data_4KLN # _model_server_result.job_id jpPAUxHwHLwcAQp-vhOTsQ _model_server_result.datetime_utc '2024-12-04 06:55:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4kln # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":801}' # _entry.id 4KLN # _exptl.entry_id 4KLN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 98.11 _cell.angle_beta 90.55 _cell.angle_gamma 92.72 _cell.entry_id 4KLN _cell.length_a 91.147 _cell.length_b 104.514 _cell.length_c 109.528 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4KLN _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 J N N ? 3 L N N ? 3 N N N ? 3 P N N ? 3 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 252 A THR 252 1_555 H MG MG . A MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc2 G O2G AGS . A AGS 800 1_555 H MG MG . A MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc3 G O1B AGS . A AGS 800 1_555 H MG MG . A MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc4 H MG MG . A MG 801 1_555 S O HOH . A HOH 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc5 H MG MG . A MG 801 1_555 S O HOH . A HOH 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.879 ? metalc ? metalc6 H MG MG . A MG 801 1_555 S O HOH . A HOH 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.961 ? metalc ? metalc7 B OG1 THR 252 B THR 252 1_555 J MG MG . B MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc8 I O2G AGS . B AGS 800 1_555 J MG MG . B MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? metalc ? metalc9 I O1B AGS . B AGS 800 1_555 J MG MG . B MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? metalc ? metalc10 J MG MG . B MG 801 1_555 T O HOH . B HOH 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc11 J MG MG . B MG 801 1_555 T O HOH . B HOH 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.917 ? metalc ? metalc12 J MG MG . B MG 801 1_555 T O HOH . B HOH 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc13 C OG1 THR 252 C THR 252 1_555 L MG MG . C MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc14 K O2G AGS . C AGS 800 1_555 L MG MG . C MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc15 K O1B AGS . C AGS 800 1_555 L MG MG . C MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc16 L MG MG . C MG 801 1_555 U O HOH . C HOH 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc17 L MG MG . C MG 801 1_555 U O HOH . C HOH 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.934 ? metalc ? metalc18 L MG MG . C MG 801 1_555 U O HOH . C HOH 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc19 D OG1 THR 252 D THR 252 1_555 N MG MG . D MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc20 M O2G AGS . D AGS 800 1_555 N MG MG . D MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? metalc ? metalc21 M O1B AGS . D AGS 800 1_555 N MG MG . D MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc22 N MG MG . D MG 801 1_555 V O HOH . D HOH 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc23 N MG MG . D MG 801 1_555 V O HOH . D HOH 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.927 ? metalc ? metalc24 N MG MG . D MG 801 1_555 V O HOH . D HOH 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc25 E OG1 THR 252 E THR 252 1_555 P MG MG . E MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc26 O O2G AGS . E AGS 800 1_555 P MG MG . E MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? metalc ? metalc27 O O1B AGS . E AGS 800 1_555 P MG MG . E MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc28 P MG MG . E MG 801 1_555 W O HOH . E HOH 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc29 P MG MG . E MG 801 1_555 W O HOH . E HOH 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.953 ? metalc ? metalc30 P MG MG . E MG 801 1_555 W O HOH . E HOH 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc31 F OG1 THR 252 F THR 252 1_555 R MG MG . F MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc32 Q O2G AGS . F AGS 800 1_555 R MG MG . F MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc33 Q O1B AGS . F AGS 800 1_555 R MG MG . F MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc34 R MG MG . F MG 801 1_555 X O HOH . F HOH 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc35 R MG MG . F MG 801 1_555 X O HOH . F HOH 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? metalc ? metalc36 R MG MG . F MG 801 1_555 X O HOH . F HOH 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.916 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4KLN _atom_sites.fract_transf_matrix[1][1] 0.010971 _atom_sites.fract_transf_matrix[1][2] 0.000521 _atom_sites.fract_transf_matrix[1][3] 0.000181 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009579 _atom_sites.fract_transf_matrix[2][3] 0.001371 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009224 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 AGS A 1 800 800 AGS AGS . H 3 MG A 1 801 801 MG MG . I 2 AGS B 1 800 800 AGS AGS . J 3 MG B 1 801 801 MG MG . K 2 AGS C 1 800 800 AGS AGS . L 3 MG C 1 801 801 MG MG . M 2 AGS D 1 800 800 AGS AGS . N 3 MG D 1 801 801 MG MG . O 2 AGS E 1 800 800 AGS AGS . P 3 MG E 1 801 801 MG MG . Q 2 AGS F 1 800 800 AGS AGS . R 3 MG F 1 801 801 MG MG . S 4 HOH A 1 901 802 HOH HOH . S 4 HOH A 2 902 803 HOH HOH . S 4 HOH A 3 903 804 HOH HOH . S 4 HOH A 4 904 22 HOH HOH . S 4 HOH A 5 905 31 HOH HOH . S 4 HOH A 6 906 32 HOH HOH . S 4 HOH A 7 907 33 HOH HOH . S 4 HOH A 8 908 40 HOH HOH . S 4 HOH A 9 909 41 HOH HOH . S 4 HOH A 10 910 43 HOH HOH . S 4 HOH A 11 911 45 HOH HOH . S 4 HOH A 12 912 56 HOH HOH . S 4 HOH A 13 913 58 HOH HOH . S 4 HOH A 14 914 76 HOH HOH . S 4 HOH A 15 915 77 HOH HOH . S 4 HOH A 16 916 84 HOH HOH . S 4 HOH A 17 917 101 HOH HOH . S 4 HOH A 18 918 102 HOH HOH . S 4 HOH A 19 919 114 HOH HOH . S 4 HOH A 20 920 116 HOH HOH . S 4 HOH A 21 921 117 HOH HOH . S 4 HOH A 22 922 121 HOH HOH . S 4 HOH A 23 923 131 HOH HOH . S 4 HOH A 24 924 132 HOH HOH . S 4 HOH A 25 925 133 HOH HOH . S 4 HOH A 26 926 139 HOH HOH . S 4 HOH A 27 927 140 HOH HOH . S 4 HOH A 28 928 141 HOH HOH . S 4 HOH A 29 929 142 HOH HOH . S 4 HOH A 30 930 149 HOH HOH . S 4 HOH A 31 931 152 HOH HOH . S 4 HOH A 32 932 156 HOH HOH . S 4 HOH A 33 933 202 HOH HOH . T 4 HOH B 1 901 802 HOH HOH . T 4 HOH B 2 902 803 HOH HOH . T 4 HOH B 3 903 804 HOH HOH . T 4 HOH B 4 904 6 HOH HOH . T 4 HOH B 5 905 7 HOH HOH . T 4 HOH B 6 906 34 HOH HOH . T 4 HOH B 7 907 39 HOH HOH . T 4 HOH B 8 908 47 HOH HOH . T 4 HOH B 9 909 61 HOH HOH . T 4 HOH B 10 910 78 HOH HOH . T 4 HOH B 11 911 88 HOH HOH . T 4 HOH B 12 912 91 HOH HOH . T 4 HOH B 13 913 93 HOH HOH . T 4 HOH B 14 914 96 HOH HOH . T 4 HOH B 15 915 97 HOH HOH . T 4 HOH B 16 916 99 HOH HOH . T 4 HOH B 17 917 137 HOH HOH . T 4 HOH B 18 918 153 HOH HOH . T 4 HOH B 19 919 160 HOH HOH . T 4 HOH B 20 920 161 HOH HOH . T 4 HOH B 21 921 162 HOH HOH . T 4 HOH B 22 922 164 HOH HOH . T 4 HOH B 23 923 167 HOH HOH . T 4 HOH B 24 924 168 HOH HOH . T 4 HOH B 25 925 169 HOH HOH . T 4 HOH B 26 926 170 HOH HOH . T 4 HOH B 27 927 172 HOH HOH . T 4 HOH B 28 928 199 HOH HOH . U 4 HOH C 1 901 802 HOH HOH . U 4 HOH C 2 902 803 HOH HOH . U 4 HOH C 3 903 804 HOH HOH . U 4 HOH C 4 904 8 HOH HOH . U 4 HOH C 5 905 9 HOH HOH . U 4 HOH C 6 906 10 HOH HOH . U 4 HOH C 7 907 27 HOH HOH . U 4 HOH C 8 908 48 HOH HOH . U 4 HOH C 9 909 50 HOH HOH . U 4 HOH C 10 910 63 HOH HOH . U 4 HOH C 11 911 65 HOH HOH . U 4 HOH C 12 912 66 HOH HOH . U 4 HOH C 13 913 89 HOH HOH . U 4 HOH C 14 914 98 HOH HOH . U 4 HOH C 15 915 104 HOH HOH . U 4 HOH C 16 916 105 HOH HOH . U 4 HOH C 17 917 145 HOH HOH . U 4 HOH C 18 918 171 HOH HOH . U 4 HOH C 19 919 175 HOH HOH . U 4 HOH C 20 920 176 HOH HOH . U 4 HOH C 21 921 177 HOH HOH . U 4 HOH C 22 922 178 HOH HOH . U 4 HOH C 23 923 179 HOH HOH . U 4 HOH C 24 924 180 HOH HOH . U 4 HOH C 25 925 181 HOH HOH . U 4 HOH C 26 926 184 HOH HOH . U 4 HOH C 27 927 185 HOH HOH . U 4 HOH C 28 928 186 HOH HOH . U 4 HOH C 29 929 187 HOH HOH . U 4 HOH C 30 930 198 HOH HOH . V 4 HOH D 1 901 802 HOH HOH . V 4 HOH D 2 902 803 HOH HOH . V 4 HOH D 3 903 804 HOH HOH . V 4 HOH D 4 904 14 HOH HOH . V 4 HOH D 5 905 68 HOH HOH . V 4 HOH D 6 906 70 HOH HOH . V 4 HOH D 7 907 80 HOH HOH . V 4 HOH D 8 908 86 HOH HOH . V 4 HOH D 9 909 90 HOH HOH . V 4 HOH D 10 910 92 HOH HOH . V 4 HOH D 11 911 106 HOH HOH . V 4 HOH D 12 912 107 HOH HOH . V 4 HOH D 13 913 146 HOH HOH . V 4 HOH D 14 914 147 HOH HOH . V 4 HOH D 15 915 154 HOH HOH . V 4 HOH D 16 916 157 HOH HOH . V 4 HOH D 17 917 188 HOH HOH . V 4 HOH D 18 918 189 HOH HOH . V 4 HOH D 19 919 190 HOH HOH . V 4 HOH D 20 920 191 HOH HOH . V 4 HOH D 21 921 192 HOH HOH . V 4 HOH D 22 922 193 HOH HOH . V 4 HOH D 23 923 194 HOH HOH . V 4 HOH D 24 924 196 HOH HOH . V 4 HOH D 25 925 197 HOH HOH . V 4 HOH D 26 926 200 HOH HOH . W 4 HOH E 1 901 802 HOH HOH . W 4 HOH E 2 902 803 HOH HOH . W 4 HOH E 3 903 804 HOH HOH . W 4 HOH E 4 904 17 HOH HOH . W 4 HOH E 5 905 19 HOH HOH . W 4 HOH E 6 906 37 HOH HOH . W 4 HOH E 7 907 71 HOH HOH . W 4 HOH E 8 908 81 HOH HOH . W 4 HOH E 9 909 82 HOH HOH . W 4 HOH E 10 910 83 HOH HOH . W 4 HOH E 11 911 95 HOH HOH . W 4 HOH E 12 912 100 HOH HOH . W 4 HOH E 13 913 108 HOH HOH . W 4 HOH E 14 914 134 HOH HOH . W 4 HOH E 15 915 135 HOH HOH . W 4 HOH E 16 916 155 HOH HOH . W 4 HOH E 17 917 158 HOH HOH . W 4 HOH E 18 918 201 HOH HOH . W 4 HOH E 19 919 203 HOH HOH . W 4 HOH E 20 920 204 HOH HOH . W 4 HOH E 21 921 205 HOH HOH . W 4 HOH E 22 922 206 HOH HOH . W 4 HOH E 23 923 208 HOH HOH . W 4 HOH E 24 924 210 HOH HOH . W 4 HOH E 25 925 211 HOH HOH . X 4 HOH F 1 901 802 HOH HOH . X 4 HOH F 2 902 803 HOH HOH . X 4 HOH F 3 903 804 HOH HOH . X 4 HOH F 4 904 21 HOH HOH . X 4 HOH F 5 905 30 HOH HOH . X 4 HOH F 6 906 42 HOH HOH . X 4 HOH F 7 907 55 HOH HOH . X 4 HOH F 8 908 74 HOH HOH . X 4 HOH F 9 909 75 HOH HOH . X 4 HOH F 10 910 85 HOH HOH . X 4 HOH F 11 911 110 HOH HOH . X 4 HOH F 12 912 113 HOH HOH . X 4 HOH F 13 913 124 HOH HOH . X 4 HOH F 14 914 130 HOH HOH . X 4 HOH F 15 915 151 HOH HOH . X 4 HOH F 16 916 159 HOH HOH . X 4 HOH F 17 917 212 HOH HOH . X 4 HOH F 18 918 213 HOH HOH . X 4 HOH F 19 919 215 HOH HOH . X 4 HOH F 20 920 216 HOH HOH . X 4 HOH F 21 921 217 HOH HOH . X 4 HOH F 22 922 218 HOH HOH . X 4 HOH F 23 923 220 HOH HOH . X 4 HOH F 24 924 221 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 3 _atom_site.Cartn_x 8.071 _atom_site.Cartn_y 46.568 _atom_site.Cartn_z -4.975 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 12.53 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 801 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #