data_4KUM
#
_model_server_result.job_id            zG4_BvSPPGs5z9wxciG8dQ 
_model_server_result.datetime_utc      '2024-11-22 19:44:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4kum 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":901}' 
#
_entry.id    4KUM 
#
_exptl.entry_id    4KUM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4KUM 
_cell.length_a            123.864 
_cell.length_b            179.371 
_cell.length_c            235.054 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4KUM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     4KUM 
_atom_sites.fract_transf_matrix[1][1]    0.008073 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005575 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004254 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 FAD A 1 901 901 FAD FAD . 
D 4 GOL A 1 902 902 GOL GOL . 
E 5 THG A 1 903 903 THG THG . 
F 6 CL A 1 904 904 CL CL . 
G 7 HOH A 1 1001 1001 HOH HOH . 
G 7 HOH A 2 1002 1002 HOH HOH . 
G 7 HOH A 3 1003 1003 HOH HOH . 
G 7 HOH A 4 1004 1004 HOH HOH . 
G 7 HOH A 5 1005 1005 HOH HOH . 
G 7 HOH A 6 1006 1006 HOH HOH . 
G 7 HOH A 7 1007 1007 HOH HOH . 
G 7 HOH A 8 1008 1008 HOH HOH . 
G 7 HOH A 9 1009 1009 HOH HOH . 
G 7 HOH A 10 1010 1010 HOH HOH . 
G 7 HOH A 11 1011 1011 HOH HOH . 
G 7 HOH A 12 1012 1012 HOH HOH . 
G 7 HOH A 13 1013 1013 HOH HOH . 
G 7 HOH A 14 1014 1014 HOH HOH . 
G 7 HOH A 15 1015 1015 HOH HOH . 
G 7 HOH A 16 1016 1016 HOH HOH . 
G 7 HOH A 17 1017 1017 HOH HOH . 
G 7 HOH A 18 1018 1018 HOH HOH . 
G 7 HOH A 19 1019 1019 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . C 3 68.002 67.882 28.979 1 52.8 ? PA FAD 901 A 1 
HETATM 2 O O1A FAD . . . C 3 66.887 68.412 29.866 1 50.58 ? O1A FAD 901 A 1 
HETATM 3 O O2A FAD . . . C 3 69.367 67.575 29.596 1 52.05 ? O2A FAD 901 A 1 
HETATM 4 O O5B FAD . . . C 3 68.361 69.006 27.894 1 49.03 ? O5B FAD 901 A 1 
HETATM 5 C C5B FAD . . . C 3 67.612 70.208 27.805 1 46.64 ? C5B FAD 901 A 1 
HETATM 6 C C4B FAD . . . C 3 68.378 71.483 28.059 1 45.21 ? C4B FAD 901 A 1 
HETATM 7 O O4B FAD . . . C 3 67.427 72.542 27.807 1 43.61 ? O4B FAD 901 A 1 
HETATM 8 C C3B FAD . . . C 3 68.861 71.641 29.497 1 45.41 ? C3B FAD 901 A 1 
HETATM 9 O O3B FAD . . . C 3 70.276 71.971 29.538 1 44.6 ? O3B FAD 901 A 1 
HETATM 10 C C2B FAD . . . C 3 67.877 72.725 30.03 1 44.81 ? C2B FAD 901 A 1 
HETATM 11 O O2B FAD . . . C 3 68.27 73.508 31.18 1 37.79 ? O2B FAD 901 A 1 
HETATM 12 C C1B FAD . . . C 3 67.634 73.549 28.775 1 43.46 ? C1B FAD 901 A 1 
HETATM 13 N N9A FAD . . . C 3 66.515 74.499 28.793 1 45 ? N9A FAD 901 A 1 
HETATM 14 C C8A FAD . . . C 3 65.356 74.377 29.432 1 47.87 ? C8A FAD 901 A 1 
HETATM 15 N N7A FAD . . . C 3 64.591 75.49 29.247 1 50.7 ? N7A FAD 901 A 1 
HETATM 16 C C5A FAD . . . C 3 65.266 76.302 28.449 1 47.12 ? C5A FAD 901 A 1 
HETATM 17 C C6A FAD . . . C 3 65.03 77.599 27.868 1 51.06 ? C6A FAD 901 A 1 
HETATM 18 N N6A FAD . . . C 3 63.873 78.198 28.13 1 61.55 ? N6A FAD 901 A 1 
HETATM 19 N N1A FAD . . . C 3 65.959 78.174 27.11 1 53.07 ? N1A FAD 901 A 1 
HETATM 20 C C2A FAD . . . C 3 67.122 77.552 26.884 1 52.87 ? C2A FAD 901 A 1 
HETATM 21 N N3A FAD . . . C 3 67.397 76.347 27.401 1 51.24 ? N3A FAD 901 A 1 
HETATM 22 C C4A FAD . . . C 3 66.528 75.674 28.174 1 47.36 ? C4A FAD 901 A 1 
HETATM 23 N N1 FAD . . . C 3 69.452 58.175 32.103 1 59.91 ? N1 FAD 901 A 1 
HETATM 24 C C2 FAD . . . C 3 70.202 57.059 32.077 1 61.68 ? C2 FAD 901 A 1 
HETATM 25 O O2 FAD . . . C 3 70.498 56.528 30.978 1 62.85 ? O2 FAD 901 A 1 
HETATM 26 N N3 FAD . . . C 3 70.648 56.507 33.22 1 66.5 ? N3 FAD 901 A 1 
HETATM 27 C C4 FAD . . . C 3 70.407 57.009 34.436 1 59.98 ? C4 FAD 901 A 1 
HETATM 28 O O4 FAD . . . C 3 70.84 56.523 35.508 1 70.78 ? O4 FAD 901 A 1 
HETATM 29 C C4X FAD . . . C 3 69.589 58.191 34.537 1 60.71 ? C4X FAD 901 A 1 
HETATM 30 N N5 FAD . . . C 3 69.332 58.713 35.747 1 68.43 ? N5 FAD 901 A 1 
HETATM 31 C C5X FAD . . . C 3 68.617 59.829 35.84 1 67.12 ? C5X FAD 901 A 1 
HETATM 32 C C6 FAD . . . C 3 68.407 60.345 37.088 1 72.39 ? C6 FAD 901 A 1 
HETATM 33 C C7 FAD . . . C 3 67.666 61.495 37.234 1 76.52 ? C7 FAD 901 A 1 
HETATM 34 C C7M FAD . . . C 3 67.401 62.04 38.608 1 78.62 ? C7M FAD 901 A 1 
HETATM 35 C C8 FAD . . . C 3 67.12 62.159 36.037 1 81.04 ? C8 FAD 901 A 1 
HETATM 36 C C8M FAD . . . C 3 66.321 63.415 36.142 1 86.22 ? C8M FAD 901 A 1 
HETATM 37 C C9 FAD . . . C 3 67.348 61.645 34.78 1 79.55 ? C9 FAD 901 A 1 
HETATM 38 C C9A FAD . . . C 3 68.083 60.489 34.63 1 68.44 ? C9A FAD 901 A 1 
HETATM 39 N N10 FAD . . . C 3 68.337 59.943 33.365 1 62.23 ? N10 FAD 901 A 1 
HETATM 40 C C10 FAD . . . C 3 69.109 58.77 33.281 1 61.54 ? C10 FAD 901 A 1 
HETATM 41 C C1' FAD . . . C 3 67.818 60.532 32.133 1 60.4 ? C1' FAD 901 A 1 
HETATM 42 C C2' FAD . . . C 3 68.782 61.458 31.437 1 57.02 ? C2' FAD 901 A 1 
HETATM 43 O O2' FAD . . . C 3 69.358 62.335 32.412 1 54.96 ? O2' FAD 901 A 1 
HETATM 44 C C3' FAD . . . C 3 67.944 62.182 30.404 1 56.78 ? C3' FAD 901 A 1 
HETATM 45 O O3' FAD . . . C 3 67.152 61.241 29.663 1 56.96 ? O3' FAD 901 A 1 
HETATM 46 C C4' FAD . . . C 3 68.804 62.971 29.453 1 60.94 ? C4' FAD 901 A 1 
HETATM 47 O O4' FAD . . . C 3 69.966 63.439 30.163 1 62.35 ? O4' FAD 901 A 1 
HETATM 48 C C5' FAD . . . C 3 67.954 64.109 28.863 1 61.17 ? C5' FAD 901 A 1 
HETATM 49 O O5' FAD . . . C 3 68.603 64.72 27.728 1 59.08 ? O5' FAD 901 A 1 
HETATM 50 P P FAD . . . C 3 67.834 65.881 26.956 1 51.28 ? P FAD 901 A 1 
HETATM 51 O O1P FAD . . . C 3 68.859 66.696 26.181 1 44.54 ? O1P FAD 901 A 1 
HETATM 52 O O2P FAD . . . C 3 66.66 65.156 26.259 1 46.63 ? O2P FAD 901 A 1 
HETATM 53 O O3P FAD . . . C 3 67.277 66.672 28.225 1 41.95 ? O3P FAD 901 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           53 
#