data_4KS4 # _model_server_result.job_id 3bc6byDKwoezV2lnSjEmCg _model_server_result.datetime_utc '2024-11-16 16:18:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ks4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 4KS4 # _exptl.entry_id 4KS4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 394.465 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(3S,4R,5R)-4-(acetylamino)-3-{4-[(1R)-1-hydroxypropyl]-1H-1,2,3-triazol-1-yl}-5-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4KS4 _cell.length_a 90.68 _cell.length_b 90.68 _cell.length_c 107.998 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4KS4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_975 -x+4,-y+2,z -1 0 0 0 -1 0 0 0 1 362.72 181.36 0 3 'crystal symmetry operation' 3_845 -y+3,x-1,z 0 -1 0 1 0 0 0 0 1 272.04 -90.68 0 4 'crystal symmetry operation' 4_685 y+1,-x+3,z 0 1 0 -1 0 0 0 0 1 90.68 272.04 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 10 A CYS 92 1_555 A SG CYS 337 A CYS 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 A SG CYS 42 A CYS 124 1_555 A SG CYS 47 A CYS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf3 A SG CYS 102 A CYS 183 1_555 A SG CYS 149 A CYS 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 A SG CYS 151 A CYS 232 1_555 A SG CYS 156 A CYS 237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf5 A SG CYS 197 A CYS 278 1_555 A SG CYS 210 A CYS 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf6 A SG CYS 199 A CYS 280 1_555 A SG CYS 208 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf7 A SG CYS 236 A CYS 318 1_555 A SG CYS 255 A CYS 337 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf8 A SG CYS 341 A CYS 421 1_555 A SG CYS 366 A CYS 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc1 A O ASP 212 A ASP 293 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc2 A O GLY 216 A GLY 297 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.006 ? metalc ? metalc3 A OD1 ASP 242 A ASP 324 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc4 A O TYR 264 A TYR 347 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc5 C CA CA . A CA 502 1_555 D O HOH . A HOH 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? # _chem_comp.formula 'C19 H30 N4 O5' _chem_comp.formula_weight 394.465 _chem_comp.id 1SN _chem_comp.mon_nstd_flag . _chem_comp.name '(3S,4R,5R)-4-(acetylamino)-3-{4-[(1R)-1-hydroxypropyl]-1H-1,2,3-triazol-1-yl}-5-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAG CAT 1SN doub 1 n n NAO NAP 1SN doub 2 n y NAO CAV 1SN sing 3 n y NAP NBB 1SN sing 4 n y CAT CAU 1SN sing 5 n n CAT OAF 1SN sing 6 n n CAA CAK 1SN sing 7 n n CAU CAI 1SN doub 8 n n CAU CAN 1SN sing 9 n n CAI CAY 1SN sing 10 n n CAN CAZ 1SN sing 11 n n CAV CAW 1SN sing 12 n n CAV CAJ 1SN doub 13 n y NBB CAY 1SN sing 14 n n NBB CAJ 1SN sing 15 n y CAW CAK 1SN sing 16 n n CAW OAH 1SN sing 17 n n OAE CAS 1SN doub 18 n n CAY CBA 1SN sing 19 n n CBA CAZ 1SN sing 20 n n CBA NAQ 1SN sing 21 n n CAZ OAR 1SN sing 22 n n OAR CAX 1SN sing 23 n n CAS NAQ 1SN sing 24 n n CAS CAD 1SN sing 25 n n CAX CAL 1SN sing 26 n n CAX CAM 1SN sing 27 n n CAB CAL 1SN sing 28 n n CAC CAM 1SN sing 29 n n CAB H1 1SN sing 30 n n CAB H2 1SN sing 31 n n CAB H3 1SN sing 32 n n CAL H4 1SN sing 33 n n CAL H5 1SN sing 34 n n CAX H6 1SN sing 35 n n CAM H7 1SN sing 36 n n CAM H8 1SN sing 37 n n CAC H9 1SN sing 38 n n CAC H10 1SN sing 39 n n CAC H11 1SN sing 40 n n CAZ H12 1SN sing 41 n n CBA H13 1SN sing 42 n n NAQ H14 1SN sing 43 n n CAD H15 1SN sing 44 n n CAD H16 1SN sing 45 n n CAD H17 1SN sing 46 n n CAN H18 1SN sing 47 n n CAN H19 1SN sing 48 n n OAF H21 1SN sing 49 n n CAI H22 1SN sing 50 n n CAY H24 1SN sing 51 n n CAJ H25 1SN sing 52 n n CAW H26 1SN sing 53 n n CAK H27 1SN sing 54 n n CAK H28 1SN sing 55 n n CAA H29 1SN sing 56 n n CAA H30 1SN sing 57 n n CAA H31 1SN sing 58 n n OAH H32 1SN sing 59 n n # _atom_sites.entry_id 4KS4 _atom_sites.fract_transf_matrix[1][1] 0.011028 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011028 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009259 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1SN A 1 501 1 1SN 1SN . C 3 CA A 1 502 1 CA CA . D 4 HOH A 1 601 1 HOH HOH . D 4 HOH A 2 602 2 HOH HOH . D 4 HOH A 3 603 3 HOH HOH . D 4 HOH A 4 604 4 HOH HOH . D 4 HOH A 5 605 5 HOH HOH . D 4 HOH A 6 606 6 HOH HOH . D 4 HOH A 7 607 7 HOH HOH . D 4 HOH A 8 608 8 HOH HOH . D 4 HOH A 9 609 9 HOH HOH . D 4 HOH A 10 610 10 HOH HOH . D 4 HOH A 11 611 11 HOH HOH . D 4 HOH A 12 612 12 HOH HOH . D 4 HOH A 13 613 13 HOH HOH . D 4 HOH A 14 614 14 HOH HOH . D 4 HOH A 15 615 15 HOH HOH . D 4 HOH A 16 616 16 HOH HOH . D 4 HOH A 17 617 17 HOH HOH . D 4 HOH A 18 618 18 HOH HOH . D 4 HOH A 19 619 19 HOH HOH . D 4 HOH A 20 620 20 HOH HOH . D 4 HOH A 21 621 21 HOH HOH . D 4 HOH A 22 622 22 HOH HOH . D 4 HOH A 23 623 23 HOH HOH . D 4 HOH A 24 624 24 HOH HOH . D 4 HOH A 25 625 25 HOH HOH . D 4 HOH A 26 626 26 HOH HOH . D 4 HOH A 27 627 27 HOH HOH . D 4 HOH A 28 628 28 HOH HOH . D 4 HOH A 29 629 29 HOH HOH . D 4 HOH A 30 630 30 HOH HOH . D 4 HOH A 31 631 31 HOH HOH . D 4 HOH A 32 632 32 HOH HOH . D 4 HOH A 33 633 33 HOH HOH . D 4 HOH A 34 634 34 HOH HOH . D 4 HOH A 35 635 35 HOH HOH . D 4 HOH A 36 636 36 HOH HOH . D 4 HOH A 37 637 37 HOH HOH . D 4 HOH A 38 638 38 HOH HOH . D 4 HOH A 39 639 39 HOH HOH . D 4 HOH A 40 640 40 HOH HOH . D 4 HOH A 41 641 41 HOH HOH . D 4 HOH A 42 642 42 HOH HOH . D 4 HOH A 43 643 43 HOH HOH . D 4 HOH A 44 644 44 HOH HOH . D 4 HOH A 45 645 45 HOH HOH . D 4 HOH A 46 646 46 HOH HOH . D 4 HOH A 47 647 47 HOH HOH . D 4 HOH A 48 648 48 HOH HOH . D 4 HOH A 49 649 49 HOH HOH . D 4 HOH A 50 650 50 HOH HOH . D 4 HOH A 51 651 51 HOH HOH . D 4 HOH A 52 652 52 HOH HOH . D 4 HOH A 53 653 53 HOH HOH . D 4 HOH A 54 654 54 HOH HOH . D 4 HOH A 55 655 55 HOH HOH . D 4 HOH A 56 656 56 HOH HOH . D 4 HOH A 57 657 57 HOH HOH . D 4 HOH A 58 658 58 HOH HOH . D 4 HOH A 59 659 59 HOH HOH . D 4 HOH A 60 660 60 HOH HOH . D 4 HOH A 61 661 61 HOH HOH . D 4 HOH A 62 662 62 HOH HOH . D 4 HOH A 63 663 63 HOH HOH . D 4 HOH A 64 664 64 HOH HOH . D 4 HOH A 65 665 65 HOH HOH . D 4 HOH A 66 666 66 HOH HOH . D 4 HOH A 67 667 67 HOH HOH . D 4 HOH A 68 668 68 HOH HOH . D 4 HOH A 69 669 69 HOH HOH . D 4 HOH A 70 670 70 HOH HOH . D 4 HOH A 71 671 71 HOH HOH . D 4 HOH A 72 672 72 HOH HOH . D 4 HOH A 73 673 73 HOH HOH . D 4 HOH A 74 674 74 HOH HOH . D 4 HOH A 75 675 75 HOH HOH . D 4 HOH A 76 676 76 HOH HOH . D 4 HOH A 77 677 77 HOH HOH . D 4 HOH A 78 678 78 HOH HOH . D 4 HOH A 79 679 79 HOH HOH . D 4 HOH A 80 680 80 HOH HOH . D 4 HOH A 81 681 81 HOH HOH . D 4 HOH A 82 682 82 HOH HOH . D 4 HOH A 83 683 83 HOH HOH . D 4 HOH A 84 684 84 HOH HOH . D 4 HOH A 85 685 85 HOH HOH . D 4 HOH A 86 686 86 HOH HOH . D 4 HOH A 87 687 87 HOH HOH . D 4 HOH A 88 688 88 HOH HOH . D 4 HOH A 89 689 89 HOH HOH . D 4 HOH A 90 690 90 HOH HOH . D 4 HOH A 91 691 91 HOH HOH . D 4 HOH A 92 692 92 HOH HOH . D 4 HOH A 93 693 93 HOH HOH . D 4 HOH A 94 694 94 HOH HOH . D 4 HOH A 95 695 95 HOH HOH . D 4 HOH A 96 696 96 HOH HOH . D 4 HOH A 97 697 97 HOH HOH . D 4 HOH A 98 698 98 HOH HOH . D 4 HOH A 99 699 99 HOH HOH . D 4 HOH A 100 700 100 HOH HOH . D 4 HOH A 101 701 101 HOH HOH . D 4 HOH A 102 702 102 HOH HOH . D 4 HOH A 103 703 103 HOH HOH . D 4 HOH A 104 704 104 HOH HOH . D 4 HOH A 105 705 105 HOH HOH . D 4 HOH A 106 706 106 HOH HOH . D 4 HOH A 107 707 107 HOH HOH . D 4 HOH A 108 708 108 HOH HOH . D 4 HOH A 109 709 109 HOH HOH . D 4 HOH A 110 710 110 HOH HOH . D 4 HOH A 111 711 111 HOH HOH . D 4 HOH A 112 712 112 HOH HOH . D 4 HOH A 113 713 113 HOH HOH . D 4 HOH A 114 714 114 HOH HOH . D 4 HOH A 115 715 115 HOH HOH . D 4 HOH A 116 716 116 HOH HOH . D 4 HOH A 117 717 117 HOH HOH . D 4 HOH A 118 718 118 HOH HOH . D 4 HOH A 119 719 119 HOH HOH . D 4 HOH A 120 720 120 HOH HOH . D 4 HOH A 121 721 121 HOH HOH . D 4 HOH A 122 722 122 HOH HOH . D 4 HOH A 123 723 123 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAB 1SN . . . B 2 210.17 71.605 -123.781 1 10.76 ? CAB 1SN 501 A 1 HETATM 2 C CAL 1SN . . . B 2 209.889 70.233 -123.168 1 11.13 ? CAL 1SN 501 A 1 HETATM 3 C CAX 1SN . . . B 2 208.616 69.658 -123.785 1 18.7 ? CAX 1SN 501 A 1 HETATM 4 C CAM 1SN . . . B 2 207.695 69.11 -122.693 1 12.17 ? CAM 1SN 501 A 1 HETATM 5 C CAC 1SN . . . B 2 207.723 67.573 -122.763 1 13.32 ? CAC 1SN 501 A 1 HETATM 6 O OAR 1SN . . . B 2 208.027 70.67 -124.615 1 15.31 ? OAR 1SN 501 A 1 HETATM 7 C CAZ 1SN . . . B 2 206.61 70.631 -124.673 1 13.62 ? CAZ 1SN 501 A 1 HETATM 8 C CBA 1SN . . . B 2 206.16 72.07 -124.923 1 14.06 ? CBA 1SN 501 A 1 HETATM 9 N NAQ 1SN . . . B 2 206.665 72.893 -123.82 1 14.79 ? NAQ 1SN 501 A 1 HETATM 10 C CAS 1SN . . . B 2 207.253 74.076 -124.019 1 17.47 ? CAS 1SN 501 A 1 HETATM 11 C CAD 1SN . . . B 2 207.724 74.78 -122.746 1 10.31 ? CAD 1SN 501 A 1 HETATM 12 O OAE 1SN . . . B 2 207.419 74.593 -125.124 1 17.74 ? OAE 1SN 501 A 1 HETATM 13 C CAN 1SN . . . B 2 206.207 69.762 -125.853 1 11.81 ? CAN 1SN 501 A 1 HETATM 14 C CAU 1SN . . . B 2 204.71 69.902 -126.12 1 14.33 ? CAU 1SN 501 A 1 HETATM 15 C CAT 1SN . . . B 2 203.881 68.703 -126.559 1 15.3 ? CAT 1SN 501 A 1 HETATM 16 O OAG 1SN . . . B 2 202.995 68.894 -127.426 1 18.23 ? OAG 1SN 501 A 1 HETATM 17 O OAF 1SN . . . B 2 204.13 67.612 -126.006 1 16.91 ? OAF 1SN 501 A 1 HETATM 18 C CAI 1SN . . . B 2 204.064 71.11 -125.907 1 16.71 ? CAI 1SN 501 A 1 HETATM 19 C CAY 1SN . . . B 2 204.643 72.187 -124.99 1 18.45 ? CAY 1SN 501 A 1 HETATM 20 N NBB 1SN . . . B 2 204.284 73.485 -125.564 1 21.4 ? NBB 1SN 501 A 1 HETATM 21 C CAJ 1SN . . . B 2 204.238 74.605 -124.871 1 21.71 ? CAJ 1SN 501 A 1 HETATM 22 N NAP 1SN . . . B 2 203.992 73.658 -126.751 1 20.41 ? NAP 1SN 501 A 1 HETATM 23 N NAO 1SN . . . B 2 203.734 74.847 -126.952 1 24.57 ? NAO 1SN 501 A 1 HETATM 24 C CAV 1SN . . . B 2 203.876 75.481 -125.79 1 29.19 ? CAV 1SN 501 A 1 HETATM 25 C CAW 1SN . . . B 2 203.663 76.978 -125.534 1 27.15 ? CAW 1SN 501 A 1 HETATM 26 C CAK 1SN . . . B 2 202.184 77.246 -125.251 1 17.14 ? CAK 1SN 501 A 1 HETATM 27 C CAA 1SN . . . B 2 201.333 76.808 -126.437 1 22.09 ? CAA 1SN 501 A 1 HETATM 28 O OAH 1SN . . . B 2 204.447 77.388 -124.401 1 29.55 ? OAH 1SN 501 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 28 #