data_4KGJ
#
_model_server_result.job_id            g9ymg22ZbfC0CbOqPX1b2g 
_model_server_result.datetime_utc      '2024-11-28 18:27:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4kgj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"R","auth_seq_id":919}' 
#
_entry.id    4KGJ 
#
_exptl.entry_id    4KGJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              150.087 
_entity.id                          8 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'L(+)-TARTARIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4KGJ 
_cell.length_a            259.343 
_cell.length_b            259.343 
_cell.length_c            71.379 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4KGJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 software_defined_assembly 1 
PISA monomeric 1 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G,H,I,J,U 1 1 
B,E,F,K,L,M,N,O,P,Q,R,S,T,V 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 8 Q N N 
? 8 R N N 
#
loop_
_pdbx_entity_branch.entity_id
_pdbx_entity_branch.type
2 oligosaccharide 
3 oligosaccharide 
4 oligosaccharide 
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.details
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.atom_stereo_config_1
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.atom_stereo_config_2
_pdbx_entity_branch_link.value_order
1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 
2 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 
3 ? 3 3 2 BMA NAG C1 O1 . O4 HO4 . sing 
4 ? 3 4 3 MAN BMA C1 O1 . O3 HO3 . sing 
5 ? 3 5 3 MAN BMA C1 O1 . O6 HO6 . sing 
6 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing 
7 ? 4 3 2 BMA NAG C1 O1 . O4 HO4 . sing 
8 ? 4 4 3 MAN BMA C1 O1 . O6 HO6 . sing 
9 ? 4 5 4 MAN MAN C1 O1 . O6 HO6 . sing 
10 ? 4 6 5 MAN MAN C1 O1 . O2 HO2 . sing 
11 ? 4 7 4 MAN MAN C1 O1 . O3 HO3 . sing 
12 ? 4 8 3 MAN BMA C1 O1 . O3 HO3 . sing 
13 ? 4 9 8 MAN MAN C1 O1 . O2 HO2 . sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
2 n C NAG 1 C 1 NAG C 951 NAG 
2 n C NAG 2 C 2 NAG C 952 NAG 
3 n D NAG 1 D 1 NAG C 991 NAG 
3 n D NAG 2 D 2 NAG C 992 NAG 
3 n D BMA 3 D 3 BMA C 993 BMA 
3 n D MAN 4 D 4 MAN C 995 MAN 
3 n D MAN 5 D 5 MAN C 994 MAN 
2 n E NAG 1 E 1 NAG D 951 NAG 
2 n E NAG 2 E 2 NAG D 952 NAG 
4 n F NAG 1 F 1 NAG D 991 NAG 
4 n F NAG 2 F 2 NAG D 992 NAG 
4 n F BMA 3 F 3 BMA D 993 BMA 
4 n F MAN 4 F 4 MAN D 994 MAN 
4 n F MAN 5 F 5 MAN D 997 MAN 
4 n F MAN 6 F 6 MAN D 998 MAN 
4 n F MAN 7 F 7 MAN D 996 MAN 
4 n F MAN 8 F 8 MAN D 995 MAN 
4 n F MAN 9 F 9 MAN D 999 MAN 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 515 A CYS 541 1_555 A SG CYS 551 A CYS 577 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf2 B SG CYS 515 B CYS 541 1_555 B SG CYS 551 B CYS 577 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.029 ? 
covale ? covale1 A ND2 ASN 84 A ASN 110 1_555 G C1 NAG . A NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? 
covale ? covale2 A ND2 ASN 346 A ASN 372 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? 
covale ? covale3 A ND2 ASN 389 A ASN 415 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? 
covale ? covale4 B ND2 ASN 84 B ASN 110 1_555 K C1 NAG . B NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? 
covale ? covale5 B ND2 ASN 346 B ASN 372 1_555 F C1 NAG . F NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
covale ? covale6 B ND2 ASN 389 B ASN 415 1_555 E C1 NAG . E NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale7 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? 
covale ? covale8 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? 
covale ? covale9 D O4 NAG . D NAG 2 1_555 D C1 BMA . D BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? 
covale ? covale10 D O3 BMA . D BMA 3 1_555 D C1 MAN . D MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? 
covale ? covale11 D O6 BMA . D BMA 3 1_555 D C1 MAN . D MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale12 E O4 NAG . E NAG 1 1_555 E C1 NAG . E NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? 
covale ? covale13 F O4 NAG . F NAG 1 1_555 F C1 NAG . F NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.425 ? 
covale ? covale14 F O4 NAG . F NAG 2 1_555 F C1 BMA . F BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? 
covale ? covale15 F O6 BMA . F BMA 3 1_555 F C1 MAN . F MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? 
covale ? covale16 F O3 BMA . F BMA 3 1_555 F C1 MAN . F MAN 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? 
covale ? covale17 F O6 MAN . F MAN 4 1_555 F C1 MAN . F MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? 
covale ? covale18 F O3 MAN . F MAN 4 1_555 F C1 MAN . F MAN 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? 
covale ? covale19 F O2 MAN . F MAN 5 1_555 F C1 MAN . F MAN 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? 
covale ? covale20 F O2 MAN . F MAN 8 1_555 F C1 MAN . F MAN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? 
#
_chem_comp.formula           'C4 H6 O6' 
_chem_comp.formula_weight    150.087 
_chem_comp.id                TLA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'L(+)-TARTARIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C1 TLA doub 419 n n 
O11 C1 TLA sing 420 n n 
O11 H11 TLA sing 421 n n 
C1 C2 TLA sing 422 n n 
C2 O2 TLA sing 423 n n 
C2 C3 TLA sing 424 n n 
C2 H2 TLA sing 425 n n 
O2 HA TLA sing 426 n n 
C3 O3 TLA sing 427 n n 
C3 C4 TLA sing 428 n n 
C3 H3 TLA sing 429 n n 
O3 HB TLA sing 430 n n 
C4 O4 TLA doub 431 n n 
C4 O41 TLA sing 432 n n 
O41 H41 TLA sing 433 n n 
#
_atom_sites.entry_id                     4KGJ 
_atom_sites.fract_transf_matrix[1][1]    0.003856 
_atom_sites.fract_transf_matrix[1][2]    0.002226 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004452 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01401 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 5 NAG A 1 901 901 NAG NAG . 
H 6 GOL A 1 909 1 GOL GOL . 
I 6 GOL A 1 910 7 GOL GOL . 
J 7 IDF A 1 911 1 IDF IDF . 
K 5 NAG B 1 901 901 NAG NAG . 
L 6 GOL B 1 913 2 GOL GOL . 
M 6 GOL B 1 914 3 GOL GOL . 
N 6 GOL B 1 915 4 GOL GOL . 
O 6 GOL B 1 916 5 GOL GOL . 
P 6 GOL B 1 917 6 GOL GOL . 
Q 8 TLA B 1 918 1 TLA TLA . 
R 8 TLA B 1 919 2 TLA TLA . 
S 7 IDF B 1 920 2 IDF IDF . 
T 9 CL B 1 921 1 CL CL . 
U 10 HOH A 1 1001 2 HOH HOH . 
U 10 HOH A 2 1002 3 HOH HOH . 
U 10 HOH A 3 1003 8 HOH HOH . 
U 10 HOH A 4 1004 10 HOH HOH . 
U 10 HOH A 5 1005 13 HOH HOH . 
U 10 HOH A 6 1006 15 HOH HOH . 
U 10 HOH A 7 1007 16 HOH HOH . 
U 10 HOH A 8 1008 19 HOH HOH . 
U 10 HOH A 9 1009 20 HOH HOH . 
U 10 HOH A 10 1010 25 HOH HOH . 
U 10 HOH A 11 1011 31 HOH HOH . 
U 10 HOH A 12 1012 33 HOH HOH . 
U 10 HOH A 13 1013 39 HOH HOH . 
U 10 HOH A 14 1014 40 HOH HOH . 
U 10 HOH A 15 1015 44 HOH HOH . 
U 10 HOH A 16 1016 46 HOH HOH . 
U 10 HOH A 17 1017 49 HOH HOH . 
V 10 HOH B 1 1001 4 HOH HOH . 
V 10 HOH B 2 1002 5 HOH HOH . 
V 10 HOH B 3 1003 6 HOH HOH . 
V 10 HOH B 4 1004 7 HOH HOH . 
V 10 HOH B 5 1005 9 HOH HOH . 
V 10 HOH B 6 1006 11 HOH HOH . 
V 10 HOH B 7 1007 12 HOH HOH . 
V 10 HOH B 8 1008 14 HOH HOH . 
V 10 HOH B 9 1009 17 HOH HOH . 
V 10 HOH B 10 1010 18 HOH HOH . 
V 10 HOH B 11 1011 21 HOH HOH . 
V 10 HOH B 12 1012 22 HOH HOH . 
V 10 HOH B 13 1013 23 HOH HOH . 
V 10 HOH B 14 1014 24 HOH HOH . 
V 10 HOH B 15 1015 26 HOH HOH . 
V 10 HOH B 16 1016 27 HOH HOH . 
V 10 HOH B 17 1017 28 HOH HOH . 
V 10 HOH B 18 1018 29 HOH HOH . 
V 10 HOH B 19 1019 30 HOH HOH . 
V 10 HOH B 20 1020 32 HOH HOH . 
V 10 HOH B 21 1021 34 HOH HOH . 
V 10 HOH B 22 1022 35 HOH HOH . 
V 10 HOH B 23 1023 36 HOH HOH . 
V 10 HOH B 24 1024 37 HOH HOH . 
V 10 HOH B 25 1025 38 HOH HOH . 
V 10 HOH B 26 1026 41 HOH HOH . 
V 10 HOH B 27 1027 42 HOH HOH . 
V 10 HOH B 28 1028 43 HOH HOH . 
V 10 HOH B 29 1029 45 HOH HOH . 
V 10 HOH B 30 1030 47 HOH HOH . 
V 10 HOH B 31 1031 48 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 TLA . . . R 8 274.353 -13.96 -14.716 1 72.44 ? O1 TLA 919 B 1 
HETATM 2 O O11 TLA . . . R 8 272.562 -12.702 -14.896 1 72.01 ? O11 TLA 919 B 1 
HETATM 3 C C1 TLA . . . R 8 273.137 -13.813 -14.951 1 73.82 ? C1 TLA 919 B 1 
HETATM 4 C C2 TLA . . . R 8 272.341 -15.037 -15.307 1 75.74 ? C2 TLA 919 B 1 
HETATM 5 O O2 TLA . . . R 8 271.54 -14.792 -16.472 1 72.96 ? O2 TLA 919 B 1 
HETATM 6 C C3 TLA . . . R 8 271.498 -15.48 -14.104 1 79.87 ? C3 TLA 919 B 1 
HETATM 7 O O3 TLA . . . R 8 270.793 -14.351 -13.561 1 81.35 ? O3 TLA 919 B 1 
HETATM 8 C C4 TLA . . . R 8 270.529 -16.576 -14.47 1 82.25 ? C4 TLA 919 B 1 
HETATM 9 O O4 TLA . . . R 8 269.303 -16.321 -14.505 1 82.1 ? O4 TLA 919 B 1 
HETATM 10 O O41 TLA . . . R 8 270.979 -17.718 -14.718 1 83.16 ? O41 TLA 919 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           10 
#