data_4K9H
#
_model_server_result.job_id            Y6W4-vnZw3bwrwzBpsmJdA 
_model_server_result.datetime_utc      '2024-10-19 16:42:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4k9h 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":401}' 
#
_entry.id    4K9H 
#
_exptl.entry_id    4K9H 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              610.666 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-cyclopentyl-N-[(2S,3R)-3-hydroxy-1-phenyl-4-{[3-(trifluoromethyl)benzyl]amino}butan-2-yl]-6-oxo-5-(2-oxopyrrolidin-1-yl)-1,6-dihydropyridine-3-carboxamide 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          104.01 
_cell.angle_gamma         90 
_cell.entry_id            4K9H 
_cell.length_a            82.538 
_cell.length_b            103.304 
_cell.length_c            100.856 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4K9H 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,G 1 1 
B,E,H 2 1 
C,F,I 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 158 A CYS 155 1_555 A SG CYS 362 A CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
disulf ? disulf2 A SG CYS 220 A CYS 217 1_555 A SG CYS 385 A CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? 
disulf ? disulf3 A SG CYS 272 A CYS 269 1_555 A SG CYS 322 A CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
disulf ? disulf4 B SG CYS 158 B CYS 155 1_555 B SG CYS 362 B CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? 
disulf ? disulf5 B SG CYS 220 B CYS 217 1_555 B SG CYS 385 B CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? 
disulf ? disulf6 B SG CYS 272 B CYS 269 1_555 B SG CYS 322 B CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
disulf ? disulf7 C SG CYS 158 C CYS 155 1_555 C SG CYS 362 C CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
disulf ? disulf8 C SG CYS 220 C CYS 217 1_555 C SG CYS 385 C CYS 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? 
disulf ? disulf9 C SG CYS 272 C CYS 269 1_555 C SG CYS 322 C CYS 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
#
_chem_comp.formula           'C33 H37 F3 N4 O4' 
_chem_comp.formula_weight    610.666 
_chem_comp.id                1QU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-cyclopentyl-N-[(2S,3R)-3-hydroxy-1-phenyl-4-{[3-(trifluoromethyl)benzyl]amino}butan-2-yl]-6-oxo-5-(2-oxopyrrolidin-1-yl)-1,6-dihydropyridine-3-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     N-((1S,2R)-1-benzyl-2-hydroxy-3-((3-trifluoromethyl)benzyl)amino)propyl)-1-cyclopentyl-6-oxo-5-(2-oxo-1-pyrrolidinyl)-1,6-dihydro-3-pyridinecarboxamide 
#
_atom_sites.entry_id                     4K9H 
_atom_sites.fract_transf_matrix[1][1]    0.012116 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003024 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00968 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010219 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 1QU A 1 401 1 1QU UNL . 
E 2 1QU B 1 401 1 1QU UNL . 
F 2 1QU C 1 401 1 1QU UNL . 
G 3 HOH A 1 501 4 HOH HOH . 
G 3 HOH A 2 502 6 HOH HOH . 
H 3 HOH B 1 501 3 HOH HOH . 
H 3 HOH B 2 502 5 HOH HOH . 
H 3 HOH B 3 503 8 HOH HOH . 
I 3 HOH C 1 501 1 HOH HOH . 
I 3 HOH C 2 502 2 HOH HOH . 
I 3 HOH C 3 503 7 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 1QU . . . D 2 60.616 -15.851 20.533 1 38.78 ? O1 1QU 401 A 1 
HETATM 2 C C1 1QU . . . D 2 61.409 -16.41 21.322 1 39.87 ? C1 1QU 401 A 1 
HETATM 3 C C2 1QU . . . D 2 60.931 -17.299 22.431 1 38.36 ? C2 1QU 401 A 1 
HETATM 4 C C3 1QU . . . D 2 62.227 -17.636 23.229 1 39.78 ? C3 1QU 401 A 1 
HETATM 5 C C4 1QU . . . D 2 63.393 -17.181 22.361 1 41.64 ? C4 1QU 401 A 1 
HETATM 6 N N1 1QU . . . D 2 62.775 -16.36 21.307 1 36.35 ? N1 1QU 401 A 1 
HETATM 7 C C33 1QU . . . D 2 63.463 -15.694 20.407 1 34.88 ? C33 1QU 401 A 1 
HETATM 8 C C13 1QU . . . D 2 64.233 -14.547 20.708 1 33.22 ? C13 1QU 401 A 1 
HETATM 9 C C5 1QU . . . D 2 63.344 -16.138 19.097 1 37.15 ? C5 1QU 401 A 1 
HETATM 10 O O4 1QU . . . D 2 62.653 -17.098 18.788 1 45.54 ? O4 1QU 401 A 1 
HETATM 11 N N2 1QU . . . D 2 63.975 -15.487 18.108 1 36 ? N2 1QU 401 A 1 
HETATM 12 C C6 1QU . . . D 2 63.812 -16.031 16.762 1 42.54 ? C6 1QU 401 A 1 
HETATM 13 C C7 1QU . . . D 2 65.204 -16.314 16.113 1 40.45 ? C7 1QU 401 A 1 
HETATM 14 C C8 1QU . . . D 2 65.191 -15.555 14.816 1 42.42 ? C8 1QU 401 A 1 
HETATM 15 C C9 1QU . . . D 2 64.197 -14.431 15.062 1 44.35 ? C9 1QU 401 A 1 
HETATM 16 C C10 1QU . . . D 2 63.063 -15.063 15.838 1 39.53 ? C10 1QU 401 A 1 
HETATM 17 C C11 1QU . . . D 2 64.719 -14.365 18.369 1 33.62 ? C11 1QU 401 A 1 
HETATM 18 C C12 1QU . . . D 2 64.897 -13.899 19.662 1 35.65 ? C12 1QU 401 A 1 
HETATM 19 C C26 1QU . . . D 2 65.742 -12.615 19.881 1 36.27 ? C26 1QU 401 A 1 
HETATM 20 O O2 1QU . . . D 2 66.281 -12.437 20.963 1 41.59 ? O2 1QU 401 A 1 
HETATM 21 N N3 1QU . . . D 2 65.562 -11.633 18.987 1 31.85 ? N3 1QU 401 A 1 
HETATM 22 C C27 1QU . . . D 2 66.35 -10.39 19.003 1 33.76 ? C27 1QU 401 A 1 
HETATM 23 C C31 1QU . . . D 2 66.96 -10.181 17.59 1 35.26 ? C31 1QU 401 A 1 
HETATM 24 C C20 1QU . . . D 2 67.531 -11.504 17.01 1 38.46 ? C20 1QU 401 A 1 
HETATM 25 C C21 1QU . . . D 2 68.316 -12.367 17.779 1 40.82 ? C21 1QU 401 A 1 
HETATM 26 C C22 1QU . . . D 2 68.793 -13.563 17.24 1 39.92 ? C22 1QU 401 A 1 
HETATM 27 C C23 1QU . . . D 2 68.538 -13.884 15.918 1 39.15 ? C23 1QU 401 A 1 
HETATM 28 C C24 1QU . . . D 2 67.78 -13.017 15.153 1 39.46 ? C24 1QU 401 A 1 
HETATM 29 C C25 1QU . . . D 2 67.266 -11.859 15.705 1 41.75 ? C25 1QU 401 A 1 
HETATM 30 C C28 1QU . . . D 2 65.668 -9.133 19.456 1 34.73 ? C28 1QU 401 A 1 
HETATM 31 O O3 1QU . . . D 2 66.571 -8.039 19.273 1 35.83 ? O3 1QU 401 A 1 
HETATM 32 C C29 1QU . . . D 2 65.296 -9.175 20.941 1 35.2 ? C29 1QU 401 A 1 
HETATM 33 N N4 1QU . . . D 2 64.923 -7.829 21.349 1 33.56 ? N4 1QU 401 A 1 
HETATM 34 C C30 1QU . . . D 2 64.881 -7.708 22.845 1 39.02 ? C30 1QU 401 A 1 
HETATM 35 C C14 1QU . . . D 2 66.356 -7.557 23.362 1 39.42 ? C14 1QU 401 A 1 
HETATM 36 C C15 1QU . . . D 2 67.262 -6.642 22.779 1 34.83 ? C15 1QU 401 A 1 
HETATM 37 C C19 1QU . . . D 2 66.771 -8.357 24.412 1 40.06 ? C19 1QU 401 A 1 
HETATM 38 C C18 1QU . . . D 2 68.096 -8.222 24.852 1 36.17 ? C18 1QU 401 A 1 
HETATM 39 C C17 1QU . . . D 2 68.972 -7.32 24.271 1 35.78 ? C17 1QU 401 A 1 
HETATM 40 C C16 1QU . . . D 2 68.565 -6.49 23.24 1 47.39 ? C16 1QU 401 A 1 
HETATM 41 C C32 1QU . . . D 2 69.567 -5.456 22.574 1 53.54 ? C32 1QU 401 A 1 
HETATM 42 F F2 1QU . . . D 2 70.702 -5.266 23.226 1 54.12 ? F2 1QU 401 A 1 
HETATM 43 F F3 1QU . . . D 2 69.064 -4.237 22.388 1 52.44 ? F3 1QU 401 A 1 
HETATM 44 F F1 1QU . . . D 2 69.856 -5.964 21.401 1 59.51 ? F1 1QU 401 A 1 
#
_model_server_stats.io_time_ms              52 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           44 
#