data_4KMW # _model_server_result.job_id AttV32MYoGdhP4CetKX3IQ _model_server_result.datetime_utc '2024-11-15 10:35:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4kmw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 4KMW # _exptl.entry_id 4KMW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 197.446 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,4,6-trichlorophenol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4KMW _cell.length_a 58.553 _cell.length_b 67.259 _cell.length_c 67.89 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4KMW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,I 1 1 B,E,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 89 A HIS 89 1_555 C FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc2 B NE2 HIS 89 B HIS 89 1_555 E FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? # _chem_comp.formula 'C6 H3 Cl3 O' _chem_comp.formula_weight 197.446 _chem_comp.id T6C _chem_comp.mon_nstd_flag . _chem_comp.name 2,4,6-trichlorophenol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL2 C2 T6C sing 376 n n CL4 C4 T6C sing 377 n n C3 C2 T6C doub 378 n y C3 C4 T6C sing 379 n y C2 C1 T6C sing 380 n y C4 C5 T6C doub 381 n y C1 O1 T6C sing 382 n n C1 C6 T6C doub 383 n y C5 C6 T6C sing 384 n y C6 CL6 T6C sing 385 n n O1 H1 T6C sing 386 n n C3 H2 T6C sing 387 n n C5 H3 T6C sing 388 n n # _atom_sites.entry_id 4KMW _atom_sites.fract_transf_matrix[1][1] 0.017079 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014868 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01473 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 201 139 HEM HEM . D 3 T6C A 1 202 141 T6C T6C . E 2 HEM B 1 201 139 HEM HEM . F 3 T6C B 1 202 141 T6C T6C . G 4 SO4 B 1 203 1 SO4 SO4 . H 4 SO4 B 1 204 2 SO4 SO4 . I 5 HOH A 1 301 8 HOH HOH . I 5 HOH A 2 302 10 HOH HOH . I 5 HOH A 3 303 11 HOH HOH . I 5 HOH A 4 304 14 HOH HOH . I 5 HOH A 5 305 23 HOH HOH . I 5 HOH A 6 306 27 HOH HOH . I 5 HOH A 7 307 31 HOH HOH . I 5 HOH A 8 308 33 HOH HOH . I 5 HOH A 9 309 36 HOH HOH . I 5 HOH A 10 310 37 HOH HOH . I 5 HOH A 11 311 41 HOH HOH . I 5 HOH A 12 312 42 HOH HOH . I 5 HOH A 13 313 43 HOH HOH . I 5 HOH A 14 314 46 HOH HOH . I 5 HOH A 15 315 48 HOH HOH . I 5 HOH A 16 316 49 HOH HOH . I 5 HOH A 17 317 51 HOH HOH . I 5 HOH A 18 318 54 HOH HOH . I 5 HOH A 19 319 55 HOH HOH . I 5 HOH A 20 320 56 HOH HOH . I 5 HOH A 21 321 57 HOH HOH . I 5 HOH A 22 322 58 HOH HOH . I 5 HOH A 23 323 59 HOH HOH . I 5 HOH A 24 324 63 HOH HOH . I 5 HOH A 25 325 64 HOH HOH . I 5 HOH A 26 326 65 HOH HOH . I 5 HOH A 27 327 66 HOH HOH . I 5 HOH A 28 328 69 HOH HOH . I 5 HOH A 29 329 70 HOH HOH . I 5 HOH A 30 330 92 HOH HOH . I 5 HOH A 31 331 129 HOH HOH . I 5 HOH A 32 332 130 HOH HOH . I 5 HOH A 33 333 131 HOH HOH . I 5 HOH A 34 334 133 HOH HOH . I 5 HOH A 35 335 134 HOH HOH . I 5 HOH A 36 336 135 HOH HOH . I 5 HOH A 37 337 137 HOH HOH . I 5 HOH A 38 338 139 HOH HOH . I 5 HOH A 39 339 140 HOH HOH . I 5 HOH A 40 340 145 HOH HOH . I 5 HOH A 41 341 148 HOH HOH . I 5 HOH A 42 342 152 HOH HOH . I 5 HOH A 43 343 153 HOH HOH . I 5 HOH A 44 344 154 HOH HOH . I 5 HOH A 45 345 155 HOH HOH . I 5 HOH A 46 346 157 HOH HOH . I 5 HOH A 47 347 159 HOH HOH . I 5 HOH A 48 348 162 HOH HOH . I 5 HOH A 49 349 163 HOH HOH . I 5 HOH A 50 350 165 HOH HOH . I 5 HOH A 51 351 166 HOH HOH . I 5 HOH A 52 352 167 HOH HOH . I 5 HOH A 53 353 169 HOH HOH . I 5 HOH A 54 354 171 HOH HOH . I 5 HOH A 55 355 172 HOH HOH . I 5 HOH A 56 356 173 HOH HOH . I 5 HOH A 57 357 174 HOH HOH . I 5 HOH A 58 358 175 HOH HOH . I 5 HOH A 59 359 176 HOH HOH . I 5 HOH A 60 360 177 HOH HOH . I 5 HOH A 61 361 179 HOH HOH . I 5 HOH A 62 362 181 HOH HOH . I 5 HOH A 63 363 182 HOH HOH . I 5 HOH A 64 364 183 HOH HOH . I 5 HOH A 65 365 184 HOH HOH . I 5 HOH A 66 366 185 HOH HOH . I 5 HOH A 67 367 186 HOH HOH . I 5 HOH A 68 368 187 HOH HOH . I 5 HOH A 69 369 188 HOH HOH . I 5 HOH A 70 370 189 HOH HOH . I 5 HOH A 71 371 191 HOH HOH . I 5 HOH A 72 372 192 HOH HOH . I 5 HOH A 73 373 197 HOH HOH . I 5 HOH A 74 374 202 HOH HOH . I 5 HOH A 75 375 203 HOH HOH . I 5 HOH A 76 376 204 HOH HOH . I 5 HOH A 77 377 205 HOH HOH . I 5 HOH A 78 378 207 HOH HOH . I 5 HOH A 79 379 208 HOH HOH . I 5 HOH A 80 380 209 HOH HOH . I 5 HOH A 81 381 210 HOH HOH . I 5 HOH A 82 382 212 HOH HOH . I 5 HOH A 83 383 213 HOH HOH . I 5 HOH A 84 384 214 HOH HOH . I 5 HOH A 85 385 216 HOH HOH . I 5 HOH A 86 386 217 HOH HOH . I 5 HOH A 87 387 218 HOH HOH . I 5 HOH A 88 388 219 HOH HOH . I 5 HOH A 89 389 321 HOH HOH . I 5 HOH A 90 390 323 HOH HOH . I 5 HOH A 91 391 331 HOH HOH . I 5 HOH A 92 392 332 HOH HOH . I 5 HOH A 93 393 401 HOH HOH . I 5 HOH A 94 394 403 HOH HOH . I 5 HOH A 95 395 405 HOH HOH . I 5 HOH A 96 396 406 HOH HOH . I 5 HOH A 97 397 407 HOH HOH . I 5 HOH A 98 398 409 HOH HOH . I 5 HOH A 99 399 410 HOH HOH . I 5 HOH A 100 400 412 HOH HOH . I 5 HOH A 101 401 413 HOH HOH . I 5 HOH A 102 402 414 HOH HOH . I 5 HOH A 103 403 415 HOH HOH . I 5 HOH A 104 404 416 HOH HOH . I 5 HOH A 105 405 417 HOH HOH . I 5 HOH A 106 406 422 HOH HOH . I 5 HOH A 107 407 423 HOH HOH . J 5 HOH B 1 301 4 HOH HOH . J 5 HOH B 2 302 5 HOH HOH . J 5 HOH B 3 303 6 HOH HOH . J 5 HOH B 4 304 7 HOH HOH . J 5 HOH B 5 305 9 HOH HOH . J 5 HOH B 6 306 12 HOH HOH . J 5 HOH B 7 307 13 HOH HOH . J 5 HOH B 8 308 15 HOH HOH . J 5 HOH B 9 309 16 HOH HOH . J 5 HOH B 10 310 17 HOH HOH . J 5 HOH B 11 311 18 HOH HOH . J 5 HOH B 12 312 19 HOH HOH . J 5 HOH B 13 313 20 HOH HOH . J 5 HOH B 14 314 21 HOH HOH . J 5 HOH B 15 315 22 HOH HOH . J 5 HOH B 16 316 24 HOH HOH . J 5 HOH B 17 317 25 HOH HOH . J 5 HOH B 18 318 26 HOH HOH . J 5 HOH B 19 319 28 HOH HOH . J 5 HOH B 20 320 29 HOH HOH . J 5 HOH B 21 321 30 HOH HOH . J 5 HOH B 22 322 32 HOH HOH . J 5 HOH B 23 323 34 HOH HOH . J 5 HOH B 24 324 35 HOH HOH . J 5 HOH B 25 325 38 HOH HOH . J 5 HOH B 26 326 39 HOH HOH . J 5 HOH B 27 327 40 HOH HOH . J 5 HOH B 28 328 44 HOH HOH . J 5 HOH B 29 329 45 HOH HOH . J 5 HOH B 30 330 47 HOH HOH . J 5 HOH B 31 331 50 HOH HOH . J 5 HOH B 32 332 52 HOH HOH . J 5 HOH B 33 333 53 HOH HOH . J 5 HOH B 34 334 60 HOH HOH . J 5 HOH B 35 335 61 HOH HOH . J 5 HOH B 36 336 62 HOH HOH . J 5 HOH B 37 337 71 HOH HOH . J 5 HOH B 38 338 72 HOH HOH . J 5 HOH B 39 339 73 HOH HOH . J 5 HOH B 40 340 74 HOH HOH . J 5 HOH B 41 341 75 HOH HOH . J 5 HOH B 42 342 76 HOH HOH . J 5 HOH B 43 343 77 HOH HOH . J 5 HOH B 44 344 78 HOH HOH . J 5 HOH B 45 345 79 HOH HOH . J 5 HOH B 46 346 80 HOH HOH . J 5 HOH B 47 347 81 HOH HOH . J 5 HOH B 48 348 83 HOH HOH . J 5 HOH B 49 349 84 HOH HOH . J 5 HOH B 50 350 85 HOH HOH . J 5 HOH B 51 351 86 HOH HOH . J 5 HOH B 52 352 87 HOH HOH . J 5 HOH B 53 353 88 HOH HOH . J 5 HOH B 54 354 89 HOH HOH . J 5 HOH B 55 355 90 HOH HOH . J 5 HOH B 56 356 91 HOH HOH . J 5 HOH B 57 357 93 HOH HOH . J 5 HOH B 58 358 94 HOH HOH . J 5 HOH B 59 359 96 HOH HOH . J 5 HOH B 60 360 97 HOH HOH . J 5 HOH B 61 361 98 HOH HOH . J 5 HOH B 62 362 99 HOH HOH . J 5 HOH B 63 363 101 HOH HOH . J 5 HOH B 64 364 102 HOH HOH . J 5 HOH B 65 365 103 HOH HOH . J 5 HOH B 66 366 105 HOH HOH . J 5 HOH B 67 367 106 HOH HOH . J 5 HOH B 68 368 107 HOH HOH . J 5 HOH B 69 369 108 HOH HOH . J 5 HOH B 70 370 109 HOH HOH . J 5 HOH B 71 371 111 HOH HOH . J 5 HOH B 72 372 113 HOH HOH . J 5 HOH B 73 373 115 HOH HOH . J 5 HOH B 74 374 116 HOH HOH . J 5 HOH B 75 375 117 HOH HOH . J 5 HOH B 76 376 118 HOH HOH . J 5 HOH B 77 377 119 HOH HOH . J 5 HOH B 78 378 121 HOH HOH . J 5 HOH B 79 379 122 HOH HOH . J 5 HOH B 80 380 124 HOH HOH . J 5 HOH B 81 381 125 HOH HOH . J 5 HOH B 82 382 126 HOH HOH . J 5 HOH B 83 383 128 HOH HOH . J 5 HOH B 84 384 138 HOH HOH . J 5 HOH B 85 385 147 HOH HOH . J 5 HOH B 86 386 198 HOH HOH . J 5 HOH B 87 387 199 HOH HOH . J 5 HOH B 88 388 200 HOH HOH . J 5 HOH B 89 389 221 HOH HOH . J 5 HOH B 90 390 224 HOH HOH . J 5 HOH B 91 391 301 HOH HOH . J 5 HOH B 92 392 302 HOH HOH . J 5 HOH B 93 393 303 HOH HOH . J 5 HOH B 94 394 304 HOH HOH . J 5 HOH B 95 395 305 HOH HOH . J 5 HOH B 96 396 306 HOH HOH . J 5 HOH B 97 397 315 HOH HOH . J 5 HOH B 98 398 319 HOH HOH . J 5 HOH B 99 399 320 HOH HOH . J 5 HOH B 100 400 326 HOH HOH . J 5 HOH B 101 401 327 HOH HOH . J 5 HOH B 102 402 333 HOH HOH . J 5 HOH B 103 403 425 HOH HOH . J 5 HOH B 104 404 427 HOH HOH . J 5 HOH B 105 405 428 HOH HOH . J 5 HOH B 106 406 429 HOH HOH . J 5 HOH B 107 407 430 HOH HOH . J 5 HOH B 108 408 432 HOH HOH . J 5 HOH B 109 409 433 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CL CL2 T6C . . . D 3 7.802 -7.226 14.346 1 46.84 ? CL2 T6C 202 A 1 HETATM 2 C C2 T6C . . . D 3 8.037 -5.697 15.18 1 43.3 ? C2 T6C 202 A 1 HETATM 3 C C1 T6C . . . D 3 8.721 -5.689 16.368 1 43.93 ? C1 T6C 202 A 1 HETATM 4 C C6 T6C . . . D 3 8.882 -4.459 16.998 1 37.34 ? C6 T6C 202 A 1 HETATM 5 CL CL6 T6C . . . D 3 9.711 -4.388 18.541 1 37.72 ? CL6 T6C 202 A 1 HETATM 6 O O1 T6C . . . D 3 9.226 -6.864 16.861 1 41.02 ? O1 T6C 202 A 1 HETATM 7 C C3 T6C . . . D 3 7.533 -4.522 14.66 1 40.54 ? C3 T6C 202 A 1 HETATM 8 C C4 T6C . . . D 3 7.698 -3.323 15.316 1 36.99 ? C4 T6C 202 A 1 HETATM 9 CL CL4 T6C . . . D 3 6.979 -1.859 14.6 1 39.38 ? CL4 T6C 202 A 1 HETATM 10 C C5 T6C . . . D 3 8.391 -3.265 16.499 1 31.44 ? C5 T6C 202 A 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #