data_4KAR # _model_server_result.job_id n6n4Z8r4jQpVPyU8IPIalA _model_server_result.datetime_utc '2024-11-04 23:10:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4kar # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":302}' # _entry.id 4KAR # _exptl.entry_id 4KAR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 414.488 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NONAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4KAR _cell.length_a 53.99 _cell.length_b 116.64 _cell.length_c 141.38 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4KAR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H38 O10' _chem_comp.formula_weight 414.488 _chem_comp.id 2PE _chem_comp.mon_nstd_flag . _chem_comp.name 'NONAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 2PE sing 1 n n O1 HO1 2PE sing 2 n n C2 C3 2PE sing 3 n n C2 H21 2PE sing 4 n n C2 H22 2PE sing 5 n n C3 O4 2PE sing 6 n n C3 H31 2PE sing 7 n n C3 H32 2PE sing 8 n n O4 C5 2PE sing 9 n n C5 C6 2PE sing 10 n n C5 H51 2PE sing 11 n n C5 H52 2PE sing 12 n n C6 O7 2PE sing 13 n n C6 H61 2PE sing 14 n n C6 H62 2PE sing 15 n n O7 C8 2PE sing 16 n n C8 C9 2PE sing 17 n n C8 H81 2PE sing 18 n n C8 H82 2PE sing 19 n n C9 O10 2PE sing 20 n n C9 H91 2PE sing 21 n n C9 H92 2PE sing 22 n n O10 C11 2PE sing 23 n n C11 C12 2PE sing 24 n n C11 H111 2PE sing 25 n n C11 H112 2PE sing 26 n n C12 O13 2PE sing 27 n n C12 H121 2PE sing 28 n n C12 H122 2PE sing 29 n n O13 C14 2PE sing 30 n n C14 C15 2PE sing 31 n n C14 H141 2PE sing 32 n n C14 H142 2PE sing 33 n n C15 O16 2PE sing 34 n n C15 H151 2PE sing 35 n n C15 H152 2PE sing 36 n n O16 C17 2PE sing 37 n n C17 C18 2PE sing 38 n n C17 H171 2PE sing 39 n n C17 H172 2PE sing 40 n n C18 O19 2PE sing 41 n n C18 H181 2PE sing 42 n n C18 H182 2PE sing 43 n n O19 C20 2PE sing 44 n n C20 C21 2PE sing 45 n n C20 H201 2PE sing 46 n n C20 H202 2PE sing 47 n n C21 O22 2PE sing 48 n n C21 H211 2PE sing 49 n n C21 H212 2PE sing 50 n n O22 C23 2PE sing 51 n n C23 C24 2PE sing 52 n n C23 H231 2PE sing 53 n n C23 H232 2PE sing 54 n n C24 O25 2PE sing 55 n n C24 H241 2PE sing 56 n n C24 H242 2PE sing 57 n n O25 C26 2PE sing 58 n n C26 C27 2PE sing 59 n n C26 H261 2PE sing 60 n n C26 H262 2PE sing 61 n n C27 O28 2PE sing 62 n n C27 H271 2PE sing 63 n n C27 H272 2PE sing 64 n n O28 HO2 2PE sing 65 n n # _atom_sites.entry_id 4KAR _atom_sites.fract_transf_matrix[1][1] 0.018522 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008573 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007073 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 301 315 FAD FDD . F 2 FAD B 1 301 310 FAD FDD . G 2 FAD C 1 301 305 FAD FDD . H 2 FAD D 1 301 300 FAD FDD . I 3 2PE D 1 302 1 2PE 2PE . J 4 HOH A 1 401 1 HOH HOH . J 4 HOH A 2 402 2 HOH HOH . J 4 HOH A 3 403 7 HOH HOH . J 4 HOH A 4 404 18 HOH HOH . J 4 HOH A 5 405 20 HOH HOH . J 4 HOH A 6 406 21 HOH HOH . J 4 HOH A 7 407 22 HOH HOH . J 4 HOH A 8 408 37 HOH HOH . J 4 HOH A 9 409 39 HOH HOH . J 4 HOH A 10 410 40 HOH HOH . J 4 HOH A 11 411 52 HOH HOH . J 4 HOH A 12 412 53 HOH HOH . J 4 HOH A 13 413 54 HOH HOH . J 4 HOH A 14 414 55 HOH HOH . J 4 HOH A 15 415 57 HOH HOH . J 4 HOH A 16 416 62 HOH HOH . J 4 HOH A 17 417 64 HOH HOH . J 4 HOH A 18 418 67 HOH HOH . J 4 HOH A 19 419 68 HOH HOH . J 4 HOH A 20 420 70 HOH HOH . J 4 HOH A 21 421 77 HOH HOH . J 4 HOH A 22 422 79 HOH HOH . J 4 HOH A 23 423 80 HOH HOH . J 4 HOH A 24 424 81 HOH HOH . J 4 HOH A 25 425 85 HOH HOH . J 4 HOH A 26 426 86 HOH HOH . J 4 HOH A 27 427 87 HOH HOH . J 4 HOH A 28 428 88 HOH HOH . J 4 HOH A 29 429 91 HOH HOH . J 4 HOH A 30 430 94 HOH HOH . J 4 HOH A 31 431 96 HOH HOH . J 4 HOH A 32 432 97 HOH HOH . J 4 HOH A 33 433 103 HOH HOH . J 4 HOH A 34 434 104 HOH HOH . J 4 HOH A 35 435 109 HOH HOH . J 4 HOH A 36 436 113 HOH HOH . J 4 HOH A 37 437 117 HOH HOH . J 4 HOH A 38 438 119 HOH HOH . J 4 HOH A 39 439 121 HOH HOH . J 4 HOH A 40 440 123 HOH HOH . J 4 HOH A 41 441 124 HOH HOH . J 4 HOH A 42 442 133 HOH HOH . J 4 HOH A 43 443 137 HOH HOH . J 4 HOH A 44 444 146 HOH HOH . K 4 HOH B 1 401 3 HOH HOH . K 4 HOH B 2 402 8 HOH HOH . K 4 HOH B 3 403 10 HOH HOH . K 4 HOH B 4 404 15 HOH HOH . K 4 HOH B 5 405 29 HOH HOH . K 4 HOH B 6 406 30 HOH HOH . K 4 HOH B 7 407 36 HOH HOH . K 4 HOH B 8 408 41 HOH HOH . K 4 HOH B 9 409 42 HOH HOH . K 4 HOH B 10 410 44 HOH HOH . K 4 HOH B 11 411 47 HOH HOH . K 4 HOH B 12 412 48 HOH HOH . K 4 HOH B 13 413 49 HOH HOH . K 4 HOH B 14 414 56 HOH HOH . K 4 HOH B 15 415 61 HOH HOH . K 4 HOH B 16 416 69 HOH HOH . K 4 HOH B 17 417 73 HOH HOH . K 4 HOH B 18 418 95 HOH HOH . K 4 HOH B 19 419 106 HOH HOH . K 4 HOH B 20 420 107 HOH HOH . K 4 HOH B 21 421 108 HOH HOH . K 4 HOH B 22 422 110 HOH HOH . K 4 HOH B 23 423 118 HOH HOH . K 4 HOH B 24 424 125 HOH HOH . K 4 HOH B 25 425 126 HOH HOH . K 4 HOH B 26 426 127 HOH HOH . K 4 HOH B 27 427 128 HOH HOH . K 4 HOH B 28 428 140 HOH HOH . K 4 HOH B 29 429 141 HOH HOH . K 4 HOH B 30 430 142 HOH HOH . K 4 HOH B 31 431 143 HOH HOH . K 4 HOH B 32 432 150 HOH HOH . L 4 HOH C 1 401 9 HOH HOH . L 4 HOH C 2 402 12 HOH HOH . L 4 HOH C 3 403 13 HOH HOH . L 4 HOH C 4 404 17 HOH HOH . L 4 HOH C 5 405 23 HOH HOH . L 4 HOH C 6 406 24 HOH HOH . L 4 HOH C 7 407 25 HOH HOH . L 4 HOH C 8 408 27 HOH HOH . L 4 HOH C 9 409 28 HOH HOH . L 4 HOH C 10 410 31 HOH HOH . L 4 HOH C 11 411 32 HOH HOH . L 4 HOH C 12 412 38 HOH HOH . L 4 HOH C 13 413 45 HOH HOH . L 4 HOH C 14 414 46 HOH HOH . L 4 HOH C 15 415 50 HOH HOH . L 4 HOH C 16 416 59 HOH HOH . L 4 HOH C 17 417 60 HOH HOH . L 4 HOH C 18 418 63 HOH HOH . L 4 HOH C 19 419 66 HOH HOH . L 4 HOH C 20 420 71 HOH HOH . L 4 HOH C 21 421 76 HOH HOH . L 4 HOH C 22 422 78 HOH HOH . L 4 HOH C 23 423 82 HOH HOH . L 4 HOH C 24 424 93 HOH HOH . L 4 HOH C 25 425 101 HOH HOH . L 4 HOH C 26 426 102 HOH HOH . L 4 HOH C 27 427 111 HOH HOH . L 4 HOH C 28 428 115 HOH HOH . L 4 HOH C 29 429 116 HOH HOH . L 4 HOH C 30 430 120 HOH HOH . L 4 HOH C 31 431 122 HOH HOH . L 4 HOH C 32 432 129 HOH HOH . L 4 HOH C 33 433 130 HOH HOH . L 4 HOH C 34 434 134 HOH HOH . L 4 HOH C 35 435 135 HOH HOH . L 4 HOH C 36 436 136 HOH HOH . M 4 HOH D 1 401 4 HOH HOH . M 4 HOH D 2 402 5 HOH HOH . M 4 HOH D 3 403 6 HOH HOH . M 4 HOH D 4 404 11 HOH HOH . M 4 HOH D 5 405 14 HOH HOH . M 4 HOH D 6 406 16 HOH HOH . M 4 HOH D 7 407 19 HOH HOH . M 4 HOH D 8 408 26 HOH HOH . M 4 HOH D 9 409 33 HOH HOH . M 4 HOH D 10 410 34 HOH HOH . M 4 HOH D 11 411 35 HOH HOH . M 4 HOH D 12 412 43 HOH HOH . M 4 HOH D 13 413 51 HOH HOH . M 4 HOH D 14 414 58 HOH HOH . M 4 HOH D 15 415 65 HOH HOH . M 4 HOH D 16 416 72 HOH HOH . M 4 HOH D 17 417 74 HOH HOH . M 4 HOH D 18 418 75 HOH HOH . M 4 HOH D 19 419 83 HOH HOH . M 4 HOH D 20 420 84 HOH HOH . M 4 HOH D 21 421 89 HOH HOH . M 4 HOH D 22 422 90 HOH HOH . M 4 HOH D 23 423 92 HOH HOH . M 4 HOH D 24 424 98 HOH HOH . M 4 HOH D 25 425 99 HOH HOH . M 4 HOH D 26 426 100 HOH HOH . M 4 HOH D 27 427 105 HOH HOH . M 4 HOH D 28 428 112 HOH HOH . M 4 HOH D 29 429 114 HOH HOH . M 4 HOH D 30 430 131 HOH HOH . M 4 HOH D 31 431 132 HOH HOH . M 4 HOH D 32 432 138 HOH HOH . M 4 HOH D 33 433 139 HOH HOH . M 4 HOH D 34 434 144 HOH HOH . M 4 HOH D 35 435 145 HOH HOH . M 4 HOH D 36 436 147 HOH HOH . M 4 HOH D 37 437 148 HOH HOH . M 4 HOH D 38 438 149 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 2PE . . . I 3 57.937 23.484 116.1 1 65.94 ? O1 2PE 302 D 1 HETATM 2 C C2 2PE . . . I 3 56.864 23.811 115.205 1 69.09 ? C2 2PE 302 D 1 HETATM 3 C C3 2PE . . . I 3 57.217 23.46 113.769 1 68.93 ? C3 2PE 302 D 1 HETATM 4 O O4 2PE . . . I 3 57.578 24.585 112.964 1 68.74 ? O4 2PE 302 D 1 HETATM 5 C C5 2PE . . . I 3 58.055 24.107 111.698 1 72.24 ? C5 2PE 302 D 1 HETATM 6 C C6 2PE . . . I 3 57.997 25.179 110.616 1 72.51 ? C6 2PE 302 D 1 HETATM 7 O O7 2PE . . . I 3 58.837 26.276 110.975 1 75.88 ? O7 2PE 302 D 1 HETATM 8 C C8 2PE . . . I 3 60.159 26.106 110.488 1 72.69 ? C8 2PE 302 D 1 HETATM 9 C C9 2PE . . . I 3 61.096 27.096 111.165 1 67.57 ? C9 2PE 302 D 1 HETATM 10 O O10 2PE . . . I 3 60.667 27.417 112.489 1 66.45 ? O10 2PE 302 D 1 HETATM 11 C C11 2PE . . . I 3 61.545 28.379 113.073 1 65.21 ? C11 2PE 302 D 1 HETATM 12 C C12 2PE . . . I 3 60.912 29.156 114.222 1 66.65 ? C12 2PE 302 D 1 HETATM 13 O O13 2PE . . . I 3 61.401 28.622 115.455 1 66.1 ? O13 2PE 302 D 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #