data_4KT5 # _model_server_result.job_id urFF1sxkHMPYHzS7uPaJmA _model_server_result.datetime_utc '2025-04-10 06:28:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4kt5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 4KT5 # _exptl.entry_id 4KT5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4KT5 _cell.length_a 83.188 _cell.length_b 121.212 _cell.length_c 84.831 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4KT5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 4 A SER 0 1_555 A N MSE 5 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale2 A C MSE 5 A MSE 1 1_555 A N ILE 6 A ILE 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 A C ILE 6 A ILE 2 1_555 A N MSE 7 A MSE 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale4 A C MSE 7 A MSE 3 1_555 A N LYS 8 A LYS 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale5 A C ASN 33 A ASN 29 1_555 A N MSE 34 A MSE 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale6 A C MSE 34 A MSE 30 1_555 A N ILE 35 A ILE 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale7 B C MSE 5 B MSE 1 1_555 B N ILE 6 B ILE 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale8 B C ILE 6 B ILE 2 1_555 B N MSE 7 B MSE 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale9 B C MSE 7 B MSE 3 1_555 B N LYS 8 B LYS 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale10 B C ASN 33 B ASN 29 1_555 B N MSE 34 B MSE 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale11 B C MSE 34 B MSE 30 1_555 B N ILE 35 B ILE 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 237 n n O1 HO1 PG4 sing 238 n n C1 C2 PG4 sing 239 n n C1 H11 PG4 sing 240 n n C1 H12 PG4 sing 241 n n C2 O2 PG4 sing 242 n n C2 H21 PG4 sing 243 n n C2 H22 PG4 sing 244 n n O2 C3 PG4 sing 245 n n C3 C4 PG4 sing 246 n n C3 H31 PG4 sing 247 n n C3 H32 PG4 sing 248 n n C4 O3 PG4 sing 249 n n C4 H41 PG4 sing 250 n n C4 H42 PG4 sing 251 n n O3 C5 PG4 sing 252 n n C5 C6 PG4 sing 253 n n C5 H51 PG4 sing 254 n n C5 H52 PG4 sing 255 n n C6 O4 PG4 sing 256 n n C6 H61 PG4 sing 257 n n C6 H62 PG4 sing 258 n n O4 C7 PG4 sing 259 n n C7 C8 PG4 sing 260 n n C7 H71 PG4 sing 261 n n C7 H72 PG4 sing 262 n n C8 O5 PG4 sing 263 n n C8 H81 PG4 sing 264 n n C8 H82 PG4 sing 265 n n O5 HO5 PG4 sing 266 n n # _atom_sites.entry_id 4KT5 _atom_sites.fract_transf_matrix[1][1] 0.012021 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00825 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011788 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 PG4 A 1 201 201 PG4 PG4 . E 3 PG4 B 1 201 201 PG4 PG4 . F 4 HOH A 1 301 301 HOH HOH . F 4 HOH A 2 302 302 HOH HOH . F 4 HOH A 3 303 303 HOH HOH . F 4 HOH A 4 304 304 HOH HOH . F 4 HOH A 5 305 305 HOH HOH . G 4 HOH B 1 301 301 HOH HOH . G 4 HOH B 2 302 302 HOH HOH . G 4 HOH B 3 303 303 HOH HOH . G 4 HOH B 4 304 304 HOH HOH . G 4 HOH B 5 305 305 HOH HOH . H 4 HOH C 1 201 201 HOH HOH . H 4 HOH C 2 202 202 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . D 3 -12.976 26.337 -22.23 1 45.72 ? O1 PG4 201 A 1 HETATM 2 C C1 PG4 . . . D 3 -12.863 27.646 -22.69 1 45.87 ? C1 PG4 201 A 1 HETATM 3 C C2 PG4 . . . D 3 -13.864 27.975 -23.754 1 44.38 ? C2 PG4 201 A 1 HETATM 4 O O2 PG4 . . . D 3 -13.89 29.34 -24.019 1 45.89 ? O2 PG4 201 A 1 HETATM 5 C C3 PG4 . . . D 3 -14.337 29.778 -25.262 1 44.85 ? C3 PG4 201 A 1 HETATM 6 C C4 PG4 . . . D 3 -14.221 31.264 -25.39 1 46.07 ? C4 PG4 201 A 1 HETATM 7 O O3 PG4 . . . D 3 -14.713 31.719 -26.603 1 50.03 ? O3 PG4 201 A 1 HETATM 8 C C5 PG4 . . . D 3 -15.271 32.991 -26.677 1 52.97 ? C5 PG4 201 A 1 HETATM 9 C C6 PG4 . . . D 3 -16.342 33.106 -27.727 1 55.55 ? C6 PG4 201 A 1 HETATM 10 O O4 PG4 . . . D 3 -17.166 34.2 -27.475 1 57.46 ? O4 PG4 201 A 1 HETATM 11 C C7 PG4 . . . D 3 -17.461 35.156 -28.445 1 54.34 ? C7 PG4 201 A 1 HETATM 12 C C8 PG4 . . . D 3 -18.26 36.301 -27.883 1 49.83 ? C8 PG4 201 A 1 HETATM 13 O O5 PG4 . . . D 3 -18.222 37.441 -28.683 1 46.46 ? O5 PG4 201 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 13 #