data_4K8X # _model_server_result.job_id T8gg05XaL-OwWl-VrJluTg _model_server_result.datetime_utc '2024-11-30 17:16:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4k8x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":812}' # _entry.id 4K8X # _exptl.entry_id 4K8X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4K8X _cell.length_a 112.215 _cell.length_b 142.616 _cell.length_c 66.702 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4K8X _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 N N N ? 4 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 428 A CYS 428 1_555 A SG CYS 442 A CYS 442 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf2 A SG CYS 506 A CYS 506 1_555 A SG CYS 509 A CYS 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? covale ? covale1 B P DA 1 T DA 1 1_555 P O1 5CY . T 5CY 101 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.596 ? covale ? covale2 B P DA 1 T DA 1 1_555 P O1 5CY . T 5CY 101 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.602 ? covale ? covale3 C O3' DG 11 P DG 11 1_555 C P DOC 12 P DOC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.601 ? hydrog WATSON-CRICK hydrog1 B N1 DG 5 T DG 5 1_555 C N3 DOC 12 P DOC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 B N2 DG 5 T DG 5 1_555 C O2 DOC 12 P DOC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 B O6 DG 5 T DG 5 1_555 C N4 DOC 12 P DOC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 B N3 DC 6 T DC 6 1_555 C N1 DG 11 P DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 B N4 DC 6 T DC 6 1_555 C O6 DG 11 P DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 B O2 DC 6 T DC 6 1_555 C N2 DG 11 P DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 B N1 DG 7 T DG 7 1_555 C N3 DC 10 P DC 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 B N2 DG 7 T DG 7 1_555 C O2 DC 10 P DC 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 B O6 DG 7 T DG 7 1_555 C N4 DC 10 P DC 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 B N3 DC 8 T DC 8 1_555 C N1 DG 9 P DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 B N4 DC 8 T DC 8 1_555 C O6 DG 9 P DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 B O2 DC 8 T DC 8 1_555 C N2 DG 9 P DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 B N1 DA 9 T DA 9 1_555 C N3 DT 8 P DT 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 B N6 DA 9 T DA 9 1_555 C O4 DT 8 P DT 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 B N1 DG 10 T DG 10 1_555 C N3 DC 7 P DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 B N2 DG 10 T DG 10 1_555 C O2 DC 7 P DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 B O6 DG 10 T DG 10 1_555 C N4 DC 7 P DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 B N3 DT 11 T DT 11 1_555 C N1 DA 6 P DA 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 B O4 DT 11 T DT 11 1_555 C N6 DA 6 P DA 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 B N3 DT 12 T DT 12 1_555 C N1 DA 5 P DA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 B O4 DT 12 T DT 12 1_555 C N6 DA 5 P DA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 B N3 DC 13 T DC 13 1_555 C N1 DG 4 P DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 B N4 DC 13 T DC 13 1_555 C O6 DG 4 P DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 B O2 DC 13 T DC 13 1_555 C N2 DG 4 P DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 B N1 DG 14 T DG 14 1_555 C N3 DC 3 P DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 B N2 DG 14 T DG 14 1_555 C O2 DC 3 P DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 B O6 DG 14 T DG 14 1_555 C N4 DC 3 P DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 B N3 DC 15 T DC 15 1_555 C N1 DG 2 P DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 B N4 DC 15 T DC 15 1_555 C O6 DG 2 P DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 B O2 DC 15 T DC 15 1_555 C N2 DG 2 P DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 B N1 DG 16 T DG 16 1_555 C N3 DC 1 P DC 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog32 B N2 DG 16 T DG 16 1_555 C O2 DC 1 P DC 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog33 B O6 DG 16 T DG 16 1_555 C N4 DC 1 P DC 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 559 n n S O2 SO4 doub 560 n n S O3 SO4 sing 561 n n S O4 SO4 sing 562 n n # _atom_sites.entry_id 4K8X _atom_sites.fract_transf_matrix[1][1] 0.008911 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007012 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014992 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 SO4 A 1 801 801 SO4 SO4 . E 4 SO4 A 1 802 802 SO4 SO4 . F 4 SO4 A 1 803 803 SO4 SO4 . G 4 SO4 A 1 804 804 SO4 SO4 . H 4 SO4 A 1 805 805 SO4 SO4 . I 4 SO4 A 1 806 806 SO4 SO4 . J 4 SO4 A 1 807 807 SO4 SO4 . K 4 SO4 A 1 808 808 SO4 SO4 . L 4 SO4 A 1 809 809 SO4 SO4 . M 5 CL A 1 810 811 CL CL . N 4 SO4 A 1 811 102 SO4 SO4 . O 4 SO4 A 1 812 1 SO4 SO4 . P 6 5CY T 1 101 101 5CY 5CY . Q 7 EDO T 1 102 103 EDO EDO . R 8 HOH A 1 901 901 HOH HOH . R 8 HOH A 2 902 902 HOH HOH . R 8 HOH A 3 903 903 HOH HOH . R 8 HOH A 4 904 904 HOH HOH . R 8 HOH A 5 905 905 HOH HOH . R 8 HOH A 6 906 906 HOH HOH . R 8 HOH A 7 907 907 HOH HOH . R 8 HOH A 8 908 908 HOH HOH . R 8 HOH A 9 909 909 HOH HOH . R 8 HOH A 10 910 910 HOH HOH . R 8 HOH A 11 911 911 HOH HOH . R 8 HOH A 12 912 912 HOH HOH . R 8 HOH A 13 913 913 HOH HOH . R 8 HOH A 14 914 914 HOH HOH . R 8 HOH A 15 915 915 HOH HOH . R 8 HOH A 16 916 916 HOH HOH . R 8 HOH A 17 917 917 HOH HOH . R 8 HOH A 18 918 918 HOH HOH . R 8 HOH A 19 919 919 HOH HOH . R 8 HOH A 20 920 920 HOH HOH . R 8 HOH A 21 921 921 HOH HOH . R 8 HOH A 22 922 922 HOH HOH . R 8 HOH A 23 923 923 HOH HOH . R 8 HOH A 24 924 924 HOH HOH . R 8 HOH A 25 925 925 HOH HOH . R 8 HOH A 26 926 926 HOH HOH . R 8 HOH A 27 927 927 HOH HOH . R 8 HOH A 28 928 928 HOH HOH . R 8 HOH A 29 929 929 HOH HOH . R 8 HOH A 30 930 930 HOH HOH . R 8 HOH A 31 931 931 HOH HOH . R 8 HOH A 32 932 932 HOH HOH . R 8 HOH A 33 933 933 HOH HOH . R 8 HOH A 34 934 934 HOH HOH . R 8 HOH A 35 935 935 HOH HOH . R 8 HOH A 36 936 936 HOH HOH . R 8 HOH A 37 937 937 HOH HOH . R 8 HOH A 38 938 938 HOH HOH . R 8 HOH A 39 939 939 HOH HOH . R 8 HOH A 40 940 940 HOH HOH . R 8 HOH A 41 941 941 HOH HOH . R 8 HOH A 42 942 942 HOH HOH . R 8 HOH A 43 943 943 HOH HOH . R 8 HOH A 44 944 944 HOH HOH . R 8 HOH A 45 945 945 HOH HOH . R 8 HOH A 46 946 946 HOH HOH . R 8 HOH A 47 947 947 HOH HOH . R 8 HOH A 48 948 948 HOH HOH . R 8 HOH A 49 949 949 HOH HOH . R 8 HOH A 50 950 950 HOH HOH . R 8 HOH A 51 951 951 HOH HOH . R 8 HOH A 52 952 952 HOH HOH . R 8 HOH A 53 953 953 HOH HOH . R 8 HOH A 54 954 955 HOH HOH . R 8 HOH A 55 955 956 HOH HOH . R 8 HOH A 56 956 957 HOH HOH . R 8 HOH A 57 957 959 HOH HOH . R 8 HOH A 58 958 960 HOH HOH . R 8 HOH A 59 959 961 HOH HOH . R 8 HOH A 60 960 963 HOH HOH . R 8 HOH A 61 961 964 HOH HOH . R 8 HOH A 62 962 965 HOH HOH . R 8 HOH A 63 963 966 HOH HOH . R 8 HOH A 64 964 967 HOH HOH . R 8 HOH A 65 965 968 HOH HOH . R 8 HOH A 66 966 969 HOH HOH . R 8 HOH A 67 967 970 HOH HOH . R 8 HOH A 68 968 971 HOH HOH . R 8 HOH A 69 969 972 HOH HOH . R 8 HOH A 70 970 973 HOH HOH . R 8 HOH A 71 971 974 HOH HOH . R 8 HOH A 72 972 975 HOH HOH . R 8 HOH A 73 973 976 HOH HOH . R 8 HOH A 74 974 977 HOH HOH . R 8 HOH A 75 975 978 HOH HOH . R 8 HOH A 76 976 979 HOH HOH . R 8 HOH A 77 977 980 HOH HOH . R 8 HOH A 78 978 981 HOH HOH . R 8 HOH A 79 979 982 HOH HOH . R 8 HOH A 80 980 983 HOH HOH . R 8 HOH A 81 981 984 HOH HOH . R 8 HOH A 82 982 985 HOH HOH . R 8 HOH A 83 983 986 HOH HOH . R 8 HOH A 84 984 987 HOH HOH . R 8 HOH A 85 985 988 HOH HOH . R 8 HOH A 86 986 989 HOH HOH . R 8 HOH A 87 987 990 HOH HOH . R 8 HOH A 88 988 991 HOH HOH . R 8 HOH A 89 989 992 HOH HOH . R 8 HOH A 90 990 993 HOH HOH . R 8 HOH A 91 991 994 HOH HOH . R 8 HOH A 92 992 995 HOH HOH . R 8 HOH A 93 993 996 HOH HOH . R 8 HOH A 94 994 997 HOH HOH . R 8 HOH A 95 995 998 HOH HOH . R 8 HOH A 96 996 999 HOH HOH . R 8 HOH A 97 997 1000 HOH HOH . R 8 HOH A 98 998 1001 HOH HOH . R 8 HOH A 99 999 1002 HOH HOH . R 8 HOH A 100 1000 1003 HOH HOH . R 8 HOH A 101 1001 1004 HOH HOH . R 8 HOH A 102 1002 1005 HOH HOH . R 8 HOH A 103 1003 1006 HOH HOH . R 8 HOH A 104 1004 1007 HOH HOH . R 8 HOH A 105 1005 1008 HOH HOH . R 8 HOH A 106 1006 1009 HOH HOH . R 8 HOH A 107 1007 1010 HOH HOH . R 8 HOH A 108 1008 1011 HOH HOH . R 8 HOH A 109 1009 1012 HOH HOH . R 8 HOH A 110 1010 1013 HOH HOH . R 8 HOH A 111 1011 1014 HOH HOH . R 8 HOH A 112 1012 102 HOH HOH . R 8 HOH A 113 1013 1 HOH HOH . S 8 HOH T 1 201 954 HOH HOH . S 8 HOH T 2 202 962 HOH HOH . S 8 HOH T 3 203 1015 HOH HOH . S 8 HOH T 4 204 201 HOH HOH . S 8 HOH T 5 205 202 HOH HOH . S 8 HOH T 6 206 203 HOH HOH . S 8 HOH T 7 207 204 HOH HOH . S 8 HOH T 8 208 205 HOH HOH . S 8 HOH T 9 209 206 HOH HOH . S 8 HOH T 10 210 207 HOH HOH . S 8 HOH T 11 211 208 HOH HOH . S 8 HOH T 12 212 209 HOH HOH . T 8 HOH P 1 101 101 HOH HOH . T 8 HOH P 2 102 103 HOH HOH . T 8 HOH P 3 103 104 HOH HOH . T 8 HOH P 4 104 105 HOH HOH . T 8 HOH P 5 105 106 HOH HOH . T 8 HOH P 6 106 107 HOH HOH . T 8 HOH P 7 107 108 HOH HOH . T 8 HOH P 8 108 109 HOH HOH . T 8 HOH P 9 109 110 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . O 4 -37.714 34.233 -34.905 0.6 46.59 ? S SO4 812 A 1 HETATM 2 O O1 SO4 . . . O 4 -36.82 34.811 -35.908 0.6 42.03 ? O1 SO4 812 A 1 HETATM 3 O O2 SO4 . . . O 4 -39.06 34.242 -35.472 0.6 50.39 ? O2 SO4 812 A 1 HETATM 4 O O3 SO4 . . . O 4 -37.258 32.863 -34.624 0.6 46.38 ? O3 SO4 812 A 1 HETATM 5 O O4 SO4 . . . O 4 -37.746 35.005 -33.661 0.6 39.68 ? O4 SO4 812 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #