data_4KQI
#
_model_server_result.job_id            CS8p18tQtmpyNtrP8G9n5w 
_model_server_result.datetime_utc      '2024-11-24 05:25:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4kqi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":403}' 
#
_entry.id    4KQI 
#
_exptl.entry_id    4KQI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              123.109 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NICOTINIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4KQI 
_cell.length_a            46.753 
_cell.length_b            71.278 
_cell.length_c            89.444 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4KQI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 2 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 71.278 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 160 A CYS 160 1_555 A SG CYS 256 A CYS 256 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.981 ? 
disulf ? disulf2 A SG CYS 160 A CYS 160 1_555 A SG CYS 256 A CYS 256 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.063 ? 
#
_chem_comp.formula           'C6 H5 N O2' 
_chem_comp.formula_weight    123.109 
_chem_comp.id                NIO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NICOTINIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N C1 NIO doub 246 n y 
N C5 NIO sing 247 n y 
C1 C2 NIO sing 248 n y 
C1 H1 NIO sing 249 n n 
C2 C3 NIO doub 250 n y 
C2 C6 NIO sing 251 n n 
C3 C4 NIO sing 252 n y 
C3 H3 NIO sing 253 n n 
C4 C5 NIO doub 254 n y 
C4 H4 NIO sing 255 n n 
C5 H5 NIO sing 256 n n 
C6 O1 NIO doub 257 n n 
C6 O2 NIO sing 258 n n 
O2 HO2 NIO sing 259 n n 
#
_atom_sites.entry_id                     4KQI 
_atom_sites.fract_transf_matrix[1][1]    0.021389 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01403 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01118 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 RBZ A 1 401 990 RBZ RBZ . 
C 3 EDO A 1 402 801 EDO EDO . 
D 4 NIO A 1 403 901 NIO NIO . 
E 5 HOH A 1 501 1 HOH HOH . 
E 5 HOH A 2 502 2 HOH HOH . 
E 5 HOH A 3 503 3 HOH HOH . 
E 5 HOH A 4 504 4 HOH HOH . 
E 5 HOH A 5 505 5 HOH HOH . 
E 5 HOH A 6 506 6 HOH HOH . 
E 5 HOH A 7 507 7 HOH HOH . 
E 5 HOH A 8 508 8 HOH HOH . 
E 5 HOH A 9 509 9 HOH HOH . 
E 5 HOH A 10 510 10 HOH HOH . 
E 5 HOH A 11 511 11 HOH HOH . 
E 5 HOH A 12 512 12 HOH HOH . 
E 5 HOH A 13 513 13 HOH HOH . 
E 5 HOH A 14 514 14 HOH HOH . 
E 5 HOH A 15 515 15 HOH HOH . 
E 5 HOH A 16 516 16 HOH HOH . 
E 5 HOH A 17 517 17 HOH HOH . 
E 5 HOH A 18 518 18 HOH HOH . 
E 5 HOH A 19 519 19 HOH HOH . 
E 5 HOH A 20 520 20 HOH HOH . 
E 5 HOH A 21 521 21 HOH HOH . 
E 5 HOH A 22 522 22 HOH HOH . 
E 5 HOH A 23 523 23 HOH HOH . 
E 5 HOH A 24 524 24 HOH HOH . 
E 5 HOH A 25 525 25 HOH HOH . 
E 5 HOH A 26 526 26 HOH HOH . 
E 5 HOH A 27 527 27 HOH HOH . 
E 5 HOH A 28 528 28 HOH HOH . 
E 5 HOH A 29 529 29 HOH HOH . 
E 5 HOH A 30 530 30 HOH HOH . 
E 5 HOH A 31 531 31 HOH HOH . 
E 5 HOH A 32 532 32 HOH HOH . 
E 5 HOH A 33 533 33 HOH HOH . 
E 5 HOH A 34 534 34 HOH HOH . 
E 5 HOH A 35 535 35 HOH HOH . 
E 5 HOH A 36 536 36 HOH HOH . 
E 5 HOH A 37 537 37 HOH HOH . 
E 5 HOH A 38 538 38 HOH HOH . 
E 5 HOH A 39 539 39 HOH HOH . 
E 5 HOH A 40 540 41 HOH HOH . 
E 5 HOH A 41 541 42 HOH HOH . 
E 5 HOH A 42 542 43 HOH HOH . 
E 5 HOH A 43 543 44 HOH HOH . 
E 5 HOH A 44 544 45 HOH HOH . 
E 5 HOH A 45 545 46 HOH HOH . 
E 5 HOH A 46 546 47 HOH HOH . 
E 5 HOH A 47 547 48 HOH HOH . 
E 5 HOH A 48 548 49 HOH HOH . 
E 5 HOH A 49 549 50 HOH HOH . 
E 5 HOH A 50 550 51 HOH HOH . 
E 5 HOH A 51 551 52 HOH HOH . 
E 5 HOH A 52 552 53 HOH HOH . 
E 5 HOH A 53 553 54 HOH HOH . 
E 5 HOH A 54 554 55 HOH HOH . 
E 5 HOH A 55 555 56 HOH HOH . 
E 5 HOH A 56 556 57 HOH HOH . 
E 5 HOH A 57 557 58 HOH HOH . 
E 5 HOH A 58 558 59 HOH HOH . 
E 5 HOH A 59 559 61 HOH HOH . 
E 5 HOH A 60 560 62 HOH HOH . 
E 5 HOH A 61 561 63 HOH HOH . 
E 5 HOH A 62 562 64 HOH HOH . 
E 5 HOH A 63 563 65 HOH HOH . 
E 5 HOH A 64 564 66 HOH HOH . 
E 5 HOH A 65 565 68 HOH HOH . 
E 5 HOH A 66 566 69 HOH HOH . 
E 5 HOH A 67 567 70 HOH HOH . 
E 5 HOH A 68 568 71 HOH HOH . 
E 5 HOH A 69 569 72 HOH HOH . 
E 5 HOH A 70 570 73 HOH HOH . 
E 5 HOH A 71 571 74 HOH HOH . 
E 5 HOH A 72 572 75 HOH HOH . 
E 5 HOH A 73 573 76 HOH HOH . 
E 5 HOH A 74 574 78 HOH HOH . 
E 5 HOH A 75 575 79 HOH HOH . 
E 5 HOH A 76 576 80 HOH HOH . 
E 5 HOH A 77 577 82 HOH HOH . 
E 5 HOH A 78 578 83 HOH HOH . 
E 5 HOH A 79 579 84 HOH HOH . 
E 5 HOH A 80 580 85 HOH HOH . 
E 5 HOH A 81 581 87 HOH HOH . 
E 5 HOH A 82 582 89 HOH HOH . 
E 5 HOH A 83 583 90 HOH HOH . 
E 5 HOH A 84 584 91 HOH HOH . 
E 5 HOH A 85 585 92 HOH HOH . 
E 5 HOH A 86 586 93 HOH HOH . 
E 5 HOH A 87 587 94 HOH HOH . 
E 5 HOH A 88 588 95 HOH HOH . 
E 5 HOH A 89 589 96 HOH HOH . 
E 5 HOH A 90 590 97 HOH HOH . 
E 5 HOH A 91 591 98 HOH HOH . 
E 5 HOH A 92 592 99 HOH HOH . 
E 5 HOH A 93 593 100 HOH HOH . 
E 5 HOH A 94 594 102 HOH HOH . 
E 5 HOH A 95 595 103 HOH HOH . 
E 5 HOH A 96 596 104 HOH HOH . 
E 5 HOH A 97 597 105 HOH HOH . 
E 5 HOH A 98 598 108 HOH HOH . 
E 5 HOH A 99 599 109 HOH HOH . 
E 5 HOH A 100 600 115 HOH HOH . 
E 5 HOH A 101 601 116 HOH HOH . 
E 5 HOH A 102 602 117 HOH HOH . 
E 5 HOH A 103 603 118 HOH HOH . 
E 5 HOH A 104 604 119 HOH HOH . 
E 5 HOH A 105 605 120 HOH HOH . 
E 5 HOH A 106 606 122 HOH HOH . 
E 5 HOH A 107 607 123 HOH HOH . 
E 5 HOH A 108 608 124 HOH HOH . 
E 5 HOH A 109 609 125 HOH HOH . 
E 5 HOH A 110 610 126 HOH HOH . 
E 5 HOH A 111 611 127 HOH HOH . 
E 5 HOH A 112 612 128 HOH HOH . 
E 5 HOH A 113 613 129 HOH HOH . 
E 5 HOH A 114 614 130 HOH HOH . 
E 5 HOH A 115 615 132 HOH HOH . 
E 5 HOH A 116 616 133 HOH HOH . 
E 5 HOH A 117 617 134 HOH HOH . 
E 5 HOH A 118 618 135 HOH HOH . 
E 5 HOH A 119 619 136 HOH HOH . 
E 5 HOH A 120 620 137 HOH HOH . 
E 5 HOH A 121 621 138 HOH HOH . 
E 5 HOH A 122 622 140 HOH HOH . 
E 5 HOH A 123 623 143 HOH HOH . 
E 5 HOH A 124 624 144 HOH HOH . 
E 5 HOH A 125 625 145 HOH HOH . 
E 5 HOH A 126 626 147 HOH HOH . 
E 5 HOH A 127 627 148 HOH HOH . 
E 5 HOH A 128 628 149 HOH HOH . 
E 5 HOH A 129 629 150 HOH HOH . 
E 5 HOH A 130 630 151 HOH HOH . 
E 5 HOH A 131 631 152 HOH HOH . 
E 5 HOH A 132 632 153 HOH HOH . 
E 5 HOH A 133 633 154 HOH HOH . 
E 5 HOH A 134 634 155 HOH HOH . 
E 5 HOH A 135 635 156 HOH HOH . 
E 5 HOH A 136 636 157 HOH HOH . 
E 5 HOH A 137 637 158 HOH HOH . 
E 5 HOH A 138 638 159 HOH HOH . 
E 5 HOH A 139 639 160 HOH HOH . 
E 5 HOH A 140 640 161 HOH HOH . 
E 5 HOH A 141 641 162 HOH HOH . 
E 5 HOH A 142 642 163 HOH HOH . 
E 5 HOH A 143 643 164 HOH HOH . 
E 5 HOH A 144 644 165 HOH HOH . 
E 5 HOH A 145 645 166 HOH HOH . 
E 5 HOH A 146 646 167 HOH HOH . 
E 5 HOH A 147 647 168 HOH HOH . 
E 5 HOH A 148 648 169 HOH HOH . 
E 5 HOH A 149 649 170 HOH HOH . 
E 5 HOH A 150 650 171 HOH HOH . 
E 5 HOH A 151 651 172 HOH HOH . 
E 5 HOH A 152 652 173 HOH HOH . 
E 5 HOH A 153 653 174 HOH HOH . 
E 5 HOH A 154 654 175 HOH HOH . 
E 5 HOH A 155 655 176 HOH HOH . 
E 5 HOH A 156 656 177 HOH HOH . 
E 5 HOH A 157 657 178 HOH HOH . 
E 5 HOH A 158 658 179 HOH HOH . 
E 5 HOH A 159 659 180 HOH HOH . 
E 5 HOH A 160 660 181 HOH HOH . 
E 5 HOH A 161 661 182 HOH HOH . 
E 5 HOH A 162 662 183 HOH HOH . 
E 5 HOH A 163 663 184 HOH HOH . 
E 5 HOH A 164 664 185 HOH HOH . 
E 5 HOH A 165 665 186 HOH HOH . 
E 5 HOH A 166 666 187 HOH HOH . 
E 5 HOH A 167 667 188 HOH HOH . 
E 5 HOH A 168 668 189 HOH HOH . 
E 5 HOH A 169 669 190 HOH HOH . 
E 5 HOH A 170 670 191 HOH HOH . 
E 5 HOH A 171 671 192 HOH HOH . 
E 5 HOH A 172 672 193 HOH HOH . 
E 5 HOH A 173 673 194 HOH HOH . 
E 5 HOH A 174 674 195 HOH HOH . 
E 5 HOH A 175 675 196 HOH HOH . 
E 5 HOH A 176 676 197 HOH HOH . 
E 5 HOH A 177 677 198 HOH HOH . 
E 5 HOH A 178 678 199 HOH HOH . 
E 5 HOH A 179 679 200 HOH HOH . 
E 5 HOH A 180 680 201 HOH HOH . 
E 5 HOH A 181 681 202 HOH HOH . 
E 5 HOH A 182 682 203 HOH HOH . 
E 5 HOH A 183 683 204 HOH HOH . 
E 5 HOH A 184 684 205 HOH HOH . 
E 5 HOH A 185 685 206 HOH HOH . 
E 5 HOH A 186 686 207 HOH HOH . 
E 5 HOH A 187 687 208 HOH HOH . 
E 5 HOH A 188 688 209 HOH HOH . 
E 5 HOH A 189 689 210 HOH HOH . 
E 5 HOH A 190 690 211 HOH HOH . 
E 5 HOH A 191 691 212 HOH HOH . 
E 5 HOH A 192 692 213 HOH HOH . 
E 5 HOH A 193 693 214 HOH HOH . 
E 5 HOH A 194 694 215 HOH HOH . 
E 5 HOH A 195 695 216 HOH HOH . 
E 5 HOH A 196 696 217 HOH HOH . 
E 5 HOH A 197 697 218 HOH HOH . 
E 5 HOH A 198 698 219 HOH HOH . 
E 5 HOH A 199 699 220 HOH HOH . 
E 5 HOH A 200 700 221 HOH HOH . 
E 5 HOH A 201 701 222 HOH HOH . 
E 5 HOH A 202 702 223 HOH HOH . 
E 5 HOH A 203 703 224 HOH HOH . 
E 5 HOH A 204 704 225 HOH HOH . 
E 5 HOH A 205 705 226 HOH HOH . 
E 5 HOH A 206 706 227 HOH HOH . 
E 5 HOH A 207 707 228 HOH HOH . 
E 5 HOH A 208 708 229 HOH HOH . 
E 5 HOH A 209 709 230 HOH HOH . 
E 5 HOH A 210 710 231 HOH HOH . 
E 5 HOH A 211 711 232 HOH HOH . 
E 5 HOH A 212 712 233 HOH HOH . 
E 5 HOH A 213 713 234 HOH HOH . 
E 5 HOH A 214 714 235 HOH HOH . 
E 5 HOH A 215 715 236 HOH HOH . 
E 5 HOH A 216 716 237 HOH HOH . 
E 5 HOH A 217 717 238 HOH HOH . 
E 5 HOH A 218 718 239 HOH HOH . 
E 5 HOH A 219 719 240 HOH HOH . 
E 5 HOH A 220 720 241 HOH HOH . 
E 5 HOH A 221 721 242 HOH HOH . 
E 5 HOH A 222 722 243 HOH HOH . 
E 5 HOH A 223 723 244 HOH HOH . 
E 5 HOH A 224 724 245 HOH HOH . 
E 5 HOH A 225 725 246 HOH HOH . 
E 5 HOH A 226 726 247 HOH HOH . 
E 5 HOH A 227 727 248 HOH HOH . 
E 5 HOH A 228 728 249 HOH HOH . 
E 5 HOH A 229 729 250 HOH HOH . 
E 5 HOH A 230 730 251 HOH HOH . 
E 5 HOH A 231 731 252 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N NIO . . . D 4 54.484 17.469 4.584 1 39.6 ? N NIO 403 A 1 
HETATM 2 C C1 NIO . . . D 4 54.647 18.731 5.051 1 31.81 ? C1 NIO 403 A 1 
HETATM 3 C C2 NIO . . . D 4 53.536 19.604 5.067 1 22.55 ? C2 NIO 403 A 1 
HETATM 4 C C3 NIO . . . D 4 52.298 19.236 4.593 1 33.34 ? C3 NIO 403 A 1 
HETATM 5 C C4 NIO . . . D 4 52.159 17.946 4.077 1 30.85 ? C4 NIO 403 A 1 
HETATM 6 C C5 NIO . . . D 4 53.284 17.107 4.068 1 35.7 ? C5 NIO 403 A 1 
HETATM 7 C C6 NIO . . . D 4 53.739 20.897 5.741 1 10.81 ? C6 NIO 403 A 1 
HETATM 8 O O1 NIO . . . D 4 53.153 21.995 5.393 1 19.06 ? O1 NIO 403 A 1 
HETATM 9 O O2 NIO . . . D 4 54.99 21.025 6.055 1 25.19 ? O2 NIO 403 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           343 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           9 
#