data_4KIL # _model_server_result.job_id zIj7WlMEvQ_mhgXSTVN3aw _model_server_result.datetime_utc '2024-11-14 02:52:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4kil # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 4KIL # _exptl.entry_id 4KIL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4KIL _cell.length_a 88.699 _cell.length_b 100.868 _cell.length_c 66.441 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4KIL _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 50 A HIS 41 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc2 A OE1 GLU 89 A GLU 80 1_555 C MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc3 A OD2 ASP 117 A ASP 108 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc4 A OD1 ASP 117 A ASP 108 1_555 C MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc5 A OE2 GLU 128 A GLU 119 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc6 A O ILE 129 A ILE 120 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc7 B MN MN . A MN 301 1_555 F O1 1R5 . A 1R5 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc8 B MN MN . A MN 301 1_555 F O 1R5 . A 1R5 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc9 C MN MN . A MN 302 1_555 F O 1R5 . A 1R5 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc10 C MN MN . A MN 302 1_555 G O HOH . A HOH 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc11 C MN MN . A MN 302 1_555 G O HOH . A HOH 464 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc12 C MN MN . A MN 302 1_555 G O HOH . A HOH 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4KIL _atom_sites.fract_transf_matrix[1][1] 0.011274 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009914 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015051 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 301 301 MN MN . C 2 MN A 1 302 302 MN MN . D 3 SO4 A 1 303 3 SO4 SO4 . E 4 EDO A 1 304 1 EDO EDO . F 5 1R5 A 1 305 1 1R5 1R5 . G 6 HOH A 1 401 1 HOH HOH . G 6 HOH A 2 402 2 HOH HOH . G 6 HOH A 3 403 3 HOH HOH . G 6 HOH A 4 404 4 HOH HOH . G 6 HOH A 5 405 5 HOH HOH . G 6 HOH A 6 406 6 HOH HOH . G 6 HOH A 7 407 7 HOH HOH . G 6 HOH A 8 408 8 HOH HOH . G 6 HOH A 9 409 9 HOH HOH . G 6 HOH A 10 410 10 HOH HOH . G 6 HOH A 11 411 11 HOH HOH . G 6 HOH A 12 412 12 HOH HOH . G 6 HOH A 13 413 13 HOH HOH . G 6 HOH A 14 414 14 HOH HOH . G 6 HOH A 15 415 15 HOH HOH . G 6 HOH A 16 416 16 HOH HOH . G 6 HOH A 17 417 17 HOH HOH . G 6 HOH A 18 418 18 HOH HOH . G 6 HOH A 19 419 19 HOH HOH . G 6 HOH A 20 420 20 HOH HOH . G 6 HOH A 21 421 21 HOH HOH . G 6 HOH A 22 422 22 HOH HOH . G 6 HOH A 23 423 23 HOH HOH . G 6 HOH A 24 424 24 HOH HOH . G 6 HOH A 25 425 25 HOH HOH . G 6 HOH A 26 426 26 HOH HOH . G 6 HOH A 27 427 27 HOH HOH . G 6 HOH A 28 428 28 HOH HOH . G 6 HOH A 29 429 29 HOH HOH . G 6 HOH A 30 430 30 HOH HOH . G 6 HOH A 31 431 31 HOH HOH . G 6 HOH A 32 432 32 HOH HOH . G 6 HOH A 33 433 33 HOH HOH . G 6 HOH A 34 434 34 HOH HOH . G 6 HOH A 35 435 35 HOH HOH . G 6 HOH A 36 436 36 HOH HOH . G 6 HOH A 37 437 37 HOH HOH . G 6 HOH A 38 438 38 HOH HOH . G 6 HOH A 39 439 39 HOH HOH . G 6 HOH A 40 440 40 HOH HOH . G 6 HOH A 41 441 41 HOH HOH . G 6 HOH A 42 442 42 HOH HOH . G 6 HOH A 43 443 43 HOH HOH . G 6 HOH A 44 444 44 HOH HOH . G 6 HOH A 45 445 45 HOH HOH . G 6 HOH A 46 446 46 HOH HOH . G 6 HOH A 47 447 47 HOH HOH . G 6 HOH A 48 448 48 HOH HOH . G 6 HOH A 49 449 49 HOH HOH . G 6 HOH A 50 450 50 HOH HOH . G 6 HOH A 51 451 51 HOH HOH . G 6 HOH A 52 452 52 HOH HOH . G 6 HOH A 53 453 53 HOH HOH . G 6 HOH A 54 454 54 HOH HOH . G 6 HOH A 55 455 55 HOH HOH . G 6 HOH A 56 456 56 HOH HOH . G 6 HOH A 57 457 57 HOH HOH . G 6 HOH A 58 458 58 HOH HOH . G 6 HOH A 59 459 59 HOH HOH . G 6 HOH A 60 460 60 HOH HOH . G 6 HOH A 61 461 61 HOH HOH . G 6 HOH A 62 462 62 HOH HOH . G 6 HOH A 63 463 63 HOH HOH . G 6 HOH A 64 464 64 HOH HOH . G 6 HOH A 65 465 65 HOH HOH . G 6 HOH A 66 466 66 HOH HOH . G 6 HOH A 67 467 67 HOH HOH . G 6 HOH A 68 468 68 HOH HOH . G 6 HOH A 69 469 69 HOH HOH . G 6 HOH A 70 470 70 HOH HOH . G 6 HOH A 71 471 71 HOH HOH . G 6 HOH A 72 472 72 HOH HOH . G 6 HOH A 73 473 73 HOH HOH . G 6 HOH A 74 474 74 HOH HOH . G 6 HOH A 75 475 75 HOH HOH . G 6 HOH A 76 476 76 HOH HOH . G 6 HOH A 77 477 77 HOH HOH . G 6 HOH A 78 478 78 HOH HOH . G 6 HOH A 79 479 79 HOH HOH . G 6 HOH A 80 480 80 HOH HOH . G 6 HOH A 81 481 81 HOH HOH . G 6 HOH A 82 482 82 HOH HOH . G 6 HOH A 83 483 83 HOH HOH . G 6 HOH A 84 484 84 HOH HOH . G 6 HOH A 85 485 85 HOH HOH . G 6 HOH A 86 486 86 HOH HOH . G 6 HOH A 87 487 87 HOH HOH . G 6 HOH A 88 488 88 HOH HOH . G 6 HOH A 89 489 89 HOH HOH . G 6 HOH A 90 490 90 HOH HOH . G 6 HOH A 91 491 91 HOH HOH . G 6 HOH A 92 492 92 HOH HOH . G 6 HOH A 93 493 93 HOH HOH . G 6 HOH A 94 494 94 HOH HOH . G 6 HOH A 95 495 95 HOH HOH . G 6 HOH A 96 496 96 HOH HOH . G 6 HOH A 97 497 97 HOH HOH . G 6 HOH A 98 498 98 HOH HOH . G 6 HOH A 99 499 99 HOH HOH . G 6 HOH A 100 500 100 HOH HOH . G 6 HOH A 101 501 101 HOH HOH . G 6 HOH A 102 502 102 HOH HOH . G 6 HOH A 103 503 103 HOH HOH . G 6 HOH A 104 504 104 HOH HOH . G 6 HOH A 105 505 105 HOH HOH . G 6 HOH A 106 506 106 HOH HOH . G 6 HOH A 107 507 108 HOH HOH . G 6 HOH A 108 508 109 HOH HOH . G 6 HOH A 109 509 110 HOH HOH . G 6 HOH A 110 510 111 HOH HOH . G 6 HOH A 111 511 112 HOH HOH . G 6 HOH A 112 512 113 HOH HOH . G 6 HOH A 113 513 114 HOH HOH . G 6 HOH A 114 514 115 HOH HOH . G 6 HOH A 115 515 117 HOH HOH . G 6 HOH A 116 516 118 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 8.219 _atom_site.Cartn_y 18.021 _atom_site.Cartn_z -8.794 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 50.08 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #