data_4KKY # _model_server_result.job_id aU6EpRcXR1yvqvsCJw5Rkg _model_server_result.datetime_utc '2024-11-08 12:41:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4kky # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 4KKY # _exptl.entry_id 4KKY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 152.233 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CAMPHOR _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.73 _cell.angle_gamma 90 _cell.entry_id 4KKY _cell.length_a 35.95 _cell.length_b 101.99 _cell.length_c 57.35 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4KKY _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 113 X CYS 113 1_555 C C19 1T4 . X 1T4 502 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc1 A O GLU 84 X GLU 84 1_555 E K K . X K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? metalc ? metalc2 A O GLY 93 X GLY 93 1_555 E K K . X K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.821 ? metalc ? metalc3 A O GLU 94 X GLU 94 1_555 E K K . X K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.831 ? metalc ? metalc4 A O TYR 96 X TYR 96 1_555 E K K . X K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.754 ? metalc ? metalc5 A SG CYS 357 X CYS 357 1_555 B FE HEM . X HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? # _chem_comp.formula 'C10 H16 O' _chem_comp.formula_weight 152.233 _chem_comp.id CAM _chem_comp.mon_nstd_flag . _chem_comp.name CAMPHOR _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CAM sing 106 n n C1 C6 CAM sing 107 n n C1 C7 CAM sing 108 n n C1 C10 CAM sing 109 n n C2 O CAM doub 110 n n C2 C3 CAM sing 111 n n C3 C4 CAM sing 112 n n C3 H31 CAM sing 113 n n C3 H32 CAM sing 114 n n C4 C5 CAM sing 115 n n C4 C7 CAM sing 116 n n C4 H4 CAM sing 117 n n C5 C6 CAM sing 118 n n C5 H51 CAM sing 119 n n C5 H52 CAM sing 120 n n C6 H61 CAM sing 121 n n C6 H62 CAM sing 122 n n C7 C8 CAM sing 123 n n C7 C9 CAM sing 124 n n C8 H81 CAM sing 125 n n C8 H82 CAM sing 126 n n C8 H83 CAM sing 127 n n C9 H91 CAM sing 128 n n C9 H92 CAM sing 129 n n C9 H93 CAM sing 130 n n C10 H101 CAM sing 131 n n C10 H102 CAM sing 132 n n C10 H103 CAM sing 133 n n # _atom_sites.entry_id 4KKY _atom_sites.fract_transf_matrix[1][1] 0.027816 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005776 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009805 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017809 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM X 1 501 417 HEM HEM . C 3 1T4 X 1 502 418 1T4 PIA . D 4 CAM X 1 503 1 CAM CAM . E 5 K X 1 504 1 K K . F 5 K X 1 505 1 K K . G 6 HOH X 1 601 1 HOH HOH . G 6 HOH X 2 602 2 HOH HOH . G 6 HOH X 3 603 3 HOH HOH . G 6 HOH X 4 604 4 HOH HOH . G 6 HOH X 5 605 5 HOH HOH . G 6 HOH X 6 606 6 HOH HOH . G 6 HOH X 7 607 7 HOH HOH . G 6 HOH X 8 608 8 HOH HOH . G 6 HOH X 9 609 9 HOH HOH . G 6 HOH X 10 610 10 HOH HOH . G 6 HOH X 11 611 11 HOH HOH . G 6 HOH X 12 612 12 HOH HOH . G 6 HOH X 13 613 13 HOH HOH . G 6 HOH X 14 614 14 HOH HOH . G 6 HOH X 15 615 15 HOH HOH . G 6 HOH X 16 616 17 HOH HOH . G 6 HOH X 17 617 18 HOH HOH . G 6 HOH X 18 618 19 HOH HOH . G 6 HOH X 19 619 20 HOH HOH . G 6 HOH X 20 620 21 HOH HOH . G 6 HOH X 21 621 22 HOH HOH . G 6 HOH X 22 622 23 HOH HOH . G 6 HOH X 23 623 24 HOH HOH . G 6 HOH X 24 624 25 HOH HOH . G 6 HOH X 25 625 26 HOH HOH . G 6 HOH X 26 626 27 HOH HOH . G 6 HOH X 27 627 28 HOH HOH . G 6 HOH X 28 628 29 HOH HOH . G 6 HOH X 29 629 30 HOH HOH . G 6 HOH X 30 630 31 HOH HOH . G 6 HOH X 31 631 32 HOH HOH . G 6 HOH X 32 632 33 HOH HOH . G 6 HOH X 33 633 34 HOH HOH . G 6 HOH X 34 634 35 HOH HOH . G 6 HOH X 35 635 36 HOH HOH . G 6 HOH X 36 636 37 HOH HOH . G 6 HOH X 37 637 38 HOH HOH . G 6 HOH X 38 638 39 HOH HOH . G 6 HOH X 39 639 40 HOH HOH . G 6 HOH X 40 640 41 HOH HOH . G 6 HOH X 41 641 42 HOH HOH . G 6 HOH X 42 642 43 HOH HOH . G 6 HOH X 43 643 44 HOH HOH . G 6 HOH X 44 644 45 HOH HOH . G 6 HOH X 45 645 46 HOH HOH . G 6 HOH X 46 646 47 HOH HOH . G 6 HOH X 47 647 48 HOH HOH . G 6 HOH X 48 648 49 HOH HOH . G 6 HOH X 49 649 50 HOH HOH . G 6 HOH X 50 650 51 HOH HOH . G 6 HOH X 51 651 52 HOH HOH . G 6 HOH X 52 652 53 HOH HOH . G 6 HOH X 53 653 55 HOH HOH . G 6 HOH X 54 654 56 HOH HOH . G 6 HOH X 55 655 57 HOH HOH . G 6 HOH X 56 656 58 HOH HOH . G 6 HOH X 57 657 59 HOH HOH . G 6 HOH X 58 658 60 HOH HOH . G 6 HOH X 59 659 61 HOH HOH . G 6 HOH X 60 660 62 HOH HOH . G 6 HOH X 61 661 63 HOH HOH . G 6 HOH X 62 662 64 HOH HOH . G 6 HOH X 63 663 65 HOH HOH . G 6 HOH X 64 664 67 HOH HOH . G 6 HOH X 65 665 68 HOH HOH . G 6 HOH X 66 666 69 HOH HOH . G 6 HOH X 67 667 70 HOH HOH . G 6 HOH X 68 668 71 HOH HOH . G 6 HOH X 69 669 72 HOH HOH . G 6 HOH X 70 670 74 HOH HOH . G 6 HOH X 71 671 75 HOH HOH . G 6 HOH X 72 672 76 HOH HOH . G 6 HOH X 73 673 77 HOH HOH . G 6 HOH X 74 674 79 HOH HOH . G 6 HOH X 75 675 80 HOH HOH . G 6 HOH X 76 676 81 HOH HOH . G 6 HOH X 77 677 82 HOH HOH . G 6 HOH X 78 678 83 HOH HOH . G 6 HOH X 79 679 84 HOH HOH . G 6 HOH X 80 680 85 HOH HOH . G 6 HOH X 81 681 86 HOH HOH . G 6 HOH X 82 682 87 HOH HOH . G 6 HOH X 83 683 88 HOH HOH . G 6 HOH X 84 684 90 HOH HOH . G 6 HOH X 85 685 91 HOH HOH . G 6 HOH X 86 686 92 HOH HOH . G 6 HOH X 87 687 93 HOH HOH . G 6 HOH X 88 688 95 HOH HOH . G 6 HOH X 89 689 96 HOH HOH . G 6 HOH X 90 690 97 HOH HOH . G 6 HOH X 91 691 98 HOH HOH . G 6 HOH X 92 692 99 HOH HOH . G 6 HOH X 93 693 100 HOH HOH . G 6 HOH X 94 694 101 HOH HOH . G 6 HOH X 95 695 104 HOH HOH . G 6 HOH X 96 696 107 HOH HOH . G 6 HOH X 97 697 108 HOH HOH . G 6 HOH X 98 698 109 HOH HOH . G 6 HOH X 99 699 110 HOH HOH . G 6 HOH X 100 700 111 HOH HOH . G 6 HOH X 101 701 113 HOH HOH . G 6 HOH X 102 702 114 HOH HOH . G 6 HOH X 103 703 117 HOH HOH . G 6 HOH X 104 704 118 HOH HOH . G 6 HOH X 105 705 119 HOH HOH . G 6 HOH X 106 706 120 HOH HOH . G 6 HOH X 107 707 121 HOH HOH . G 6 HOH X 108 708 123 HOH HOH . G 6 HOH X 109 709 124 HOH HOH . G 6 HOH X 110 710 126 HOH HOH . G 6 HOH X 111 711 127 HOH HOH . G 6 HOH X 112 712 128 HOH HOH . G 6 HOH X 113 713 129 HOH HOH . G 6 HOH X 114 714 130 HOH HOH . G 6 HOH X 115 715 133 HOH HOH . G 6 HOH X 116 716 134 HOH HOH . G 6 HOH X 117 717 135 HOH HOH . G 6 HOH X 118 718 136 HOH HOH . G 6 HOH X 119 719 137 HOH HOH . G 6 HOH X 120 720 138 HOH HOH . G 6 HOH X 121 721 139 HOH HOH . G 6 HOH X 122 722 140 HOH HOH . G 6 HOH X 123 723 141 HOH HOH . G 6 HOH X 124 724 142 HOH HOH . G 6 HOH X 125 725 143 HOH HOH . G 6 HOH X 126 726 144 HOH HOH . G 6 HOH X 127 727 145 HOH HOH . G 6 HOH X 128 728 147 HOH HOH . G 6 HOH X 129 729 148 HOH HOH . G 6 HOH X 130 730 149 HOH HOH . G 6 HOH X 131 731 150 HOH HOH . G 6 HOH X 132 732 151 HOH HOH . G 6 HOH X 133 733 152 HOH HOH . G 6 HOH X 134 734 153 HOH HOH . G 6 HOH X 135 735 154 HOH HOH . G 6 HOH X 136 736 156 HOH HOH . G 6 HOH X 137 737 157 HOH HOH . G 6 HOH X 138 738 159 HOH HOH . G 6 HOH X 139 739 160 HOH HOH . G 6 HOH X 140 740 161 HOH HOH . G 6 HOH X 141 741 162 HOH HOH . G 6 HOH X 142 742 163 HOH HOH . G 6 HOH X 143 743 164 HOH HOH . G 6 HOH X 144 744 165 HOH HOH . G 6 HOH X 145 745 166 HOH HOH . G 6 HOH X 146 746 167 HOH HOH . G 6 HOH X 147 747 168 HOH HOH . G 6 HOH X 148 748 169 HOH HOH . G 6 HOH X 149 749 170 HOH HOH . G 6 HOH X 150 750 171 HOH HOH . G 6 HOH X 151 751 172 HOH HOH . G 6 HOH X 152 752 174 HOH HOH . G 6 HOH X 153 753 175 HOH HOH . G 6 HOH X 154 754 176 HOH HOH . G 6 HOH X 155 755 178 HOH HOH . G 6 HOH X 156 756 179 HOH HOH . G 6 HOH X 157 757 180 HOH HOH . G 6 HOH X 158 758 182 HOH HOH . G 6 HOH X 159 759 183 HOH HOH . G 6 HOH X 160 760 184 HOH HOH . G 6 HOH X 161 761 185 HOH HOH . G 6 HOH X 162 762 187 HOH HOH . G 6 HOH X 163 763 188 HOH HOH . G 6 HOH X 164 764 189 HOH HOH . G 6 HOH X 165 765 191 HOH HOH . G 6 HOH X 166 766 192 HOH HOH . G 6 HOH X 167 767 193 HOH HOH . G 6 HOH X 168 768 194 HOH HOH . G 6 HOH X 169 769 195 HOH HOH . G 6 HOH X 170 770 196 HOH HOH . G 6 HOH X 171 771 197 HOH HOH . G 6 HOH X 172 772 199 HOH HOH . G 6 HOH X 173 773 200 HOH HOH . G 6 HOH X 174 774 201 HOH HOH . G 6 HOH X 175 775 206 HOH HOH . G 6 HOH X 176 776 207 HOH HOH . G 6 HOH X 177 777 208 HOH HOH . G 6 HOH X 178 778 209 HOH HOH . G 6 HOH X 179 779 210 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CAM . . . D 4 8.869 1.954 19.339 1 13.6 ? C1 CAM 503 X 1 HETATM 2 C C2 CAM . . . D 4 9.262 2.022 17.882 1 14.53 ? C2 CAM 503 X 1 HETATM 3 O O CAM . . . D 4 8.512 2.149 16.892 1 15.61 ? O CAM 503 X 1 HETATM 4 C C3 CAM . . . D 4 10.792 2.024 17.792 1 13.34 ? C3 CAM 503 X 1 HETATM 5 C C4 CAM . . . D 4 11.077 1.916 19.298 1 13.66 ? C4 CAM 503 X 1 HETATM 6 C C5 CAM . . . D 4 10.762 3.228 19.948 1 13.33 ? C5 CAM 503 X 1 HETATM 7 C C6 CAM . . . D 4 9.21 3.363 19.821 1 13.03 ? C6 CAM 503 X 1 HETATM 8 C C7 CAM . . . D 4 9.947 1.087 19.897 1 13 ? C7 CAM 503 X 1 HETATM 9 C C8 CAM . . . D 4 9.894 -0.369 19.366 1 13.24 ? C8 CAM 503 X 1 HETATM 10 C C9 CAM . . . D 4 9.929 1.091 21.457 1 13.18 ? C9 CAM 503 X 1 HETATM 11 C C10 CAM . . . D 4 7.429 1.531 19.696 1 12.67 ? C10 CAM 503 X 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 11 #