data_4K9U # _model_server_result.job_id yQ9d5CSLbFA5BOCpNCELBg _model_server_result.datetime_utc '2024-12-02 13:39:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4k9u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 4K9U # _exptl.entry_id 4K9U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 552.753 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N~2~-(methyl{[2-(propan-2-yl)-1,3-thiazol-4-yl]methyl}carbamoyl)-N-[(2S,5S)-5-{[(1,3-thiazol-5-ylmethoxy)carbonyl]amino}hexan-2-yl]-D-valinamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4K9U _cell.length_a 77.53 _cell.length_b 99.88 _cell.length_c 130.16 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4K9U _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 422 A CYS 442 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc2 B FE HEM . A HEM 601 1_555 C N30 5AW . A 5AW 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? # _chem_comp.formula 'C25 H40 N6 O4 S2' _chem_comp.formula_weight 552.753 _chem_comp.id 5AW _chem_comp.mon_nstd_flag . _chem_comp.name N~2~-(methyl{[2-(propan-2-yl)-1,3-thiazol-4-yl]methyl}carbamoyl)-N-[(2S,5S)-5-{[(1,3-thiazol-5-ylmethoxy)carbonyl]amino}hexan-2-yl]-D-valinamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C34 C33 5AW sing 1 n n C02 C03 5AW sing 2 n n C02 C04 5AW sing 3 n n C02 C01 5AW sing 4 n n S37 C04 5AW sing 5 n y S37 C36 5AW sing 6 n y O15 C14 5AW doub 7 n n C04 N05 5AW doub 8 n y C36 C06 5AW doub 9 n y C33 C13 5AW sing 10 n n C33 C35 5AW sing 11 n n O11 C10 5AW doub 12 n n C13 C14 5AW sing 13 n n C13 N12 5AW sing 14 n n C14 N16 5AW sing 15 n n N05 C06 5AW sing 16 n y C06 C07 5AW sing 17 n n C10 N12 5AW sing 18 n n C10 N08 5AW sing 19 n n C18 C17 5AW sing 20 n n C31 S32 5AW sing 21 n y C31 N30 5AW doub 22 n y N08 C07 5AW sing 23 n n N08 C09 5AW sing 24 n n N16 C17 5AW sing 25 n n S32 C28 5AW sing 26 n y C17 C19 5AW sing 27 n n C19 C20 5AW sing 28 n n C20 C21 5AW sing 29 n n O25 C24 5AW doub 30 n n N30 C29 5AW sing 31 n y N23 C24 5AW sing 32 n n N23 C21 5AW sing 33 n n C24 O26 5AW sing 34 n n C28 C29 5AW doub 35 n y C28 C27 5AW sing 36 n n C21 C22 5AW sing 37 n n O26 C27 5AW sing 38 n n C27 H1 5AW sing 39 n n C27 H2 5AW sing 40 n n C31 H3 5AW sing 41 n n C29 H4 5AW sing 42 n n N23 H5 5AW sing 43 n n C21 H6 5AW sing 44 n n C22 H7 5AW sing 45 n n C22 H8 5AW sing 46 n n C22 H9 5AW sing 47 n n C20 H10 5AW sing 48 n n C20 H11 5AW sing 49 n n C19 H12 5AW sing 50 n n C19 H13 5AW sing 51 n n C17 H14 5AW sing 52 n n C18 H15 5AW sing 53 n n C18 H16 5AW sing 54 n n C18 H17 5AW sing 55 n n N16 H18 5AW sing 56 n n C13 H19 5AW sing 57 n n C33 H20 5AW sing 58 n n C35 H21 5AW sing 59 n n C35 H22 5AW sing 60 n n C35 H23 5AW sing 61 n n C34 H24 5AW sing 62 n n C34 H25 5AW sing 63 n n C34 H26 5AW sing 64 n n N12 H27 5AW sing 65 n n C09 H28 5AW sing 66 n n C09 H29 5AW sing 67 n n C09 H30 5AW sing 68 n n C07 H31 5AW sing 69 n n C07 H32 5AW sing 70 n n C36 H33 5AW sing 71 n n C02 H34 5AW sing 72 n n C03 H35 5AW sing 73 n n C03 H36 5AW sing 74 n n C03 H37 5AW sing 75 n n C01 H38 5AW sing 76 n n C01 H39 5AW sing 77 n n C01 H40 5AW sing 78 n n # _atom_sites.entry_id 4K9U _atom_sites.fract_transf_matrix[1][1] 0.012898 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010012 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007683 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 601 500 HEM HEM . C 3 5AW A 1 602 600 5AW 5AW . D 3 5AW A 1 603 700 5AW 5AW . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O25 5AW . . . C 3 23.465 29.223 10.259 1 105.46 ? O25 5AW 602 A 1 HETATM 2 C C24 5AW . . . C 3 22.842 30.046 10.916 1 105.29 ? C24 5AW 602 A 1 HETATM 3 O O26 5AW . . . C 3 21.769 29.545 11.788 1 94.11 ? O26 5AW 602 A 1 HETATM 4 C C27 5AW . . . C 3 21.38 28.157 11.832 1 83.49 ? C27 5AW 602 A 1 HETATM 5 C C28 5AW . . . C 3 20.005 27.849 11.249 1 74 ? C28 5AW 602 A 1 HETATM 6 S S32 5AW . . . C 3 19.956 27.592 9.582 1 73.43 ? S32 5AW 602 A 1 HETATM 7 C C31 5AW . . . C 3 18.249 27.299 9.464 1 68.53 ? C31 5AW 602 A 1 HETATM 8 N N30 5AW . . . C 3 17.746 27.373 10.714 1 64.46 ? N30 5AW 602 A 1 HETATM 9 C C29 5AW . . . C 3 18.687 27.675 11.686 1 74.93 ? C29 5AW 602 A 1 HETATM 10 N N23 5AW . . . C 3 23.092 31.374 10.836 1 112.36 ? N23 5AW 602 A 1 HETATM 11 C C21 5AW . . . C 3 24.285 32.086 11.323 1 125.28 ? C21 5AW 602 A 1 HETATM 12 C C22 5AW . . . C 3 24.901 31.434 12.565 1 125.34 ? C22 5AW 602 A 1 HETATM 13 C C20 5AW . . . C 3 25.311 32.459 10.216 1 143.16 ? C20 5AW 602 A 1 HETATM 14 C C19 5AW . . . C 3 26.579 31.588 10.041 1 159.38 ? C19 5AW 602 A 1 HETATM 15 C C17 5AW . . . C 3 27.973 32.269 9.956 1 168 ? C17 5AW 602 A 1 HETATM 16 C C18 5AW . . . C 3 27.943 33.579 9.154 1 167.2 ? C18 5AW 602 A 1 HETATM 17 N N16 5AW . . . C 3 29.082 31.353 9.549 1 176.72 ? N16 5AW 602 A 1 HETATM 18 C C14 5AW . . . C 3 29.536 30.992 8.312 1 184.06 ? C14 5AW 602 A 1 HETATM 19 O O15 5AW . . . C 3 28.969 31.309 7.267 1 179.46 ? O15 5AW 602 A 1 HETATM 20 C C13 5AW . . . C 3 30.796 30.126 8.154 1 186.99 ? C13 5AW 602 A 1 HETATM 21 C C33 5AW . . . C 3 32.054 30.963 7.859 1 188.27 ? C33 5AW 602 A 1 HETATM 22 C C35 5AW . . . C 3 32.915 31.248 9.089 1 187.58 ? C35 5AW 602 A 1 HETATM 23 C C34 5AW . . . C 3 32.916 30.36 6.752 1 186.46 ? C34 5AW 602 A 1 HETATM 24 N N12 5AW . . . C 3 31.052 29.065 9.152 1 191.16 ? N12 5AW 602 A 1 HETATM 25 C C10 5AW . . . C 3 31.533 27.83 8.857 1 187.44 ? C10 5AW 602 A 1 HETATM 26 O O11 5AW . . . C 3 30.997 27.147 7.994 1 176.73 ? O11 5AW 602 A 1 HETATM 27 N N08 5AW . . . C 3 32.599 27.317 9.511 1 187.77 ? N08 5AW 602 A 1 HETATM 28 C C09 5AW . . . C 3 32.597 25.989 10.12 1 178.99 ? C09 5AW 602 A 1 HETATM 29 C C07 5AW . . . C 3 33.877 28.005 9.675 1 189.62 ? C07 5AW 602 A 1 HETATM 30 C C06 5AW . . . C 3 34.894 27.6 8.624 1 194.88 ? C06 5AW 602 A 1 HETATM 31 N N05 5AW . . . C 3 35.997 28.376 8.346 1 196.45 ? N05 5AW 602 A 1 HETATM 32 C C36 5AW . . . C 3 34.809 26.422 7.857 1 194.17 ? C36 5AW 602 A 1 HETATM 33 S S37 5AW . . . C 3 36.181 26.384 6.802 1 194.23 ? S37 5AW 602 A 1 HETATM 34 C C04 5AW . . . C 3 36.819 27.884 7.383 1 198.3 ? C04 5AW 602 A 1 HETATM 35 C C02 5AW . . . C 3 38.088 28.356 6.769 1 199.6 ? C02 5AW 602 A 1 HETATM 36 C C03 5AW . . . C 3 38.154 29.882 6.771 1 195.53 ? C03 5AW 602 A 1 HETATM 37 C C01 5AW . . . C 3 39.274 27.767 7.527 1 196.87 ? C01 5AW 602 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 34 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 37 #