7.281 19.426 -2.673 1 32.25 ? C11 9RA 500 A 1 HETATM 5 C C10 9RA . . . C 3 -6.302 19.711 -3.619 1 33.26 ? C10 9RA 500 A 1 HETATM 6 C C12 9RA . . . C 3 -6.911 18.843 -1.465 1 27.86 ? C12 9RA 500 A 1 HETATM 7 C C13 9RA . . . C 3 -5.579 18.538 -1.215 1 29.08 ? C13 9RA 500 A 1 HETATM 8 C C14 9RA . . . C 3 -4.595 18.809 -2.165 1 27.15 ? C14 9RA 500 A 1 HETATM 9 C C9 9RA . . . C 3 -4.969 19.403 -3.366 1 31.32 ? C9 9RA 500 A 1 HETATM 10 C C47 9RA . . . C 3 -3.274 18.437 -1.939 1 26.87 ? C47 9RA 500 A 1 HETATM 11 C C48 9RA . . . C 3 -2.962 17.609 -0.869 1 22.72 ? C48 9RA 500 A 1 HETATM 12 C C4 9RA . . . C 3 -2.245 18.867 -2.779 1 28.7 ? C4 9RA 500 A 1 HETATM 13 C C3 9RA . . . C 3 -1.501 19.984 -2.423 1 30.48 ? C3 9RA 500 A 1 HETATM 14 C C43 9RA . . . C 3 -1.845 20.786 -1.165 1 31.36 ? C43 9RA 500 A 1 HETATM 15 C C2 9RA . . . C 3 -0.463 20.402 -3.246 1 29.22 ? C2 9RA 500 A 1 HETATM 16 C C5 9RA . . . C 3 -1.932 18.189 -3.951 1 28.18 ? C5 9RA 500 A 1 HETATM 17 C C6 9RA . . . C 3 -0.89 18.605 -4.776 1 29.89 ? C6 9RA 500 A 1 HETATM 18 C C19 9RA . . . C 3 -0.601 17.805 -6.05 1 29.99 ? C19 9RA 500 A 1 HETATM 19 C C27 9RA . . . C 3 -0.548 16.317 -5.698 1 29.98 ? C27 9RA 500 A 1 HETATM 20 C C31 9RA . . . C 3 -1.73 18.057 -7.049 1 31.03 ? C31 9RA 500 A 1 HETATM 21 C C20 9RA . . . C 3 0.728 18.218 -6.693 1 31.7 ? C20 9RA 500 A 1 HETATM 22 C C21 9RA . . . C 3 0.852 19.737 -6.716 1 32.34 ? C21 9RA 500 A 1 HETATM 23 C C22 9RA . . . C 3 1.008 20.242 -5.281 1 32.02 ? C22 9RA 500 A 1 HETATM 24 C C1 9RA . . . C 3 -0.15 19.73 -4.418 1 28.93 ? C1 9RA 500 A 1 HETATM 25 C C39 9RA . . . C 3 1.031 21.768 -5.287 1 30.07 ? C39 9RA 500 A 1 HETATM 26 C C35 9RA . . . C 3 2.321 19.733 -4.692 1 30.69 ? C35 9RA 500 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 26 #