data_4K77
#
_model_server_result.job_id            XWVLOVchVeisaVoJ-mIJ8g 
_model_server_result.datetime_utc      '2024-10-11 00:33:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4k77 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1201}' 
#
_entry.id    4K77 
#
_exptl.entry_id    4K77 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              244.292 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-(cyclohexylamino)pyrido[3,4-d]pyrimidin-8(7H)-one 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          93.89 
_cell.angle_gamma         90 
_cell.entry_id            4K77 
_cell.length_a            42.714 
_cell.length_b            172.903 
_cell.length_c            44.547 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4K77 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
B,D,F 1 1 
A,C,E 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLU 181 A GLU 1033 1_555 A N PTR 182 A PTR 1034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale2 A C PTR 182 A PTR 1034 1_555 A N PTR 183 A PTR 1035 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale3 A C PTR 183 A PTR 1035 1_555 A N THR 184 A THR 1036 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale4 B C GLU 181 B GLU 1033 1_555 B N PTR 182 B PTR 1034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale5 B C PTR 182 B PTR 1034 1_555 B N PTR 183 B PTR 1035 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale6 B C PTR 183 B PTR 1035 1_555 B N THR 184 B THR 1036 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
#
_chem_comp.formula           'C13 H16 N4 O' 
_chem_comp.formula_weight    244.292 
_chem_comp.id                1Q4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-(cyclohexylamino)pyrido[3,4-d]pyrimidin-8(7H)-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O6 C5 1Q4 doub 1 n n 
N12 C11 1Q4 doub 2 n y 
N12 C7 1Q4 sing 3 n y 
C11 N10 1Q4 sing 4 n y 
C5 C7 1Q4 sing 5 n n 
C5 N3 1Q4 sing 6 n n 
C7 C8 1Q4 doub 7 n y 
N10 C9 1Q4 doub 8 n y 
N3 C2 1Q4 sing 9 n n 
C8 C9 1Q4 sing 10 n y 
C8 C1 1Q4 sing 11 n n 
C9 N13 1Q4 sing 12 n n 
C19 C18 1Q4 sing 13 n n 
C19 C14 1Q4 sing 14 n n 
C2 C1 1Q4 doub 15 n n 
C18 C17 1Q4 sing 16 n n 
C14 N13 1Q4 sing 17 n n 
C14 C15 1Q4 sing 18 n n 
C15 C16 1Q4 sing 19 n n 
C17 C16 1Q4 sing 20 n n 
C1 H1 1Q4 sing 21 n n 
C2 H3 1Q4 sing 22 n n 
C11 H4 1Q4 sing 23 n n 
N13 H5 1Q4 sing 24 n n 
C14 H6 1Q4 sing 25 n n 
C15 H7 1Q4 sing 26 n n 
C15 H8 1Q4 sing 27 n n 
C16 H9 1Q4 sing 28 n n 
C16 H10 1Q4 sing 29 n n 
C17 H11 1Q4 sing 30 n n 
C17 H12 1Q4 sing 31 n n 
C18 H13 1Q4 sing 32 n n 
C18 H14 1Q4 sing 33 n n 
C19 H15 1Q4 sing 34 n n 
C19 H16 1Q4 sing 35 n n 
N3 H2 1Q4 sing 36 n n 
#
_atom_sites.entry_id                     4K77 
_atom_sites.fract_transf_matrix[1][1]    0.023412 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001592 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005784 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.0225 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 1Q4 A 1 1201 1 1Q4 DRG . 
D 2 1Q4 B 1 1201 1 1Q4 DRG . 
E 3 HOH A 1 1301 2 HOH HOH . 
E 3 HOH A 2 1302 3 HOH HOH . 
E 3 HOH A 3 1303 6 HOH HOH . 
E 3 HOH A 4 1304 7 HOH HOH . 
E 3 HOH A 5 1305 9 HOH HOH . 
E 3 HOH A 6 1306 10 HOH HOH . 
E 3 HOH A 7 1307 12 HOH HOH . 
E 3 HOH A 8 1308 13 HOH HOH . 
E 3 HOH A 9 1309 14 HOH HOH . 
E 3 HOH A 10 1310 15 HOH HOH . 
E 3 HOH A 11 1311 18 HOH HOH . 
E 3 HOH A 12 1312 19 HOH HOH . 
E 3 HOH A 13 1313 22 HOH HOH . 
E 3 HOH A 14 1314 26 HOH HOH . 
E 3 HOH A 15 1315 27 HOH HOH . 
E 3 HOH A 16 1316 28 HOH HOH . 
E 3 HOH A 17 1317 30 HOH HOH . 
E 3 HOH A 18 1318 31 HOH HOH . 
E 3 HOH A 19 1319 39 HOH HOH . 
E 3 HOH A 20 1320 40 HOH HOH . 
E 3 HOH A 21 1321 42 HOH HOH . 
E 3 HOH A 22 1322 44 HOH HOH . 
E 3 HOH A 23 1323 46 HOH HOH . 
E 3 HOH A 24 1324 50 HOH HOH . 
E 3 HOH A 25 1325 52 HOH HOH . 
E 3 HOH A 26 1326 53 HOH HOH . 
E 3 HOH A 27 1327 55 HOH HOH . 
E 3 HOH A 28 1328 57 HOH HOH . 
E 3 HOH A 29 1329 58 HOH HOH . 
E 3 HOH A 30 1330 59 HOH HOH . 
E 3 HOH A 31 1331 60 HOH HOH . 
E 3 HOH A 32 1332 61 HOH HOH . 
E 3 HOH A 33 1333 63 HOH HOH . 
E 3 HOH A 34 1334 65 HOH HOH . 
E 3 HOH A 35 1335 66 HOH HOH . 
E 3 HOH A 36 1336 70 HOH HOH . 
E 3 HOH A 37 1337 73 HOH HOH . 
E 3 HOH A 38 1338 75 HOH HOH . 
E 3 HOH A 39 1339 80 HOH HOH . 
E 3 HOH A 40 1340 83 HOH HOH . 
E 3 HOH A 41 1341 84 HOH HOH . 
E 3 HOH A 42 1342 85 HOH HOH . 
E 3 HOH A 43 1343 86 HOH HOH . 
E 3 HOH A 44 1344 87 HOH HOH . 
E 3 HOH A 45 1345 88 HOH HOH . 
E 3 HOH A 46 1346 89 HOH HOH . 
E 3 HOH A 47 1347 93 HOH HOH . 
E 3 HOH A 48 1348 94 HOH HOH . 
E 3 HOH A 49 1349 96 HOH HOH . 
E 3 HOH A 50 1350 100 HOH HOH . 
E 3 HOH A 51 1351 101 HOH HOH . 
E 3 HOH A 52 1352 105 HOH HOH . 
E 3 HOH A 53 1353 109 HOH HOH . 
E 3 HOH A 54 1354 111 HOH HOH . 
E 3 HOH A 55 1355 113 HOH HOH . 
E 3 HOH A 56 1356 114 HOH HOH . 
E 3 HOH A 57 1357 115 HOH HOH . 
E 3 HOH A 58 1358 117 HOH HOH . 
E 3 HOH A 59 1359 120 HOH HOH . 
E 3 HOH A 60 1360 121 HOH HOH . 
E 3 HOH A 61 1361 123 HOH HOH . 
E 3 HOH A 62 1362 125 HOH HOH . 
E 3 HOH A 63 1363 126 HOH HOH . 
E 3 HOH A 64 1364 127 HOH HOH . 
E 3 HOH A 65 1365 128 HOH HOH . 
E 3 HOH A 66 1366 129 HOH HOH . 
E 3 HOH A 67 1367 130 HOH HOH . 
E 3 HOH A 68 1368 135 HOH HOH . 
E 3 HOH A 69 1369 136 HOH HOH . 
E 3 HOH A 70 1370 137 HOH HOH . 
E 3 HOH A 71 1371 138 HOH HOH . 
E 3 HOH A 72 1372 140 HOH HOH . 
E 3 HOH A 73 1373 145 HOH HOH . 
F 3 HOH B 1 1301 1 HOH HOH . 
F 3 HOH B 2 1302 4 HOH HOH . 
F 3 HOH B 3 1303 5 HOH HOH . 
F 3 HOH B 4 1304 8 HOH HOH . 
F 3 HOH B 5 1305 11 HOH HOH . 
F 3 HOH B 6 1306 16 HOH HOH . 
F 3 HOH B 7 1307 17 HOH HOH . 
F 3 HOH B 8 1308 20 HOH HOH . 
F 3 HOH B 9 1309 21 HOH HOH . 
F 3 HOH B 10 1310 23 HOH HOH . 
F 3 HOH B 11 1311 24 HOH HOH . 
F 3 HOH B 12 1312 25 HOH HOH . 
F 3 HOH B 13 1313 29 HOH HOH . 
F 3 HOH B 14 1314 32 HOH HOH . 
F 3 HOH B 15 1315 33 HOH HOH . 
F 3 HOH B 16 1316 34 HOH HOH . 
F 3 HOH B 17 1317 35 HOH HOH . 
F 3 HOH B 18 1318 36 HOH HOH . 
F 3 HOH B 19 1319 37 HOH HOH . 
F 3 HOH B 20 1320 38 HOH HOH . 
F 3 HOH B 21 1321 41 HOH HOH . 
F 3 HOH B 22 1322 43 HOH HOH . 
F 3 HOH B 23 1323 45 HOH HOH . 
F 3 HOH B 24 1324 47 HOH HOH . 
F 3 HOH B 25 1325 48 HOH HOH . 
F 3 HOH B 26 1326 49 HOH HOH . 
F 3 HOH B 27 1327 51 HOH HOH . 
F 3 HOH B 28 1328 54 HOH HOH . 
F 3 HOH B 29 1329 56 HOH HOH . 
F 3 HOH B 30 1330 62 HOH HOH . 
F 3 HOH B 31 1331 64 HOH HOH . 
F 3 HOH B 32 1332 67 HOH HOH . 
F 3 HOH B 33 1333 68 HOH HOH . 
F 3 HOH B 34 1334 69 HOH HOH . 
F 3 HOH B 35 1335 71 HOH HOH . 
F 3 HOH B 36 1336 72 HOH HOH . 
F 3 HOH B 37 1337 74 HOH HOH . 
F 3 HOH B 38 1338 76 HOH HOH . 
F 3 HOH B 39 1339 77 HOH HOH . 
F 3 HOH B 40 1340 78 HOH HOH . 
F 3 HOH B 41 1341 79 HOH HOH . 
F 3 HOH B 42 1342 81 HOH HOH . 
F 3 HOH B 43 1343 82 HOH HOH . 
F 3 HOH B 44 1344 90 HOH HOH . 
F 3 HOH B 45 1345 91 HOH HOH . 
F 3 HOH B 46 1346 92 HOH HOH . 
F 3 HOH B 47 1347 95 HOH HOH . 
F 3 HOH B 48 1348 97 HOH HOH . 
F 3 HOH B 49 1349 98 HOH HOH . 
F 3 HOH B 50 1350 99 HOH HOH . 
F 3 HOH B 51 1351 102 HOH HOH . 
F 3 HOH B 52 1352 103 HOH HOH . 
F 3 HOH B 53 1353 104 HOH HOH . 
F 3 HOH B 54 1354 106 HOH HOH . 
F 3 HOH B 55 1355 107 HOH HOH . 
F 3 HOH B 56 1356 108 HOH HOH . 
F 3 HOH B 57 1357 110 HOH HOH . 
F 3 HOH B 58 1358 112 HOH HOH . 
F 3 HOH B 59 1359 116 HOH HOH . 
F 3 HOH B 60 1360 118 HOH HOH . 
F 3 HOH B 61 1361 119 HOH HOH . 
F 3 HOH B 62 1362 122 HOH HOH . 
F 3 HOH B 63 1363 124 HOH HOH . 
F 3 HOH B 64 1364 131 HOH HOH . 
F 3 HOH B 65 1365 132 HOH HOH . 
F 3 HOH B 66 1366 133 HOH HOH . 
F 3 HOH B 67 1367 134 HOH HOH . 
F 3 HOH B 68 1368 139 HOH HOH . 
F 3 HOH B 69 1369 141 HOH HOH . 
F 3 HOH B 70 1370 142 HOH HOH . 
F 3 HOH B 71 1371 143 HOH HOH . 
F 3 HOH B 72 1372 144 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 1Q4 . . . C 2 4.479 58.339 1.608 1 18.1 ? C1 1Q4 1201 A 1 
HETATM 2 C C2 1Q4 . . . C 2 3.971 59.593 1.544 1 21.78 ? C2 1Q4 1201 A 1 
HETATM 3 N N3 1Q4 . . . C 2 4.639 60.615 0.912 1 22.75 ? N3 1Q4 1201 A 1 
HETATM 4 C C5 1Q4 . . . C 2 5.857 60.449 0.33 1 23.13 ? C5 1Q4 1201 A 1 
HETATM 5 O O6 1Q4 . . . C 2 6.423 61.376 -0.23 1 30.28 ? O6 1Q4 1201 A 1 
HETATM 6 C C7 1Q4 . . . C 2 6.49 59.128 0.362 1 22.42 ? C7 1Q4 1201 A 1 
HETATM 7 C C8 1Q4 . . . C 2 5.786 58.066 1 1 26.42 ? C8 1Q4 1201 A 1 
HETATM 8 C C9 1Q4 . . . C 2 6.391 56.786 1.013 1 31.8 ? C9 1Q4 1201 A 1 
HETATM 9 N N10 1Q4 . . . C 2 7.586 56.656 0.424 1 31.37 ? N10 1Q4 1201 A 1 
HETATM 10 C C11 1Q4 . . . C 2 8.195 57.678 -0.169 1 30.63 ? C11 1Q4 1201 A 1 
HETATM 11 N N12 1Q4 . . . C 2 7.676 58.889 -0.197 1 21.82 ? N12 1Q4 1201 A 1 
HETATM 12 N N13 1Q4 . . . C 2 5.755 55.713 1.627 1 36.92 ? N13 1Q4 1201 A 1 
HETATM 13 C C14 1Q4 . . . C 2 6.437 54.429 1.779 1 36.34 ? C14 1Q4 1201 A 1 
HETATM 14 C C15 1Q4 . . . C 2 7.01 54.324 3.197 1 33.36 ? C15 1Q4 1201 A 1 
HETATM 15 C C16 1Q4 . . . C 2 7.578 52.913 3.433 1 39.67 ? C16 1Q4 1201 A 1 
HETATM 16 C C17 1Q4 . . . C 2 6.52 51.828 3.198 1 33.89 ? C17 1Q4 1201 A 1 
HETATM 17 C C18 1Q4 . . . C 2 6.081 51.917 1.738 1 29.68 ? C18 1Q4 1201 A 1 
HETATM 18 C C19 1Q4 . . . C 2 5.434 53.296 1.532 1 33.15 ? C19 1Q4 1201 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           18 
#