data_4KS3
#
_model_server_result.job_id            A7Ve12hr6V1q_ttGC4QJUQ 
_model_server_result.datetime_utc      '2024-11-16 14:43:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ks3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    4KS3 
#
_exptl.entry_id    4KS3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              394.465 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(3S,4R,5R)-4-(acetylamino)-3-[4-(3-hydroxypropyl)-1H-1,2,3-triazol-1-yl]-5-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4KS3 
_cell.length_a            89.718 
_cell.length_b            89.718 
_cell.length_c            94.941 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4KS3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        79 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 4' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 
4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 10 A CYS 92 1_555 A SG CYS 337 A CYS 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? 
disulf ? disulf2 A SG CYS 42 A CYS 124 1_555 A SG CYS 47 A CYS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
disulf ? disulf3 A SG CYS 102 A CYS 183 1_555 A SG CYS 149 A CYS 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf4 A SG CYS 151 A CYS 232 1_555 A SG CYS 156 A CYS 237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
disulf ? disulf5 A SG CYS 197 A CYS 278 1_555 A SG CYS 210 A CYS 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf6 A SG CYS 199 A CYS 280 1_555 A SG CYS 208 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf7 A SG CYS 236 A CYS 318 1_555 A SG CYS 255 A CYS 337 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.903 ? 
disulf ? disulf8 A SG CYS 341 A CYS 421 1_555 A SG CYS 366 A CYS 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
metalc ? metalc1 A O ASP 212 A ASP 293 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? 
metalc ? metalc2 A O GLY 216 A GLY 297 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.741 ? 
metalc ? metalc3 A OD1 ASP 242 A ASP 324 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? 
metalc ? metalc4 A O TYR 264 A TYR 347 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? 
#
_chem_comp.formula           'C19 H30 N4 O5' 
_chem_comp.formula_weight    394.465 
_chem_comp.id                1SL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(3S,4R,5R)-4-(acetylamino)-3-[4-(3-hydroxypropyl)-1H-1,2,3-triazol-1-yl]-5-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAC CAT 1SL sing 1 n n 
CAB CAL 1SL sing 2 n n 
NAR CAT 1SL sing 3 n n 
NAR CBA 1SL sing 4 n n 
CAT OAD 1SL doub 5 n n 
CAL CAX 1SL sing 6 n n 
NAQ NBB 1SL sing 7 n y 
NAQ NAP 1SL doub 8 n y 
CAY CBA 1SL sing 9 n n 
CAY NBB 1SL sing 10 n n 
CAY CAH 1SL sing 11 n n 
CAZ OAS 1SL sing 12 n n 
CAZ CBA 1SL sing 13 n n 
CAZ CAO 1SL sing 14 n n 
OAS CAX 1SL sing 15 n n 
NBB CAI 1SL sing 16 n y 
CAX CAK 1SL sing 17 n n 
NAP CAW 1SL sing 18 n y 
CAH CAV 1SL doub 19 n n 
CAO CAV 1SL sing 20 n n 
CAV CAU 1SL sing 21 n n 
CAI CAW 1SL doub 22 n y 
CAW CAN 1SL sing 23 n n 
CAK CAA 1SL sing 24 n n 
CAU OAE 1SL doub 25 n n 
CAU OAG 1SL sing 26 n n 
CAN CAM 1SL sing 27 n n 
CAM CAJ 1SL sing 28 n n 
CAJ OAF 1SL sing 29 n n 
CAA H1 1SL sing 30 n n 
CAA H2 1SL sing 31 n n 
CAA H3 1SL sing 32 n n 
CAK H4 1SL sing 33 n n 
CAK H5 1SL sing 34 n n 
CAX H6 1SL sing 35 n n 
CAL H7 1SL sing 36 n n 
CAL H8 1SL sing 37 n n 
CAB H9 1SL sing 38 n n 
CAB H10 1SL sing 39 n n 
CAB H11 1SL sing 40 n n 
CAZ H12 1SL sing 41 n n 
CBA H13 1SL sing 42 n n 
NAR H14 1SL sing 43 n n 
CAC H15 1SL sing 44 n n 
CAC H16 1SL sing 45 n n 
CAC H17 1SL sing 46 n n 
CAO H18 1SL sing 47 n n 
CAO H19 1SL sing 48 n n 
OAG H21 1SL sing 49 n n 
CAH H22 1SL sing 50 n n 
CAY H24 1SL sing 51 n n 
CAI H25 1SL sing 52 n n 
CAN H26 1SL sing 53 n n 
CAN H27 1SL sing 54 n n 
CAM H28 1SL sing 55 n n 
CAM H29 1SL sing 56 n n 
CAJ H30 1SL sing 57 n n 
CAJ H31 1SL sing 58 n n 
OAF H32 1SL sing 59 n n 
#
_atom_sites.entry_id                     4KS3 
_atom_sites.fract_transf_matrix[1][1]    0.011146 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011146 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010533 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 1SL A 1 501 1 1SL 1SL . 
C 3 CA A 1 502 1 CA CA . 
D 4 HOH A 1 601 1 HOH HOH . 
D 4 HOH A 2 602 2 HOH HOH . 
D 4 HOH A 3 603 3 HOH HOH . 
D 4 HOH A 4 604 4 HOH HOH . 
D 4 HOH A 5 605 5 HOH HOH . 
D 4 HOH A 6 606 6 HOH HOH . 
D 4 HOH A 7 607 7 HOH HOH . 
D 4 HOH A 8 608 8 HOH HOH . 
D 4 HOH A 9 609 9 HOH HOH . 
D 4 HOH A 10 610 10 HOH HOH . 
D 4 HOH A 11 611 11 HOH HOH . 
D 4 HOH A 12 612 12 HOH HOH . 
D 4 HOH A 13 613 13 HOH HOH . 
D 4 HOH A 14 614 14 HOH HOH . 
D 4 HOH A 15 615 15 HOH HOH . 
D 4 HOH A 16 616 16 HOH HOH . 
D 4 HOH A 17 617 17 HOH HOH . 
D 4 HOH A 18 618 18 HOH HOH . 
D 4 HOH A 19 619 19 HOH HOH . 
D 4 HOH A 20 620 20 HOH HOH . 
D 4 HOH A 21 621 21 HOH HOH . 
D 4 HOH A 22 622 22 HOH HOH . 
D 4 HOH A 23 623 23 HOH HOH . 
D 4 HOH A 24 624 24 HOH HOH . 
D 4 HOH A 25 625 25 HOH HOH . 
D 4 HOH A 26 626 26 HOH HOH . 
D 4 HOH A 27 627 27 HOH HOH . 
D 4 HOH A 28 628 28 HOH HOH . 
D 4 HOH A 29 629 29 HOH HOH . 
D 4 HOH A 30 630 30 HOH HOH . 
D 4 HOH A 31 631 31 HOH HOH . 
D 4 HOH A 32 632 32 HOH HOH . 
D 4 HOH A 33 633 33 HOH HOH . 
D 4 HOH A 34 634 34 HOH HOH . 
D 4 HOH A 35 635 35 HOH HOH . 
D 4 HOH A 36 636 36 HOH HOH . 
D 4 HOH A 37 637 37 HOH HOH . 
D 4 HOH A 38 638 38 HOH HOH . 
D 4 HOH A 39 639 39 HOH HOH . 
D 4 HOH A 40 640 40 HOH HOH . 
D 4 HOH A 41 641 41 HOH HOH . 
D 4 HOH A 42 642 42 HOH HOH . 
D 4 HOH A 43 643 43 HOH HOH . 
D 4 HOH A 44 644 44 HOH HOH . 
D 4 HOH A 45 645 45 HOH HOH . 
D 4 HOH A 46 646 46 HOH HOH . 
D 4 HOH A 47 647 47 HOH HOH . 
D 4 HOH A 48 648 48 HOH HOH . 
D 4 HOH A 49 649 49 HOH HOH . 
D 4 HOH A 50 650 50 HOH HOH . 
D 4 HOH A 51 651 51 HOH HOH . 
D 4 HOH A 52 652 52 HOH HOH . 
D 4 HOH A 53 653 53 HOH HOH . 
D 4 HOH A 54 654 54 HOH HOH . 
D 4 HOH A 55 655 55 HOH HOH . 
D 4 HOH A 56 656 56 HOH HOH . 
D 4 HOH A 57 657 57 HOH HOH . 
D 4 HOH A 58 658 58 HOH HOH . 
D 4 HOH A 59 659 59 HOH HOH . 
D 4 HOH A 60 660 60 HOH HOH . 
D 4 HOH A 61 661 61 HOH HOH . 
D 4 HOH A 62 662 62 HOH HOH . 
D 4 HOH A 63 663 63 HOH HOH . 
D 4 HOH A 64 664 64 HOH HOH . 
D 4 HOH A 65 665 65 HOH HOH . 
D 4 HOH A 66 666 66 HOH HOH . 
D 4 HOH A 67 667 67 HOH HOH . 
D 4 HOH A 68 668 68 HOH HOH . 
D 4 HOH A 69 669 69 HOH HOH . 
D 4 HOH A 70 670 70 HOH HOH . 
D 4 HOH A 71 671 71 HOH HOH . 
D 4 HOH A 72 672 72 HOH HOH . 
D 4 HOH A 73 673 73 HOH HOH . 
D 4 HOH A 74 674 74 HOH HOH . 
D 4 HOH A 75 675 75 HOH HOH . 
D 4 HOH A 76 676 76 HOH HOH . 
D 4 HOH A 77 677 77 HOH HOH . 
D 4 HOH A 78 678 78 HOH HOH . 
D 4 HOH A 79 679 79 HOH HOH . 
D 4 HOH A 80 680 80 HOH HOH . 
D 4 HOH A 81 681 81 HOH HOH . 
D 4 HOH A 82 682 82 HOH HOH . 
D 4 HOH A 83 683 83 HOH HOH . 
D 4 HOH A 84 684 84 HOH HOH . 
D 4 HOH A 85 685 85 HOH HOH . 
D 4 HOH A 86 686 86 HOH HOH . 
D 4 HOH A 87 687 87 HOH HOH . 
D 4 HOH A 88 688 88 HOH HOH . 
D 4 HOH A 89 689 89 HOH HOH . 
D 4 HOH A 90 690 90 HOH HOH . 
D 4 HOH A 91 691 91 HOH HOH . 
D 4 HOH A 92 692 92 HOH HOH . 
D 4 HOH A 93 693 93 HOH HOH . 
D 4 HOH A 94 694 94 HOH HOH . 
D 4 HOH A 95 695 95 HOH HOH . 
D 4 HOH A 96 696 96 HOH HOH . 
D 4 HOH A 97 697 97 HOH HOH . 
D 4 HOH A 98 698 98 HOH HOH . 
D 4 HOH A 99 699 99 HOH HOH . 
D 4 HOH A 100 700 100 HOH HOH . 
D 4 HOH A 101 701 101 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA 1SL . . . B 2 -26.311 -22.115 -36.916 1 49.76 ? CAA 1SL 501 A 1 
HETATM 2 C CAK 1SL . . . B 2 -27.016 -21.41 -38.089 1 49.21 ? CAK 1SL 501 A 1 
HETATM 3 C CAX 1SL . . . B 2 -26.25 -21.524 -39.415 1 40.88 ? CAX 1SL 501 A 1 
HETATM 4 C CAL 1SL . . . B 2 -27.152 -22.184 -40.452 1 38.34 ? CAL 1SL 501 A 1 
HETATM 5 C CAB 1SL . . . B 2 -28.175 -21.184 -40.995 1 43.35 ? CAB 1SL 501 A 1 
HETATM 6 O OAS 1SL . . . B 2 -25.918 -20.206 -39.878 1 38.42 ? OAS 1SL 501 A 1 
HETATM 7 C CAZ 1SL . . . B 2 -24.502 -19.977 -39.962 1 37.21 ? CAZ 1SL 501 A 1 
HETATM 8 C CBA 1SL . . . B 2 -24.215 -18.479 -39.824 1 35.96 ? CBA 1SL 501 A 1 
HETATM 9 N NAR 1SL . . . B 2 -24.889 -17.758 -40.913 1 32.12 ? NAR 1SL 501 A 1 
HETATM 10 C CAT 1SL . . . B 2 -25.48 -16.583 -40.758 1 28.7 ? CAT 1SL 501 A 1 
HETATM 11 C CAC 1SL . . . B 2 -25.954 -15.935 -42.056 1 27.8 ? CAC 1SL 501 A 1 
HETATM 12 O OAD 1SL . . . B 2 -25.598 -16.017 -39.678 1 30.67 ? OAD 1SL 501 A 1 
HETATM 13 C CAO 1SL . . . B 2 -23.803 -20.726 -38.84 1 37.49 ? CAO 1SL 501 A 1 
HETATM 14 C CAV 1SL . . . B 2 -22.4 -20.25 -38.519 1 36.89 ? CAV 1SL 501 A 1 
HETATM 15 C CAU 1SL . . . B 2 -21.498 -21.28 -37.852 1 40.33 ? CAU 1SL 501 A 1 
HETATM 16 O OAG 1SL . . . B 2 -20.398 -20.904 -37.371 1 40.83 ? OAG 1SL 501 A 1 
HETATM 17 O OAE 1SL . . . B 2 -22.001 -22.421 -37.722 1 39.67 ? OAE 1SL 501 A 1 
HETATM 18 C CAH 1SL . . . B 2 -21.845 -19.199 -39.226 1 34.76 ? CAH 1SL 501 A 1 
HETATM 19 C CAY 1SL . . . B 2 -22.722 -18.205 -39.985 1 38.74 ? CAY 1SL 501 A 1 
HETATM 20 N NBB 1SL . . . B 2 -22.331 -16.87 -39.52 1 42.46 ? NBB 1SL 501 A 1 
HETATM 21 C CAI 1SL . . . B 2 -21.535 -16.704 -38.475 1 37.07 ? CAI 1SL 501 A 1 
HETATM 22 N NAQ 1SL . . . B 2 -22.631 -15.789 -40.045 1 38.41 ? NAQ 1SL 501 A 1 
HETATM 23 N NAP 1SL . . . B 2 -22.093 -14.875 -39.412 1 40.1 ? NAP 1SL 501 A 1 
HETATM 24 C CAW 1SL . . . B 2 -21.38 -15.399 -38.405 1 42.77 ? CAW 1SL 501 A 1 
HETATM 25 C CAN 1SL . . . B 2 -20.524 -14.651 -37.381 1 41.33 ? CAN 1SL 501 A 1 
HETATM 26 C CAM 1SL . . . B 2 -19.676 -15.562 -36.491 1 41.25 ? CAM 1SL 501 A 1 
HETATM 27 C CAJ 1SL . . . B 2 -18.949 -14.676 -35.473 1 40.5 ? CAJ 1SL 501 A 1 
HETATM 28 O OAF 1SL . . . B 2 -18.198 -15.46 -34.554 1 36.45 ? OAF 1SL 501 A 1 
#
_model_server_stats.io_time_ms              42 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           28 
#