data_4KOY # _model_server_result.job_id abuCi0zR5zNUzc4XFEuqGw _model_server_result.datetime_utc '2024-11-13 05:45:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4koy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":215}' # _entry.id 4KOY # _exptl.entry_id 4KOY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4KOY _cell.length_a 58 _cell.length_b 76.059 _cell.length_c 39.303 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4KOY _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 P N N ? 5 Q N N ? 5 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 7 A HIS 5 1_555 P ZN ZN . A ZN 215 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.034 ? metalc ? metalc2 A NE2 HIS 7 A HIS 5 1_555 P ZN ZN . A ZN 215 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.2 ? metalc ? metalc3 A NE2 HIS 59 A HIS 57 1_555 Q ZN ZN . A ZN 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc4 A NE2 HIS 144 A HIS 142 1_555 R ZN ZN . A ZN 217 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.975 ? metalc ? metalc5 P ZN ZN . A ZN 215 1_555 S O HOH . A HOH 435 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.655 ? metalc ? metalc6 P ZN ZN . A ZN 215 1_555 S O HOH . A HOH 516 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.478 ? metalc ? metalc7 Q ZN ZN . A ZN 216 1_555 S O HOH . A HOH 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc8 Q ZN ZN . A ZN 216 1_555 S O HOH . A HOH 463 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.331 ? metalc ? metalc9 Q ZN ZN . A ZN 216 1_555 S O HOH . A HOH 463 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.389 ? metalc ? metalc10 Q ZN ZN . A ZN 216 1_555 S O HOH . A HOH 490 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc11 Q ZN ZN . A ZN 216 1_555 S O HOH . A HOH 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.917 ? metalc ? metalc12 R ZN ZN . A ZN 217 1_555 S O HOH . A HOH 429 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.907 ? metalc ? metalc13 R ZN ZN . A ZN 217 1_555 S O HOH . A HOH 456 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.05 ? metalc ? metalc14 R ZN ZN . A ZN 217 1_555 S O HOH . A HOH 507 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.114 ? metalc ? metalc15 R ZN ZN . A ZN 217 1_555 S O HOH . A HOH 517 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.34 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4KOY _atom_sites.fract_transf_matrix[1][1] 0.017241 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013148 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025443 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 201 1 SO4 SO4 . C 2 SO4 A 1 202 2 SO4 SO4 . D 3 EDO A 1 203 1 EDO EDO . E 3 EDO A 1 204 1 EDO EDO . F 3 EDO A 1 205 1 EDO EDO . G 3 EDO A 1 206 1 EDO EDO . H 3 EDO A 1 207 1 EDO EDO . I 3 EDO A 1 208 1 EDO EDO . J 3 EDO A 1 209 1 EDO EDO . K 3 EDO A 1 210 1 EDO EDO . L 3 EDO A 1 211 1 EDO EDO . M 3 EDO A 1 212 1 EDO EDO . N 3 EDO A 1 213 1 EDO EDO . O 4 CSC A 1 214 1 CSC CSC . P 5 ZN A 1 215 1 ZN ZN . Q 5 ZN A 1 216 1 ZN ZN . R 5 ZN A 1 217 1 ZN ZN . S 6 HOH A 1 301 2 HOH HOH . S 6 HOH A 2 302 3 HOH HOH . S 6 HOH A 3 303 5 HOH HOH . S 6 HOH A 4 304 6 HOH HOH . S 6 HOH A 5 305 7 HOH HOH . S 6 HOH A 6 306 8 HOH HOH . S 6 HOH A 7 307 9 HOH HOH . S 6 HOH A 8 308 10 HOH HOH . S 6 HOH A 9 309 11 HOH HOH . S 6 HOH A 10 310 12 HOH HOH . S 6 HOH A 11 311 14 HOH HOH . S 6 HOH A 12 312 15 HOH HOH . S 6 HOH A 13 313 17 HOH HOH . S 6 HOH A 14 314 18 HOH HOH . S 6 HOH A 15 315 19 HOH HOH . S 6 HOH A 16 316 20 HOH HOH . S 6 HOH A 17 317 21 HOH HOH . S 6 HOH A 18 318 22 HOH HOH . S 6 HOH A 19 319 23 HOH HOH . S 6 HOH A 20 320 24 HOH HOH . S 6 HOH A 21 321 27 HOH HOH . S 6 HOH A 22 322 28 HOH HOH . S 6 HOH A 23 323 29 HOH HOH . S 6 HOH A 24 324 30 HOH HOH . S 6 HOH A 25 325 31 HOH HOH . S 6 HOH A 26 326 32 HOH HOH . S 6 HOH A 27 327 33 HOH HOH . S 6 HOH A 28 328 34 HOH HOH . S 6 HOH A 29 329 36 HOH HOH . S 6 HOH A 30 330 39 HOH HOH . S 6 HOH A 31 331 40 HOH HOH . S 6 HOH A 32 332 41 HOH HOH . S 6 HOH A 33 333 43 HOH HOH . S 6 HOH A 34 334 44 HOH HOH . S 6 HOH A 35 335 45 HOH HOH . S 6 HOH A 36 336 46 HOH HOH . S 6 HOH A 37 337 47 HOH HOH . S 6 HOH A 38 338 48 HOH HOH . S 6 HOH A 39 339 51 HOH HOH . S 6 HOH A 40 340 52 HOH HOH . S 6 HOH A 41 341 55 HOH HOH . S 6 HOH A 42 342 57 HOH HOH . S 6 HOH A 43 343 58 HOH HOH . S 6 HOH A 44 344 59 HOH HOH . S 6 HOH A 45 345 62 HOH HOH . S 6 HOH A 46 346 63 HOH HOH . S 6 HOH A 47 347 64 HOH HOH . S 6 HOH A 48 348 65 HOH HOH . S 6 HOH A 49 349 66 HOH HOH . S 6 HOH A 50 350 67 HOH HOH . S 6 HOH A 51 351 68 HOH HOH . S 6 HOH A 52 352 69 HOH HOH . S 6 HOH A 53 353 72 HOH HOH . S 6 HOH A 54 354 73 HOH HOH . S 6 HOH A 55 355 74 HOH HOH . S 6 HOH A 56 356 75 HOH HOH . S 6 HOH A 57 357 76 HOH HOH . S 6 HOH A 58 358 77 HOH HOH . S 6 HOH A 59 359 78 HOH HOH . S 6 HOH A 60 360 81 HOH HOH . S 6 HOH A 61 361 82 HOH HOH . S 6 HOH A 62 362 83 HOH HOH . S 6 HOH A 63 363 84 HOH HOH . S 6 HOH A 64 364 86 HOH HOH . S 6 HOH A 65 365 88 HOH HOH . S 6 HOH A 66 366 89 HOH HOH . S 6 HOH A 67 367 90 HOH HOH . S 6 HOH A 68 368 91 HOH HOH . S 6 HOH A 69 369 93 HOH HOH . S 6 HOH A 70 370 94 HOH HOH . S 6 HOH A 71 371 95 HOH HOH . S 6 HOH A 72 372 96 HOH HOH . S 6 HOH A 73 373 97 HOH HOH . S 6 HOH A 74 374 99 HOH HOH . S 6 HOH A 75 375 100 HOH HOH . S 6 HOH A 76 376 101 HOH HOH . S 6 HOH A 77 377 103 HOH HOH . S 6 HOH A 78 378 106 HOH HOH . S 6 HOH A 79 379 107 HOH HOH . S 6 HOH A 80 380 109 HOH HOH . S 6 HOH A 81 381 110 HOH HOH . S 6 HOH A 82 382 111 HOH HOH . S 6 HOH A 83 383 112 HOH HOH . S 6 HOH A 84 384 113 HOH HOH . S 6 HOH A 85 385 114 HOH HOH . S 6 HOH A 86 386 115 HOH HOH . S 6 HOH A 87 387 116 HOH HOH . S 6 HOH A 88 388 117 HOH HOH . S 6 HOH A 89 389 118 HOH HOH . S 6 HOH A 90 390 119 HOH HOH . S 6 HOH A 91 391 120 HOH HOH . S 6 HOH A 92 392 121 HOH HOH . S 6 HOH A 93 393 122 HOH HOH . S 6 HOH A 94 394 123 HOH HOH . S 6 HOH A 95 395 124 HOH HOH . S 6 HOH A 96 396 125 HOH HOH . S 6 HOH A 97 397 126 HOH HOH . S 6 HOH A 98 398 127 HOH HOH . S 6 HOH A 99 399 130 HOH HOH . S 6 HOH A 100 400 134 HOH HOH . S 6 HOH A 101 401 135 HOH HOH . S 6 HOH A 102 402 138 HOH HOH . S 6 HOH A 103 403 139 HOH HOH . S 6 HOH A 104 404 141 HOH HOH . S 6 HOH A 105 405 143 HOH HOH . S 6 HOH A 106 406 144 HOH HOH . S 6 HOH A 107 407 148 HOH HOH . S 6 HOH A 108 408 149 HOH HOH . S 6 HOH A 109 409 150 HOH HOH . S 6 HOH A 110 410 151 HOH HOH . S 6 HOH A 111 411 152 HOH HOH . S 6 HOH A 112 412 153 HOH HOH . S 6 HOH A 113 413 154 HOH HOH . S 6 HOH A 114 414 156 HOH HOH . S 6 HOH A 115 415 157 HOH HOH . S 6 HOH A 116 416 158 HOH HOH . S 6 HOH A 117 417 159 HOH HOH . S 6 HOH A 118 418 160 HOH HOH . S 6 HOH A 119 419 161 HOH HOH . S 6 HOH A 120 420 162 HOH HOH . S 6 HOH A 121 421 163 HOH HOH . S 6 HOH A 122 422 164 HOH HOH . S 6 HOH A 123 423 166 HOH HOH . S 6 HOH A 124 424 168 HOH HOH . S 6 HOH A 125 425 169 HOH HOH . S 6 HOH A 126 426 170 HOH HOH . S 6 HOH A 127 427 172 HOH HOH . S 6 HOH A 128 428 174 HOH HOH . S 6 HOH A 129 429 179 HOH HOH . S 6 HOH A 130 430 191 HOH HOH . S 6 HOH A 131 431 193 HOH HOH . S 6 HOH A 132 432 194 HOH HOH . S 6 HOH A 133 433 195 HOH HOH . S 6 HOH A 134 434 196 HOH HOH . S 6 HOH A 135 435 198 HOH HOH . S 6 HOH A 136 436 200 HOH HOH . S 6 HOH A 137 437 202 HOH HOH . S 6 HOH A 138 438 204 HOH HOH . S 6 HOH A 139 439 211 HOH HOH . S 6 HOH A 140 440 213 HOH HOH . S 6 HOH A 141 441 214 HOH HOH . S 6 HOH A 142 442 215 HOH HOH . S 6 HOH A 143 443 218 HOH HOH . S 6 HOH A 144 444 222 HOH HOH . S 6 HOH A 145 445 226 HOH HOH . S 6 HOH A 146 446 227 HOH HOH . S 6 HOH A 147 447 228 HOH HOH . S 6 HOH A 148 448 229 HOH HOH . S 6 HOH A 149 449 230 HOH HOH . S 6 HOH A 150 450 231 HOH HOH . S 6 HOH A 151 451 233 HOH HOH . S 6 HOH A 152 452 234 HOH HOH . S 6 HOH A 153 453 235 HOH HOH . S 6 HOH A 154 454 236 HOH HOH . S 6 HOH A 155 455 237 HOH HOH . S 6 HOH A 156 456 241 HOH HOH . S 6 HOH A 157 457 242 HOH HOH . S 6 HOH A 158 458 243 HOH HOH . S 6 HOH A 159 459 244 HOH HOH . S 6 HOH A 160 460 246 HOH HOH . S 6 HOH A 161 461 248 HOH HOH . S 6 HOH A 162 462 249 HOH HOH . S 6 HOH A 163 463 250 HOH HOH . S 6 HOH A 164 464 252 HOH HOH . S 6 HOH A 165 465 254 HOH HOH . S 6 HOH A 166 466 255 HOH HOH . S 6 HOH A 167 467 256 HOH HOH . S 6 HOH A 168 468 257 HOH HOH . S 6 HOH A 169 469 258 HOH HOH . S 6 HOH A 170 470 259 HOH HOH . S 6 HOH A 171 471 261 HOH HOH . S 6 HOH A 172 472 262 HOH HOH . S 6 HOH A 173 473 263 HOH HOH . S 6 HOH A 174 474 265 HOH HOH . S 6 HOH A 175 475 268 HOH HOH . S 6 HOH A 176 476 269 HOH HOH . S 6 HOH A 177 477 270 HOH HOH . S 6 HOH A 178 478 271 HOH HOH . S 6 HOH A 179 479 272 HOH HOH . S 6 HOH A 180 480 273 HOH HOH . S 6 HOH A 181 481 276 HOH HOH . S 6 HOH A 182 482 277 HOH HOH . S 6 HOH A 183 483 279 HOH HOH . S 6 HOH A 184 484 280 HOH HOH . S 6 HOH A 185 485 281 HOH HOH . S 6 HOH A 186 486 282 HOH HOH . S 6 HOH A 187 487 283 HOH HOH . S 6 HOH A 188 488 284 HOH HOH . S 6 HOH A 189 489 285 HOH HOH . S 6 HOH A 190 490 286 HOH HOH . S 6 HOH A 191 491 288 HOH HOH . S 6 HOH A 192 492 289 HOH HOH . S 6 HOH A 193 493 290 HOH HOH . S 6 HOH A 194 494 291 HOH HOH . S 6 HOH A 195 495 292 HOH HOH . S 6 HOH A 196 496 293 HOH HOH . S 6 HOH A 197 497 294 HOH HOH . S 6 HOH A 198 498 295 HOH HOH . S 6 HOH A 199 499 296 HOH HOH . S 6 HOH A 200 500 297 HOH HOH . S 6 HOH A 201 501 298 HOH HOH . S 6 HOH A 202 502 299 HOH HOH . S 6 HOH A 203 503 300 HOH HOH . S 6 HOH A 204 504 301 HOH HOH . S 6 HOH A 205 505 302 HOH HOH . S 6 HOH A 206 506 303 HOH HOH . S 6 HOH A 207 507 304 HOH HOH . S 6 HOH A 208 508 305 HOH HOH . S 6 HOH A 209 509 306 HOH HOH . S 6 HOH A 210 510 307 HOH HOH . S 6 HOH A 211 511 308 HOH HOH . S 6 HOH A 212 512 309 HOH HOH . S 6 HOH A 213 513 311 HOH HOH . S 6 HOH A 214 514 312 HOH HOH . S 6 HOH A 215 515 313 HOH HOH . S 6 HOH A 216 516 314 HOH HOH . S 6 HOH A 217 517 315 HOH HOH . S 6 HOH A 218 518 1 HOH HOH . S 6 HOH A 219 519 2 HOH HOH . S 6 HOH A 220 520 3 HOH HOH . S 6 HOH A 221 521 4 HOH HOH . S 6 HOH A 222 522 5 HOH HOH . S 6 HOH A 223 523 6 HOH HOH . S 6 HOH A 224 524 7 HOH HOH . S 6 HOH A 225 525 8 HOH HOH . S 6 HOH A 226 526 9 HOH HOH . S 6 HOH A 227 527 12 HOH HOH . S 6 HOH A 228 528 1 HOH HOH . S 6 HOH A 229 529 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 ZN ZN ZN . A . P 5 -15.486 25.86 -3.302 0.5 53.82 ? ZN ZN 215 A 1 HETATM 2 ZN ZN ZN . B . P 5 -12.554 27.141 -3.048 0.5 45.01 ? ZN ZN 215 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 2 #