data_4KEQ
#
_model_server_result.job_id            SD2AQWJYBAw-EJlAaCxk6w 
_model_server_result.datetime_utc      '2024-10-18 16:23:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4keq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":303}' 
#
_entry.id    4KEQ 
#
_exptl.entry_id    4KEQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              165.146 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            7-hydroxy-6-methylfuro[3,4-c]pyridin-3(1H)-one 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          117.73 
_cell.angle_gamma         90 
_cell.entry_id            4KEQ 
_cell.length_a            84.426 
_cell.length_b            39.576 
_cell.length_c            84.66 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4KEQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L 1 1,2 
A,B,C,D,E,F,G,H,I,J,K,L 2 1,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_554 -x,y,-z-1 -1 0 0 0 1 0 0 0 -1 39.39277 0 -74.936809 
3 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 96 A HIS 96 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? 
metalc ? metalc2 A ND1 HIS 98 A HIS 98 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? 
metalc ? metalc3 A NE2 HIS 101 A HIS 101 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
metalc ? metalc4 A NE2 HIS 185 A HIS 185 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? 
metalc ? metalc5 A OD1 ASP 207 A ASP 207 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? 
metalc ? metalc6 A OD2 ASP 207 A ASP 207 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? 
metalc ? metalc7 A OD2 ASP 207 A ASP 207 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? 
metalc ? metalc8 A NE2 HIS 252 A HIS 252 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? 
metalc ? metalc9 C ZN ZN . A ZN 302 1_555 L O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? 
#
_chem_comp.formula           'C8 H7 N O3' 
_chem_comp.formula_weight    165.146 
_chem_comp.id                5PN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              7-hydroxy-6-methylfuro[3,4-c]pyridin-3(1H)-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     5-Pyridoxolactone 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CAI 5PN sing 1 n n 
CAI CAJ 5PN doub 2 n y 
CAI NAF 5PN sing 3 n y 
OAC CAJ 5PN sing 4 n n 
CAJ CAL 5PN sing 5 n y 
NAF CAD 5PN doub 6 n y 
CAL CAK 5PN doub 7 n y 
CAL CAE 5PN sing 8 n n 
CAD CAK 5PN sing 9 n y 
CAK CAH 5PN sing 10 n n 
CAE OAG 5PN sing 11 n n 
CAH OAG 5PN sing 12 n n 
CAH OAB 5PN doub 13 n n 
CAA H1 5PN sing 14 n n 
CAA H2 5PN sing 15 n n 
CAA H3 5PN sing 16 n n 
CAD H4 5PN sing 17 n n 
CAE H5 5PN sing 18 n n 
CAE H6 5PN sing 19 n n 
OAC H7 5PN sing 20 n n 
#
_atom_sites.entry_id                     4KEQ 
_atom_sites.fract_transf_matrix[1][1]    0.011845 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006227 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.025268 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013345 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 301 300 ZN ZN . 
C 2 ZN A 1 302 301 ZN ZN . 
D 3 5PN A 1 303 302 5PN 5PN . 
E 3 5PN A 1 304 303 5PN 5PN . 
F 4 GOL A 1 305 1 GOL GOL . 
G 4 GOL A 1 306 2 GOL GOL . 
H 4 GOL A 1 307 3 GOL GOL . 
I 5 EDO A 1 308 1 EDO EDO . 
J 5 EDO A 1 309 2 EDO EDO . 
K 5 EDO A 1 310 3 EDO EDO . 
L 6 HOH A 1 401 1 HOH HOH . 
L 6 HOH A 2 402 2 HOH HOH . 
L 6 HOH A 3 403 3 HOH HOH . 
L 6 HOH A 4 404 4 HOH HOH . 
L 6 HOH A 5 405 5 HOH HOH . 
L 6 HOH A 6 406 6 HOH HOH . 
L 6 HOH A 7 407 7 HOH HOH . 
L 6 HOH A 8 408 8 HOH HOH . 
L 6 HOH A 9 409 9 HOH HOH . 
L 6 HOH A 10 410 10 HOH HOH . 
L 6 HOH A 11 411 11 HOH HOH . 
L 6 HOH A 12 412 12 HOH HOH . 
L 6 HOH A 13 413 13 HOH HOH . 
L 6 HOH A 14 414 14 HOH HOH . 
L 6 HOH A 15 415 15 HOH HOH . 
L 6 HOH A 16 416 16 HOH HOH . 
L 6 HOH A 17 417 17 HOH HOH . 
L 6 HOH A 18 418 18 HOH HOH . 
L 6 HOH A 19 419 19 HOH HOH . 
L 6 HOH A 20 420 20 HOH HOH . 
L 6 HOH A 21 421 21 HOH HOH . 
L 6 HOH A 22 422 22 HOH HOH . 
L 6 HOH A 23 423 23 HOH HOH . 
L 6 HOH A 24 424 24 HOH HOH . 
L 6 HOH A 25 425 25 HOH HOH . 
L 6 HOH A 26 426 26 HOH HOH . 
L 6 HOH A 27 427 27 HOH HOH . 
L 6 HOH A 28 428 28 HOH HOH . 
L 6 HOH A 29 429 29 HOH HOH . 
L 6 HOH A 30 430 30 HOH HOH . 
L 6 HOH A 31 431 31 HOH HOH . 
L 6 HOH A 32 432 32 HOH HOH . 
L 6 HOH A 33 433 33 HOH HOH . 
L 6 HOH A 34 434 34 HOH HOH . 
L 6 HOH A 35 435 35 HOH HOH . 
L 6 HOH A 36 436 36 HOH HOH . 
L 6 HOH A 37 437 37 HOH HOH . 
L 6 HOH A 38 438 38 HOH HOH . 
L 6 HOH A 39 439 39 HOH HOH . 
L 6 HOH A 40 440 40 HOH HOH . 
L 6 HOH A 41 441 41 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA 5PN . . . D 3 1.685 6.991 -12.755 0.77 19.65 ? CAA 5PN 303 A 1 
HETATM 2 C CAI 5PN . . . D 3 0.689 6.192 -12.2 0.77 21.75 ? CAI 5PN 303 A 1 
HETATM 3 N NAF 5PN . . . D 3 -0.524 6.684 -11.934 0.77 18.31 ? NAF 5PN 303 A 1 
HETATM 4 C CAD 5PN . . . D 3 -1.505 5.852 -11.382 0.77 21.89 ? CAD 5PN 303 A 1 
HETATM 5 C CAK 5PN . . . D 3 -1.219 4.575 -11.122 0.77 23.94 ? CAK 5PN 303 A 1 
HETATM 6 C CAH 5PN . . . D 3 -1.945 3.597 -10.603 0.77 23.28 ? CAH 5PN 303 A 1 
HETATM 7 O OAB 5PN . . . D 3 -3.094 3.79 -10.217 0.77 23.36 ? OAB 5PN 303 A 1 
HETATM 8 O OAG 5PN . . . D 3 -1.283 2.417 -10.497 0.77 26.01 ? OAG 5PN 303 A 1 
HETATM 9 C CAE 5PN . . . D 3 0.019 2.714 -11.02 0.77 17.72 ? CAE 5PN 303 A 1 
HETATM 10 C CAL 5PN . . . D 3 -0.01 4.067 -11.384 0.77 22.4 ? CAL 5PN 303 A 1 
HETATM 11 C CAJ 5PN . . . D 3 0.922 4.858 -11.907 0.77 21.81 ? CAJ 5PN 303 A 1 
HETATM 12 O OAC 5PN . . . D 3 2.148 4.338 -12.171 0.77 20.36 ? OAC 5PN 303 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           267 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           12 
#