data_4K8S
#
_model_server_result.job_id            vwWgdsCP-pJXttietmrj8A 
_model_server_result.datetime_utc      '2024-12-26 23:36:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4k8s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":401}' 
#
_entry.id    4K8S 
#
_exptl.entry_id    4K8S 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              504.703 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "(3S)-3-[(1R)-2-{[(4S)-6-ethyl-3,4-dihydrospiro[chromene-2,1'-cyclobutan]-4-yl]amino}-1-hydroxyethyl]-4-azabicyclo[11.3.1]heptadeca-1(17),13,15-trien-5-one" 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          105.24 
_cell.angle_gamma         90 
_cell.entry_id            4K8S 
_cell.length_a            81.841 
_cell.length_b            102.563 
_cell.length_c            101.318 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4K8S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D 1 1 
B,E 2 1 
C,F 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 158 A CYS 155 1_555 A SG CYS 362 A CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? 
disulf ? disulf2 A SG CYS 220 A CYS 217 1_555 A SG CYS 385 A CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? 
disulf ? disulf3 A SG CYS 272 A CYS 269 1_555 A SG CYS 322 A CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? 
disulf ? disulf4 B SG CYS 158 B CYS 155 1_555 B SG CYS 362 B CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? 
disulf ? disulf5 B SG CYS 220 B CYS 217 1_555 B SG CYS 385 B CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? 
disulf ? disulf6 B SG CYS 272 B CYS 269 1_555 B SG CYS 322 B CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? 
disulf ? disulf7 C SG CYS 158 C CYS 155 1_555 C SG CYS 362 C CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? 
disulf ? disulf8 C SG CYS 220 C CYS 217 1_555 C SG CYS 385 C CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
disulf ? disulf9 C SG CYS 272 C CYS 269 1_555 C SG CYS 322 C CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
#
_chem_comp.formula           'C32 H44 N2 O3' 
_chem_comp.formula_weight    504.703 
_chem_comp.id                1QT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "(3S)-3-[(1R)-2-{[(4S)-6-ethyl-3,4-dihydrospiro[chromene-2,1'-cyclobutan]-4-yl]amino}-1-hydroxyethyl]-4-azabicyclo[11.3.1]heptadeca-1(17),13,15-trien-5-one" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C13 C14 1QT sing 1 n n 
C13 C12 1QT sing 2 n n 
C14 C15 1QT doub 3 n y 
C14 C19 1QT sing 4 n y 
C12 C11 1QT sing 5 n n 
C15 C16 1QT sing 6 n y 
C19 C18 1QT doub 7 n y 
C11 C10 1QT sing 8 n n 
C16 C17 1QT doub 9 n y 
C18 C17 1QT sing 10 n y 
C18 C20 1QT sing 11 n n 
C20 C5 1QT sing 12 n n 
C10 C9 1QT sing 13 n n 
C9 C8 1QT sing 14 n n 
C5 N1 1QT sing 15 n n 
C5 C21 1QT sing 16 n n 
N1 C6 1QT sing 17 n n 
C8 C7 1QT sing 18 n n 
O2 C21 1QT sing 19 n n 
C21 C22 1QT sing 20 n n 
C6 C7 1QT sing 21 n n 
C6 O1 1QT doub 22 n n 
C22 N2 1QT sing 23 n n 
N2 C23 1QT sing 24 n n 
C31 C32 1QT sing 25 n n 
C31 C29 1QT sing 26 n n 
C30 C29 1QT doub 27 n y 
C30 C25 1QT sing 28 n y 
C23 C25 1QT sing 29 n n 
C23 C24 1QT sing 30 n n 
C29 C28 1QT sing 31 n y 
C25 C26 1QT doub 32 n y 
C24 C1 1QT sing 33 n n 
C28 C27 1QT doub 34 n y 
C26 C27 1QT sing 35 n y 
C26 O3 1QT sing 36 n n 
C1 O3 1QT sing 37 n n 
C1 C2 1QT sing 38 n n 
C1 C4 1QT sing 39 n n 
C2 C3 1QT sing 40 n n 
C4 C3 1QT sing 41 n n 
C2 H1 1QT sing 42 n n 
C2 H2 1QT sing 43 n n 
C3 H3 1QT sing 44 n n 
C3 H4 1QT sing 45 n n 
C4 H5 1QT sing 46 n n 
C4 H6 1QT sing 47 n n 
C24 H7 1QT sing 48 n n 
C24 H8 1QT sing 49 n n 
C27 H9 1QT sing 50 n n 
C28 H10 1QT sing 51 n n 
C31 H11 1QT sing 52 n n 
C31 H12 1QT sing 53 n n 
C32 H13 1QT sing 54 n n 
C32 H14 1QT sing 55 n n 
C32 H15 1QT sing 56 n n 
C30 H16 1QT sing 57 n n 
C23 H17 1QT sing 58 n n 
N2 H18 1QT sing 59 n n 
C22 H20 1QT sing 60 n n 
C22 H21 1QT sing 61 n n 
C21 H22 1QT sing 62 n n 
O2 H23 1QT sing 63 n n 
C5 H24 1QT sing 64 n n 
C20 H25 1QT sing 65 n n 
C20 H26 1QT sing 66 n n 
C19 H27 1QT sing 67 n n 
C17 H28 1QT sing 68 n n 
C16 H29 1QT sing 69 n n 
C15 H30 1QT sing 70 n n 
C13 H31 1QT sing 71 n n 
C13 H32 1QT sing 72 n n 
C12 H33 1QT sing 73 n n 
C12 H34 1QT sing 74 n n 
C11 H35 1QT sing 75 n n 
C11 H36 1QT sing 76 n n 
C10 H37 1QT sing 77 n n 
C10 H38 1QT sing 78 n n 
C9 H39 1QT sing 79 n n 
C9 H40 1QT sing 80 n n 
C8 H41 1QT sing 81 n n 
C8 H42 1QT sing 82 n n 
C7 H43 1QT sing 83 n n 
C7 H44 1QT sing 84 n n 
N1 H45 1QT sing 85 n n 
#
_atom_sites.entry_id                     4K8S 
_atom_sites.fract_transf_matrix[1][1]    0.012219 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003329 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00975 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01023 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 1QT A 1 401 1 1QT UNL . 
E 2 1QT B 1 401 1 1QT UNL . 
F 2 1QT C 1 401 1 1QT UNL . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 1QT . . . F 2 16.083 -7.855 48.989 1 35.6 ? C2 1QT 401 C 1 
HETATM 2 C C3 1QT . . . F 2 16.437 -6.349 48.876 1 36.35 ? C3 1QT 401 C 1 
HETATM 3 C C4 1QT . . . F 2 15.148 -5.983 49.6 1 38.74 ? C4 1QT 401 C 1 
HETATM 4 C C1 1QT . . . F 2 14.708 -7.427 49.503 1 37.35 ? C1 1QT 401 C 1 
HETATM 5 C C24 1QT . . . F 2 13.535 -7.523 48.531 1 34.3 ? C24 1QT 401 C 1 
HETATM 6 O O3 1QT . . . F 2 14.452 -7.981 50.754 1 41.44 ? O3 1QT 401 C 1 
HETATM 7 C C26 1QT . . . F 2 13.95 -9.278 50.722 1 39.94 ? C26 1QT 401 C 1 
HETATM 8 C C27 1QT . . . F 2 14.015 -10.057 51.899 1 37.73 ? C27 1QT 401 C 1 
HETATM 9 C C28 1QT . . . F 2 13.507 -11.341 51.899 1 37.9 ? C28 1QT 401 C 1 
HETATM 10 C C29 1QT . . . F 2 12.975 -11.876 50.712 1 35.34 ? C29 1QT 401 C 1 
HETATM 11 C C31 1QT . . . F 2 12.413 -13.26 50.65 1 33.78 ? C31 1QT 401 C 1 
HETATM 12 C C32 1QT . . . F 2 13.398 -14.273 50.126 1 38.66 ? C32 1QT 401 C 1 
HETATM 13 C C30 1QT . . . F 2 12.886 -11.115 49.578 1 37.47 ? C30 1QT 401 C 1 
HETATM 14 C C25 1QT . . . F 2 13.354 -9.809 49.575 1 37.01 ? C25 1QT 401 C 1 
HETATM 15 C C23 1QT . . . F 2 13.254 -9.008 48.251 1 36.41 ? C23 1QT 401 C 1 
HETATM 16 N N2 1QT . . . F 2 11.956 -9.244 47.471 1 37.26 ? N2 1QT 401 C 1 
HETATM 17 C C22 1QT . . . F 2 10.723 -8.676 48.134 1 39.55 ? C22 1QT 401 C 1 
HETATM 18 C C21 1QT . . . F 2 9.502 -9.475 47.622 1 36.9 ? C21 1QT 401 C 1 
HETATM 19 O O2 1QT . . . F 2 9.978 -10.816 47.616 1 32.79 ? O2 1QT 401 C 1 
HETATM 20 C C5 1QT . . . F 2 8.147 -9.286 48.411 1 35.51 ? C5 1QT 401 C 1 
HETATM 21 C C20 1QT . . . F 2 6.959 -10.083 47.828 1 37.03 ? C20 1QT 401 C 1 
HETATM 22 C C18 1QT . . . F 2 5.623 -9.63 48.448 1 34.58 ? C18 1QT 401 C 1 
HETATM 23 C C19 1QT . . . F 2 4.802 -8.719 47.829 1 37.38 ? C19 1QT 401 C 1 
HETATM 24 C C17 1QT . . . F 2 5.222 -10.135 49.664 1 39.94 ? C17 1QT 401 C 1 
HETATM 25 C C16 1QT . . . F 2 4.052 -9.729 50.317 1 38.97 ? C16 1QT 401 C 1 
HETATM 26 C C15 1QT . . . F 2 3.259 -8.8 49.7 1 39.15 ? C15 1QT 401 C 1 
HETATM 27 C C14 1QT . . . F 2 3.622 -8.31 48.445 1 39.15 ? C14 1QT 401 C 1 
HETATM 28 C C13 1QT . . . F 2 2.7 -7.293 47.785 1 39.66 ? C13 1QT 401 C 1 
HETATM 29 C C12 1QT . . . F 2 3.362 -5.932 47.789 1 43.66 ? C12 1QT 401 C 1 
HETATM 30 C C11 1QT . . . F 2 3.129 -5.253 49.114 1 45.91 ? C11 1QT 401 C 1 
HETATM 31 C C10 1QT . . . F 2 4.086 -4.097 49.312 1 46.69 ? C10 1QT 401 C 1 
HETATM 32 C C9 1QT . . . F 2 5.472 -4.507 48.909 1 47.89 ? C9 1QT 401 C 1 
HETATM 33 C C8 1QT . . . F 2 6.216 -5.273 50.019 1 43 ? C8 1QT 401 C 1 
HETATM 34 C C7 1QT . . . F 2 7.598 -5.638 49.473 1 38.2 ? C7 1QT 401 C 1 
HETATM 35 C C6 1QT . . . F 2 7.96 -7.128 49.556 1 39.85 ? C6 1QT 401 C 1 
HETATM 36 O O1 1QT . . . F 2 8.464 -7.551 50.568 1 38.55 ? O1 1QT 401 C 1 
HETATM 37 N N1 1QT . . . F 2 7.791 -7.874 48.468 1 37.64 ? N1 1QT 401 C 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           33 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           962 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           37 
#