data_4KMM
#
_model_server_result.job_id            ZmUjTXfCtsKoJ2sf3jQIsQ 
_model_server_result.datetime_utc      '2024-11-20 04:26:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4kmm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":503}' 
#
_entry.id    4KMM 
#
_exptl.entry_id    4KMM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              408.571 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLIC ACID' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4KMM 
_cell.length_a            88.138 
_cell.length_b            93.418 
_cell.length_c            110.219 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4KMM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 J N N 
? 4 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 143 A CYS 196 1_555 D FE2 FES . A FES 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? 
metalc ? metalc2 A SG CYS 350 A CYS 403 1_555 D FE2 FES . A FES 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc3 A SG CYS 353 A CYS 406 1_555 D FE1 FES . A FES 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? 
metalc ? metalc4 A SG CYS 358 A CYS 411 1_555 D FE1 FES . A FES 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? 
metalc ? metalc5 B SG CYS 143 B CYS 196 1_555 I FE2 FES . B FES 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? 
metalc ? metalc6 B SG CYS 350 B CYS 403 1_555 I FE2 FES . B FES 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? 
metalc ? metalc7 B SG CYS 353 B CYS 406 1_555 I FE1 FES . B FES 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? 
metalc ? metalc8 B SG CYS 358 B CYS 411 1_555 I FE1 FES . B FES 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? 
#
_chem_comp.formula           'C24 H40 O5' 
_chem_comp.formula_weight    408.571 
_chem_comp.id                CHD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 CHD sing 70 n n 
C1 C10 CHD sing 71 n n 
C1 H11 CHD sing 72 n n 
C1 H12A CHD sing 73 n n 
C2 C3 CHD sing 74 n n 
C2 H21 CHD sing 75 n n 
C2 H22 CHD sing 76 n n 
C3 O3 CHD sing 77 n n 
C3 C4 CHD sing 78 n n 
C3 H3 CHD sing 79 n n 
O3 HO3 CHD sing 80 n n 
C4 C5 CHD sing 81 n n 
C4 H41 CHD sing 82 n n 
C4 H42 CHD sing 83 n n 
C5 C6 CHD sing 84 n n 
C5 C10 CHD sing 85 n n 
C5 H5 CHD sing 86 n n 
C6 C7 CHD sing 87 n n 
C6 H61 CHD sing 88 n n 
C6 H62 CHD sing 89 n n 
C7 O7 CHD sing 90 n n 
C7 C8 CHD sing 91 n n 
C7 H7 CHD sing 92 n n 
O7 HO7 CHD sing 93 n n 
C8 C9 CHD sing 94 n n 
C8 C14 CHD sing 95 n n 
C8 H8 CHD sing 96 n n 
C9 C10 CHD sing 97 n n 
C9 C11 CHD sing 98 n n 
C9 H9 CHD sing 99 n n 
C10 C19 CHD sing 100 n n 
C11 C12 CHD sing 101 n n 
C11 H111 CHD sing 102 n n 
C11 H112 CHD sing 103 n n 
C12 O12 CHD sing 104 n n 
C12 C13 CHD sing 105 n n 
C12 H12 CHD sing 106 n n 
O12 HO12 CHD sing 107 n n 
C13 C14 CHD sing 108 n n 
C13 C17 CHD sing 109 n n 
C13 C18 CHD sing 110 n n 
C14 C15 CHD sing 111 n n 
C14 H14 CHD sing 112 n n 
C15 C16 CHD sing 113 n n 
C15 H151 CHD sing 114 n n 
C15 H152 CHD sing 115 n n 
C16 C17 CHD sing 116 n n 
C16 H161 CHD sing 117 n n 
C16 H162 CHD sing 118 n n 
C17 C20 CHD sing 119 n n 
C17 H17 CHD sing 120 n n 
C18 H181 CHD sing 121 n n 
C18 H182 CHD sing 122 n n 
C18 H183 CHD sing 123 n n 
C19 H191 CHD sing 124 n n 
C19 H192 CHD sing 125 n n 
C19 H193 CHD sing 126 n n 
C20 C21 CHD sing 127 n n 
C20 C22 CHD sing 128 n n 
C20 H20 CHD sing 129 n n 
C21 H211 CHD sing 130 n n 
C21 H212 CHD sing 131 n n 
C21 H213 CHD sing 132 n n 
C22 C23 CHD sing 133 n n 
C22 H221 CHD sing 134 n n 
C22 H222 CHD sing 135 n n 
C23 C24 CHD sing 136 n n 
C23 H231 CHD sing 137 n n 
C23 H232 CHD sing 138 n n 
O25 C24 CHD doub 139 n n 
C24 O26 CHD sing 140 n n 
O26 H26 CHD sing 141 n n 
#
_atom_sites.entry_id                     4KMM 
_atom_sites.fract_transf_matrix[1][1]    0.011346 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010705 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009073 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEM A 1 501 1 HEM HEM . 
D 3 FES A 1 502 1 FES FES . 
E 4 CHD A 1 503 1 CHD CHD . 
F 4 CHD A 1 504 2 CHD CHD . 
G 5 CL A 1 505 1 CL CL . 
H 2 HEM B 1 501 2 HEM HEM . 
I 3 FES B 1 502 2 FES FES . 
J 4 CHD B 1 503 3 CHD CHD . 
K 4 CHD B 1 504 4 CHD CHD . 
L 5 CL B 1 505 2 CL CL . 
M 6 HOH A 1 601 1 HOH HOH . 
M 6 HOH A 2 602 2 HOH HOH . 
M 6 HOH A 3 603 3 HOH HOH . 
M 6 HOH A 4 604 4 HOH HOH . 
M 6 HOH A 5 605 5 HOH HOH . 
M 6 HOH A 6 606 6 HOH HOH . 
M 6 HOH A 7 607 7 HOH HOH . 
M 6 HOH A 8 608 8 HOH HOH . 
M 6 HOH A 9 609 9 HOH HOH . 
M 6 HOH A 10 610 10 HOH HOH . 
M 6 HOH A 11 611 11 HOH HOH . 
M 6 HOH A 12 612 13 HOH HOH . 
M 6 HOH A 13 613 15 HOH HOH . 
M 6 HOH A 14 614 16 HOH HOH . 
M 6 HOH A 15 615 17 HOH HOH . 
M 6 HOH A 16 616 18 HOH HOH . 
M 6 HOH A 17 617 19 HOH HOH . 
M 6 HOH A 18 618 30 HOH HOH . 
M 6 HOH A 19 619 31 HOH HOH . 
M 6 HOH A 20 620 32 HOH HOH . 
M 6 HOH A 21 621 33 HOH HOH . 
M 6 HOH A 22 622 34 HOH HOH . 
M 6 HOH A 23 623 35 HOH HOH . 
M 6 HOH A 24 624 36 HOH HOH . 
M 6 HOH A 25 625 37 HOH HOH . 
M 6 HOH A 26 626 38 HOH HOH . 
M 6 HOH A 27 627 39 HOH HOH . 
M 6 HOH A 28 628 40 HOH HOH . 
M 6 HOH A 29 629 41 HOH HOH . 
M 6 HOH A 30 630 42 HOH HOH . 
M 6 HOH A 31 631 43 HOH HOH . 
M 6 HOH A 32 632 44 HOH HOH . 
M 6 HOH A 33 633 45 HOH HOH . 
M 6 HOH A 34 634 46 HOH HOH . 
M 6 HOH A 35 635 57 HOH HOH . 
M 6 HOH A 36 636 60 HOH HOH . 
M 6 HOH A 37 637 65 HOH HOH . 
M 6 HOH A 38 638 66 HOH HOH . 
M 6 HOH A 39 639 67 HOH HOH . 
M 6 HOH A 40 640 68 HOH HOH . 
M 6 HOH A 41 641 69 HOH HOH . 
M 6 HOH A 42 642 70 HOH HOH . 
M 6 HOH A 43 643 71 HOH HOH . 
M 6 HOH A 44 644 72 HOH HOH . 
M 6 HOH A 45 645 77 HOH HOH . 
M 6 HOH A 46 646 79 HOH HOH . 
M 6 HOH A 47 647 81 HOH HOH . 
M 6 HOH A 48 648 84 HOH HOH . 
M 6 HOH A 49 649 85 HOH HOH . 
M 6 HOH A 50 650 89 HOH HOH . 
M 6 HOH A 51 651 94 HOH HOH . 
M 6 HOH A 52 652 95 HOH HOH . 
M 6 HOH A 53 653 97 HOH HOH . 
M 6 HOH A 54 654 99 HOH HOH . 
M 6 HOH A 55 655 102 HOH HOH . 
M 6 HOH A 56 656 103 HOH HOH . 
M 6 HOH A 57 657 107 HOH HOH . 
M 6 HOH A 58 658 108 HOH HOH . 
M 6 HOH A 59 659 109 HOH HOH . 
N 6 HOH B 1 601 12 HOH HOH . 
N 6 HOH B 2 602 14 HOH HOH . 
N 6 HOH B 3 603 20 HOH HOH . 
N 6 HOH B 4 604 21 HOH HOH . 
N 6 HOH B 5 605 22 HOH HOH . 
N 6 HOH B 6 606 23 HOH HOH . 
N 6 HOH B 7 607 24 HOH HOH . 
N 6 HOH B 8 608 25 HOH HOH . 
N 6 HOH B 9 609 26 HOH HOH . 
N 6 HOH B 10 610 27 HOH HOH . 
N 6 HOH B 11 611 28 HOH HOH . 
N 6 HOH B 12 612 29 HOH HOH . 
N 6 HOH B 13 613 47 HOH HOH . 
N 6 HOH B 14 614 48 HOH HOH . 
N 6 HOH B 15 615 49 HOH HOH . 
N 6 HOH B 16 616 50 HOH HOH . 
N 6 HOH B 17 617 51 HOH HOH . 
N 6 HOH B 18 618 52 HOH HOH . 
N 6 HOH B 19 619 53 HOH HOH . 
N 6 HOH B 20 620 54 HOH HOH . 
N 6 HOH B 21 621 55 HOH HOH . 
N 6 HOH B 22 622 56 HOH HOH . 
N 6 HOH B 23 623 58 HOH HOH . 
N 6 HOH B 24 624 59 HOH HOH . 
N 6 HOH B 25 625 61 HOH HOH . 
N 6 HOH B 26 626 62 HOH HOH . 
N 6 HOH B 27 627 63 HOH HOH . 
N 6 HOH B 28 628 64 HOH HOH . 
N 6 HOH B 29 629 73 HOH HOH . 
N 6 HOH B 30 630 74 HOH HOH . 
N 6 HOH B 31 631 75 HOH HOH . 
N 6 HOH B 32 632 76 HOH HOH . 
N 6 HOH B 33 633 78 HOH HOH . 
N 6 HOH B 34 634 80 HOH HOH . 
N 6 HOH B 35 635 82 HOH HOH . 
N 6 HOH B 36 636 83 HOH HOH . 
N 6 HOH B 37 637 86 HOH HOH . 
N 6 HOH B 38 638 87 HOH HOH . 
N 6 HOH B 39 639 88 HOH HOH . 
N 6 HOH B 40 640 90 HOH HOH . 
N 6 HOH B 41 641 91 HOH HOH . 
N 6 HOH B 42 642 92 HOH HOH . 
N 6 HOH B 43 643 93 HOH HOH . 
N 6 HOH B 44 644 96 HOH HOH . 
N 6 HOH B 45 645 98 HOH HOH . 
N 6 HOH B 46 646 100 HOH HOH . 
N 6 HOH B 47 647 101 HOH HOH . 
N 6 HOH B 48 648 104 HOH HOH . 
N 6 HOH B 49 649 105 HOH HOH . 
N 6 HOH B 50 650 106 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CHD . . . E 4 34.302 25.997 12.586 1 81.04 ? C1 CHD 503 A 1 
HETATM 2 C C2 CHD . . . E 4 33.274 25.382 11.645 1 81.25 ? C2 CHD 503 A 1 
HETATM 3 C C3 CHD . . . E 4 33.375 23.871 11.794 1 81.81 ? C3 CHD 503 A 1 
HETATM 4 O O3 CHD . . . E 4 32.352 23.245 10.992 1 82.39 ? O3 CHD 503 A 1 
HETATM 5 C C4 CHD . . . E 4 34.779 23.372 11.421 1 81.44 ? C4 CHD 503 A 1 
HETATM 6 C C5 CHD . . . E 4 35.981 24.31 11.654 1 81.6 ? C5 CHD 503 A 1 
HETATM 7 C C6 CHD . . . E 4 36.919 24.079 10.449 1 82.06 ? C6 CHD 503 A 1 
HETATM 8 C C7 CHD . . . E 4 37.129 25.241 9.469 1 82.18 ? C7 CHD 503 A 1 
HETATM 9 O O7 CHD . . . E 4 36.106 25.208 8.454 1 81.25 ? O7 CHD 503 A 1 
HETATM 10 C C8 CHD . . . E 4 37.22 26.594 10.195 1 82.7 ? C8 CHD 503 A 1 
HETATM 11 C C9 CHD . . . E 4 35.905 26.837 10.94 1 82.29 ? C9 CHD 503 A 1 
HETATM 12 C C10 CHD . . . E 4 35.713 25.795 12.053 1 81.52 ? C10 CHD 503 A 1 
HETATM 13 C C11 CHD . . . E 4 35.734 28.272 11.484 1 82.63 ? C11 CHD 503 A 1 
HETATM 14 C C12 CHD . . . E 4 36.191 29.435 10.59 1 82.15 ? C12 CHD 503 A 1 
HETATM 15 O O12 CHD . . . E 4 35.224 29.703 9.57 1 80.31 ? O12 CHD 503 A 1 
HETATM 16 C C13 CHD . . . E 4 37.556 29.164 9.985 1 83.45 ? C13 CHD 503 A 1 
HETATM 17 C C14 CHD . . . E 4 37.55 27.798 9.3 1 83.51 ? C14 CHD 503 A 1 
HETATM 18 C C15 CHD . . . E 4 38.851 27.759 8.501 1 84.03 ? C15 CHD 503 A 1 
HETATM 19 C C16 CHD . . . E 4 38.991 29.208 8.016 1 84.56 ? C16 CHD 503 A 1 
HETATM 20 C C17 CHD . . . E 4 37.921 30.021 8.761 1 84.52 ? C17 CHD 503 A 1 
HETATM 21 C C18 CHD . . . E 4 38.61 29.189 11.11 1 83.86 ? C18 CHD 503 A 1 
HETATM 22 C C19 CHD . . . E 4 36.695 26.139 13.166 1 80.83 ? C19 CHD 503 A 1 
HETATM 23 C C20 CHD . . . E 4 38.32 31.496 8.888 1 85.78 ? C20 CHD 503 A 1 
HETATM 24 C C21 CHD . . . E 4 38.061 32.113 10.262 1 86.66 ? C21 CHD 503 A 1 
HETATM 25 C C22 CHD . . . E 4 37.663 32.324 7.771 1 87.02 ? C22 CHD 503 A 1 
HETATM 26 C C23 CHD . . . E 4 38.499 33.574 7.5 1 88.1 ? C23 CHD 503 A 1 
HETATM 27 O O25 CHD . . . E 4 38.613 33.143 5.133 1 89.51 ? O25 CHD 503 A 1 
HETATM 28 C C24 CHD . . . E 4 38.601 34.004 6.051 1 89.37 ? C24 CHD 503 A 1 
HETATM 29 O O26 CHD . . . E 4 38.702 35.238 5.843 1 89.8 ? O26 CHD 503 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           29 
#