data_4KAB # _model_server_result.job_id i74oSEgwIM5JNnFGNWQ38g _model_server_result.datetime_utc '2024-11-21 17:20:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4kab # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":701}' # _entry.id 4KAB # _exptl.entry_id 4KAB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.128 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-methyl-1,5-dihydropyrazolo[4,3-c]pyrazole _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4KAB _cell.length_a 45.96 _cell.length_b 88.59 _cell.length_c 136.89 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4KAB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 49 A CYS 456 1_555 A SG CYS 52 A CYS 459 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf2 B SG CYS 49 B CYS 456 1_555 B SG CYS 52 B CYS 459 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? # _chem_comp.formula 'C5 H6 N4' _chem_comp.formula_weight 122.128 _chem_comp.id 4KA _chem_comp.mon_nstd_flag . _chem_comp.name 3-methyl-1,5-dihydropyrazolo[4,3-c]pyrazole _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4KAB _atom_sites.fract_transf_matrix[1][1] 0.021758 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011288 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007305 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 4KA A 1 701 1 4KA 4KA . D 2 4KA B 1 701 1 4KA 4KA . E 3 HOH A 1 801 1 HOH HOH . E 3 HOH A 2 802 2 HOH HOH . E 3 HOH A 3 803 8 HOH HOH . E 3 HOH A 4 804 9 HOH HOH . E 3 HOH A 5 805 11 HOH HOH . E 3 HOH A 6 806 13 HOH HOH . E 3 HOH A 7 807 15 HOH HOH . E 3 HOH A 8 808 16 HOH HOH . E 3 HOH A 9 809 18 HOH HOH . E 3 HOH A 10 810 22 HOH HOH . E 3 HOH A 11 811 23 HOH HOH . E 3 HOH A 12 812 24 HOH HOH . E 3 HOH A 13 813 25 HOH HOH . E 3 HOH A 14 814 30 HOH HOH . E 3 HOH A 15 815 31 HOH HOH . E 3 HOH A 16 816 34 HOH HOH . E 3 HOH A 17 817 39 HOH HOH . E 3 HOH A 18 818 40 HOH HOH . E 3 HOH A 19 819 41 HOH HOH . E 3 HOH A 20 820 46 HOH HOH . E 3 HOH A 21 821 47 HOH HOH . E 3 HOH A 22 822 49 HOH HOH . E 3 HOH A 23 823 51 HOH HOH . E 3 HOH A 24 824 52 HOH HOH . E 3 HOH A 25 825 53 HOH HOH . E 3 HOH A 26 826 55 HOH HOH . E 3 HOH A 27 827 56 HOH HOH . E 3 HOH A 28 828 57 HOH HOH . E 3 HOH A 29 829 59 HOH HOH . E 3 HOH A 30 830 60 HOH HOH . E 3 HOH A 31 831 61 HOH HOH . E 3 HOH A 32 832 62 HOH HOH . E 3 HOH A 33 833 64 HOH HOH . E 3 HOH A 34 834 65 HOH HOH . E 3 HOH A 35 835 68 HOH HOH . E 3 HOH A 36 836 69 HOH HOH . E 3 HOH A 37 837 71 HOH HOH . F 3 HOH B 1 801 3 HOH HOH . F 3 HOH B 2 802 4 HOH HOH . F 3 HOH B 3 803 5 HOH HOH . F 3 HOH B 4 804 6 HOH HOH . F 3 HOH B 5 805 7 HOH HOH . F 3 HOH B 6 806 10 HOH HOH . F 3 HOH B 7 807 12 HOH HOH . F 3 HOH B 8 808 14 HOH HOH . F 3 HOH B 9 809 17 HOH HOH . F 3 HOH B 10 810 19 HOH HOH . F 3 HOH B 11 811 20 HOH HOH . F 3 HOH B 12 812 21 HOH HOH . F 3 HOH B 13 813 26 HOH HOH . F 3 HOH B 14 814 27 HOH HOH . F 3 HOH B 15 815 28 HOH HOH . F 3 HOH B 16 816 29 HOH HOH . F 3 HOH B 17 817 32 HOH HOH . F 3 HOH B 18 818 33 HOH HOH . F 3 HOH B 19 819 35 HOH HOH . F 3 HOH B 20 820 36 HOH HOH . F 3 HOH B 21 821 37 HOH HOH . F 3 HOH B 22 822 38 HOH HOH . F 3 HOH B 23 823 42 HOH HOH . F 3 HOH B 24 824 43 HOH HOH . F 3 HOH B 25 825 44 HOH HOH . F 3 HOH B 26 826 45 HOH HOH . F 3 HOH B 27 827 48 HOH HOH . F 3 HOH B 28 828 50 HOH HOH . F 3 HOH B 29 829 54 HOH HOH . F 3 HOH B 30 830 58 HOH HOH . F 3 HOH B 31 831 63 HOH HOH . F 3 HOH B 32 832 66 HOH HOH . F 3 HOH B 33 833 67 HOH HOH . F 3 HOH B 34 834 70 HOH HOH . F 3 HOH B 35 835 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 4KA . . . D 2 -7.646 -10.462 1.73 1 43.95 ? C1 4KA 701 B 1 HETATM 2 C C2 4KA . . . D 2 -8.699 -10.46 0.804 1 43.38 ? C2 4KA 701 B 1 HETATM 3 N N3 4KA . . . D 2 -7.13 -11.913 0.161 1 41.88 ? N3 4KA 701 B 1 HETATM 4 N N4 4KA . . . D 2 -8.384 -11.381 -0.164 1 40.09 ? N4 4KA 701 B 1 HETATM 5 C C5 4KA . . . D 2 -6.701 -11.399 1.287 1 42.64 ? C5 4KA 701 B 1 HETATM 6 N N6 4KA . . . D 2 -9.21 -8.998 2.366 1 47.42 ? N6 4KA 701 B 1 HETATM 7 N N7 4KA . . . D 2 -7.964 -9.549 2.706 1 46.45 ? N7 4KA 701 B 1 HETATM 8 C C8 4KA . . . D 2 -9.648 -9.52 1.245 1 45.29 ? C8 4KA 701 B 1 HETATM 9 C C9 4KA . . . D 2 -5.409 -11.745 1.992 1 42.14 ? C9 4KA 701 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 238 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 9 #