data_4KSG # _model_server_result.job_id whwUxOGICxj7Rh0rLn8Vsw _model_server_result.datetime_utc '2024-10-19 01:34:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ksg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4KSG # _exptl.entry_id 4KSG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 448.496 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[(1S,5R,6R)-6-amino-1-methyl-3-azabicyclo[3.2.0]hept-3-yl]-6-fluoro-N-methyl-2-[(2-methylpyrimidin-5-yl)oxy]-9H-pyrimido[4,5-b]indol-8-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4KSG _cell.length_a 54.68 _cell.length_b 58.66 _cell.length_c 65.99 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4KSG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H25 F N8 O' _chem_comp.formula_weight 448.496 _chem_comp.id 920 _chem_comp.mon_nstd_flag . _chem_comp.name 4-[(1S,5R,6R)-6-amino-1-methyl-3-azabicyclo[3.2.0]hept-3-yl]-6-fluoro-N-methyl-2-[(2-methylpyrimidin-5-yl)oxy]-9H-pyrimido[4,5-b]indol-8-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C33 N32 920 sing 1 n n F31 C6 920 sing 2 n n C1 C6 920 doub 3 n y C1 C2 920 sing 4 n y C6 C5 920 sing 5 n y N32 C2 920 sing 6 n n C2 C3 920 doub 7 n y C5 C4 920 doub 8 n y C3 C4 920 sing 9 n y C3 N7 920 sing 10 n y C4 C9 920 sing 11 n y N7 C8 920 sing 12 n y C9 C8 920 doub 13 n y C9 C10 920 sing 14 n y C8 N13 920 sing 15 n y C26 N22 920 sing 16 n n C26 C25 920 sing 17 n n C10 N22 920 sing 18 n n C10 N11 920 doub 19 n y N22 C23 920 sing 20 n n N13 C12 920 doub 21 n y C23 C24 920 sing 22 n n C25 C24 920 sing 23 n n C25 C28 920 sing 24 n n N11 C12 920 sing 25 n y C12 O14 920 sing 26 n n C24 C30 920 sing 27 n n C24 C27 920 sing 28 n n O14 C15 920 sing 29 n n C28 N29 920 sing 30 n n C28 C27 920 sing 31 n n C20 C15 920 doub 32 n y C20 N19 920 sing 33 n y C15 C16 920 sing 34 n y N19 C18 920 doub 35 n y C16 N17 920 doub 36 n y C18 N17 920 sing 37 n y C18 C21 920 sing 38 n n C1 H1 920 sing 39 n n C5 H2 920 sing 40 n n C26 H3 920 sing 41 n n C26 H4 920 sing 42 n n C25 H5 920 sing 43 n n C28 H6 920 sing 44 n n N29 H7 920 sing 45 n n N29 H8 920 sing 46 n n C27 H10 920 sing 47 n n C27 H11 920 sing 48 n n C30 H12 920 sing 49 n n C30 H13 920 sing 50 n n C30 H14 920 sing 51 n n C23 H15 920 sing 52 n n C23 H16 920 sing 53 n n N7 H17 920 sing 54 n n N32 H18 920 sing 55 n n C33 H19 920 sing 56 n n C33 H20 920 sing 57 n n C33 H21 920 sing 58 n n C20 H22 920 sing 59 n n C21 H23 920 sing 60 n n C21 H24 920 sing 61 n n C21 H25 920 sing 62 n n C16 H26 920 sing 63 n n # _atom_sites.entry_id 4KSG _atom_sites.fract_transf_matrix[1][1] 0.018288 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017047 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015154 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 920 A 1 301 1 920 920 . C 3 TBU A 1 302 1 TBU TBU . D 4 HOH A 1 401 1 HOH HOH . D 4 HOH A 2 402 2 HOH HOH . D 4 HOH A 3 403 3 HOH HOH . D 4 HOH A 4 404 4 HOH HOH . D 4 HOH A 5 405 5 HOH HOH . D 4 HOH A 6 406 6 HOH HOH . D 4 HOH A 7 407 7 HOH HOH . D 4 HOH A 8 408 8 HOH HOH . D 4 HOH A 9 409 9 HOH HOH . D 4 HOH A 10 410 10 HOH HOH . D 4 HOH A 11 411 11 HOH HOH . D 4 HOH A 12 412 12 HOH HOH . D 4 HOH A 13 413 13 HOH HOH . D 4 HOH A 14 414 14 HOH HOH . D 4 HOH A 15 415 15 HOH HOH . D 4 HOH A 16 416 16 HOH HOH . D 4 HOH A 17 417 17 HOH HOH . D 4 HOH A 18 418 18 HOH HOH . D 4 HOH A 19 419 19 HOH HOH . D 4 HOH A 20 420 20 HOH HOH . D 4 HOH A 21 421 21 HOH HOH . D 4 HOH A 22 422 22 HOH HOH . D 4 HOH A 23 423 23 HOH HOH . D 4 HOH A 24 424 24 HOH HOH . D 4 HOH A 25 425 25 HOH HOH . D 4 HOH A 26 426 26 HOH HOH . D 4 HOH A 27 427 27 HOH HOH . D 4 HOH A 28 428 28 HOH HOH . D 4 HOH A 29 429 29 HOH HOH . D 4 HOH A 30 430 30 HOH HOH . D 4 HOH A 31 431 31 HOH HOH . D 4 HOH A 32 432 32 HOH HOH . D 4 HOH A 33 433 33 HOH HOH . D 4 HOH A 34 434 34 HOH HOH . D 4 HOH A 35 435 35 HOH HOH . D 4 HOH A 36 436 36 HOH HOH . D 4 HOH A 37 437 37 HOH HOH . D 4 HOH A 38 438 38 HOH HOH . D 4 HOH A 39 439 39 HOH HOH . D 4 HOH A 40 440 40 HOH HOH . D 4 HOH A 41 441 41 HOH HOH . D 4 HOH A 42 442 42 HOH HOH . D 4 HOH A 43 443 43 HOH HOH . D 4 HOH A 44 444 44 HOH HOH . D 4 HOH A 45 445 45 HOH HOH . D 4 HOH A 46 446 46 HOH HOH . D 4 HOH A 47 447 47 HOH HOH . D 4 HOH A 48 448 48 HOH HOH . D 4 HOH A 49 449 49 HOH HOH . D 4 HOH A 50 450 50 HOH HOH . D 4 HOH A 51 451 51 HOH HOH . D 4 HOH A 52 452 52 HOH HOH . D 4 HOH A 53 453 53 HOH HOH . D 4 HOH A 54 454 54 HOH HOH . D 4 HOH A 55 455 55 HOH HOH . D 4 HOH A 56 456 56 HOH HOH . D 4 HOH A 57 457 57 HOH HOH . D 4 HOH A 58 458 58 HOH HOH . D 4 HOH A 59 459 59 HOH HOH . D 4 HOH A 60 460 60 HOH HOH . D 4 HOH A 61 461 61 HOH HOH . D 4 HOH A 62 462 62 HOH HOH . D 4 HOH A 63 463 63 HOH HOH . D 4 HOH A 64 464 64 HOH HOH . D 4 HOH A 65 465 65 HOH HOH . D 4 HOH A 66 466 66 HOH HOH . D 4 HOH A 67 467 67 HOH HOH . D 4 HOH A 68 468 68 HOH HOH . D 4 HOH A 69 469 69 HOH HOH . D 4 HOH A 70 470 70 HOH HOH . D 4 HOH A 71 471 71 HOH HOH . D 4 HOH A 72 472 72 HOH HOH . D 4 HOH A 73 473 73 HOH HOH . D 4 HOH A 74 474 74 HOH HOH . D 4 HOH A 75 475 75 HOH HOH . D 4 HOH A 76 476 76 HOH HOH . D 4 HOH A 77 477 77 HOH HOH . D 4 HOH A 78 478 78 HOH HOH . D 4 HOH A 79 479 79 HOH HOH . D 4 HOH A 80 480 80 HOH HOH . D 4 HOH A 81 481 81 HOH HOH . D 4 HOH A 82 482 82 HOH HOH . D 4 HOH A 83 483 83 HOH HOH . D 4 HOH A 84 484 84 HOH HOH . D 4 HOH A 85 485 85 HOH HOH . D 4 HOH A 86 486 86 HOH HOH . D 4 HOH A 87 487 87 HOH HOH . D 4 HOH A 88 488 88 HOH HOH . D 4 HOH A 89 489 89 HOH HOH . D 4 HOH A 90 490 90 HOH HOH . D 4 HOH A 91 491 91 HOH HOH . D 4 HOH A 92 492 92 HOH HOH . D 4 HOH A 93 493 93 HOH HOH . D 4 HOH A 94 494 94 HOH HOH . D 4 HOH A 95 495 95 HOH HOH . D 4 HOH A 96 496 96 HOH HOH . D 4 HOH A 97 497 97 HOH HOH . D 4 HOH A 98 498 98 HOH HOH . D 4 HOH A 99 499 99 HOH HOH . D 4 HOH A 100 500 100 HOH HOH . D 4 HOH A 101 501 101 HOH HOH . D 4 HOH A 102 502 102 HOH HOH . D 4 HOH A 103 503 103 HOH HOH . D 4 HOH A 104 504 104 HOH HOH . D 4 HOH A 105 505 105 HOH HOH . D 4 HOH A 106 506 106 HOH HOH . D 4 HOH A 107 507 107 HOH HOH . D 4 HOH A 108 508 108 HOH HOH . D 4 HOH A 109 509 109 HOH HOH . D 4 HOH A 110 510 110 HOH HOH . D 4 HOH A 111 511 111 HOH HOH . D 4 HOH A 112 512 112 HOH HOH . D 4 HOH A 113 513 113 HOH HOH . D 4 HOH A 114 514 114 HOH HOH . D 4 HOH A 115 515 115 HOH HOH . D 4 HOH A 116 516 116 HOH HOH . D 4 HOH A 117 517 117 HOH HOH . D 4 HOH A 118 518 118 HOH HOH . D 4 HOH A 119 519 119 HOH HOH . D 4 HOH A 120 520 120 HOH HOH . D 4 HOH A 121 521 121 HOH HOH . D 4 HOH A 122 522 122 HOH HOH . D 4 HOH A 123 523 123 HOH HOH . D 4 HOH A 124 524 124 HOH HOH . D 4 HOH A 125 525 125 HOH HOH . D 4 HOH A 126 526 126 HOH HOH . D 4 HOH A 127 527 127 HOH HOH . D 4 HOH A 128 528 128 HOH HOH . D 4 HOH A 129 529 129 HOH HOH . D 4 HOH A 130 530 130 HOH HOH . D 4 HOH A 131 531 131 HOH HOH . D 4 HOH A 132 532 132 HOH HOH . D 4 HOH A 133 533 133 HOH HOH . D 4 HOH A 134 534 134 HOH HOH . D 4 HOH A 135 535 135 HOH HOH . D 4 HOH A 136 536 136 HOH HOH . D 4 HOH A 137 537 137 HOH HOH . D 4 HOH A 138 538 138 HOH HOH . D 4 HOH A 139 539 139 HOH HOH . D 4 HOH A 140 540 140 HOH HOH . D 4 HOH A 141 541 141 HOH HOH . D 4 HOH A 142 542 142 HOH HOH . D 4 HOH A 143 543 143 HOH HOH . D 4 HOH A 144 544 144 HOH HOH . D 4 HOH A 145 545 145 HOH HOH . D 4 HOH A 146 546 146 HOH HOH . D 4 HOH A 147 547 147 HOH HOH . D 4 HOH A 148 548 148 HOH HOH . D 4 HOH A 149 549 149 HOH HOH . D 4 HOH A 150 550 150 HOH HOH . D 4 HOH A 151 551 151 HOH HOH . D 4 HOH A 152 552 152 HOH HOH . D 4 HOH A 153 553 153 HOH HOH . D 4 HOH A 154 554 154 HOH HOH . D 4 HOH A 155 555 155 HOH HOH . D 4 HOH A 156 556 156 HOH HOH . D 4 HOH A 157 557 157 HOH HOH . D 4 HOH A 158 558 158 HOH HOH . D 4 HOH A 159 559 159 HOH HOH . D 4 HOH A 160 560 160 HOH HOH . D 4 HOH A 161 561 161 HOH HOH . D 4 HOH A 162 562 162 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F F31 920 . . . B 2 10.193 -1.193 10.269 1 13.65 ? F31 920 301 A 1 HETATM 2 C C6 920 . . . B 2 10.945 -2.075 10.961 1 12.73 ? C6 920 301 A 1 HETATM 3 C C1 920 . . . B 2 12.301 -2.2 10.604 1 12.47 ? C1 920 301 A 1 HETATM 4 C C5 920 . . . B 2 10.348 -2.846 11.985 1 12.74 ? C5 920 301 A 1 HETATM 5 C C4 920 . . . B 2 11.144 -3.773 12.663 1 12.4 ? C4 920 301 A 1 HETATM 6 C C9 920 . . . B 2 10.929 -4.738 13.759 1 12.35 ? C9 920 301 A 1 HETATM 7 C C10 920 . . . B 2 9.793 -5.203 14.61 1 12.53 ? C10 920 301 A 1 HETATM 8 N N22 920 . . . B 2 8.5 -4.691 14.665 1 12.82 ? N22 920 301 A 1 HETATM 9 C C26 920 . . . B 2 8.162 -3.316 14.315 1 13.07 ? C26 920 301 A 1 HETATM 10 C C25 920 . . . B 2 7.124 -2.982 15.399 1 13.4 ? C25 920 301 A 1 HETATM 11 C C28 920 . . . B 2 7.602 -2.356 16.714 1 13.71 ? C28 920 301 A 1 HETATM 12 N N29 920 . . . B 2 8.927 -1.75 16.757 1 14.35 ? N29 920 301 A 1 HETATM 13 C C27 920 . . . B 2 7.512 -3.729 17.377 1 13.94 ? C27 920 301 A 1 HETATM 14 C C24 920 . . . B 2 6.806 -4.274 16.13 1 13.38 ? C24 920 301 A 1 HETATM 15 C C30 920 . . . B 2 5.305 -4.488 16.349 1 13.84 ? C30 920 301 A 1 HETATM 16 C C23 920 . . . B 2 7.441 -5.417 15.352 1 13.16 ? C23 920 301 A 1 HETATM 17 N N11 920 . . . B 2 10.095 -6.171 15.512 1 12.35 ? N11 920 301 A 1 HETATM 18 C C12 920 . . . B 2 11.327 -6.728 15.63 1 12.62 ? C12 920 301 A 1 HETATM 19 N N13 920 . . . B 2 12.378 -6.345 14.894 1 12.26 ? N13 920 301 A 1 HETATM 20 C C8 920 . . . B 2 12.232 -5.397 13.961 1 12.28 ? C8 920 301 A 1 HETATM 21 N N7 920 . . . B 2 13.118 -4.867 13.11 1 12.04 ? N7 920 301 A 1 HETATM 22 C C3 920 . . . B 2 12.563 -3.931 12.314 1 12.31 ? C3 920 301 A 1 HETATM 23 C C2 920 . . . B 2 13.145 -3.116 11.245 1 12.22 ? C2 920 301 A 1 HETATM 24 N N32 920 . . . B 2 14.459 -3.324 10.976 1 12.32 ? N32 920 301 A 1 HETATM 25 C C33 920 . . . B 2 15.112 -2.796 9.791 1 11.95 ? C33 920 301 A 1 HETATM 26 O O14 920 . . . B 2 11.577 -7.719 16.525 1 13 ? O14 920 301 A 1 HETATM 27 C C15 920 . . . B 2 10.585 -8.305 17.258 1 13.15 ? C15 920 301 A 1 HETATM 28 C C20 920 . . . B 2 10.381 -9.68 17.189 1 13.53 ? C20 920 301 A 1 HETATM 29 N N19 920 . . . B 2 9.411 -10.219 17.954 1 13.76 ? N19 920 301 A 1 HETATM 30 C C18 920 . . . B 2 8.651 -9.439 18.762 1 13.91 ? C18 920 301 A 1 HETATM 31 C C21 920 . . . B 2 7.565 -10.054 19.609 1 14.43 ? C21 920 301 A 1 HETATM 32 N N17 920 . . . B 2 8.845 -8.105 18.834 1 14.03 ? N17 920 301 A 1 HETATM 33 C C16 920 . . . B 2 9.801 -7.527 18.099 1 13.67 ? C16 920 301 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 33 #