data_4KW5 # _model_server_result.job_id s8xQqCb9UmJOFQwbuFXWJw _model_server_result.datetime_utc '2024-11-15 03:53:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4kw5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 4KW5 # _exptl.entry_id 4KW5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment TCA1 _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.55 _cell.angle_gamma 90 _cell.entry_id 4KW5 _cell.length_a 78.23 _cell.length_b 84.19 _cell.length_c 81.05 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4KW5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1 B,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 123 n n PA O2A FAD sing 124 n n PA O5B FAD sing 125 n n PA O3P FAD sing 126 n n O2A HOA2 FAD sing 127 n n O5B C5B FAD sing 128 n n C5B C4B FAD sing 129 n n C5B H51A FAD sing 130 n n C5B H52A FAD sing 131 n n C4B O4B FAD sing 132 n n C4B C3B FAD sing 133 n n C4B H4B FAD sing 134 n n O4B C1B FAD sing 135 n n C3B O3B FAD sing 136 n n C3B C2B FAD sing 137 n n C3B H3B FAD sing 138 n n O3B HO3A FAD sing 139 n n C2B O2B FAD sing 140 n n C2B C1B FAD sing 141 n n C2B H2B FAD sing 142 n n O2B HO2A FAD sing 143 n n C1B N9A FAD sing 144 n n C1B H1B FAD sing 145 n n N9A C8A FAD sing 146 n y N9A C4A FAD sing 147 n y C8A N7A FAD doub 148 n y C8A H8A FAD sing 149 n n N7A C5A FAD sing 150 n y C5A C6A FAD sing 151 n y C5A C4A FAD doub 152 n y C6A N6A FAD sing 153 n n C6A N1A FAD doub 154 n y N6A H61A FAD sing 155 n n N6A H62A FAD sing 156 n n N1A C2A FAD sing 157 n y C2A N3A FAD doub 158 n y C2A H2A FAD sing 159 n n N3A C4A FAD sing 160 n y N1 C2 FAD sing 161 n n N1 C10 FAD doub 162 n n C2 O2 FAD doub 163 n n C2 N3 FAD sing 164 n n N3 C4 FAD sing 165 n n N3 HN3 FAD sing 166 n n C4 O4 FAD doub 167 n n C4 C4X FAD sing 168 n n C4X N5 FAD doub 169 n n C4X C10 FAD sing 170 n n N5 C5X FAD sing 171 n n C5X C6 FAD doub 172 n y C5X C9A FAD sing 173 n y C6 C7 FAD sing 174 n y C6 H6 FAD sing 175 n n C7 C7M FAD sing 176 n n C7 C8 FAD doub 177 n y C7M HM71 FAD sing 178 n n C7M HM72 FAD sing 179 n n C7M HM73 FAD sing 180 n n C8 C8M FAD sing 181 n n C8 C9 FAD sing 182 n y C8M HM81 FAD sing 183 n n C8M HM82 FAD sing 184 n n C8M HM83 FAD sing 185 n n C9 C9A FAD doub 186 n y C9 H9 FAD sing 187 n n C9A N10 FAD sing 188 n n N10 C10 FAD sing 189 n n N10 C1' FAD sing 190 n n C1' C2' FAD sing 191 n n C1' "H1'1" FAD sing 192 n n C1' "H1'2" FAD sing 193 n n C2' O2' FAD sing 194 n n C2' C3' FAD sing 195 n n C2' H2' FAD sing 196 n n O2' HO2' FAD sing 197 n n C3' O3' FAD sing 198 n n C3' C4' FAD sing 199 n n C3' H3' FAD sing 200 n n O3' HO3' FAD sing 201 n n C4' O4' FAD sing 202 n n C4' C5' FAD sing 203 n n C4' H4' FAD sing 204 n n O4' HO4' FAD sing 205 n n C5' O5' FAD sing 206 n n C5' "H5'1" FAD sing 207 n n C5' "H5'2" FAD sing 208 n n O5' P FAD sing 209 n n P O1P FAD doub 210 n n P O2P FAD sing 211 n n P O3P FAD sing 212 n n O2P HOP2 FAD sing 213 n n # _atom_sites.entry_id 4KW5 _atom_sites.fract_transf_matrix[1][1] 0.012783 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003081 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011878 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012691 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 501 900 FAD FAD . D 3 1W6 A 1 502 1 1W6 CTV . E 4 GOL A 1 503 103 GOL GOL . F 5 IMD A 1 504 104 IMD IMD . G 2 FAD B 1 501 900 FAD FAD . H 3 1W6 B 1 502 1 1W6 CTV . I 4 GOL B 1 503 101 GOL GOL . J 4 GOL B 1 504 102 GOL GOL . K 6 HOH A 1 601 2 HOH HOH . K 6 HOH A 2 602 3 HOH HOH . K 6 HOH A 3 603 5 HOH HOH . K 6 HOH A 4 604 6 HOH HOH . K 6 HOH A 5 605 8 HOH HOH . K 6 HOH A 6 606 9 HOH HOH . K 6 HOH A 7 607 12 HOH HOH . K 6 HOH A 8 608 13 HOH HOH . K 6 HOH A 9 609 15 HOH HOH . K 6 HOH A 10 610 17 HOH HOH . K 6 HOH A 11 611 24 HOH HOH . K 6 HOH A 12 612 26 HOH HOH . K 6 HOH A 13 613 27 HOH HOH . K 6 HOH A 14 614 28 HOH HOH . K 6 HOH A 15 615 29 HOH HOH . K 6 HOH A 16 616 30 HOH HOH . K 6 HOH A 17 617 31 HOH HOH . K 6 HOH A 18 618 32 HOH HOH . K 6 HOH A 19 619 33 HOH HOH . K 6 HOH A 20 620 34 HOH HOH . K 6 HOH A 21 621 35 HOH HOH . K 6 HOH A 22 622 36 HOH HOH . K 6 HOH A 23 623 37 HOH HOH . K 6 HOH A 24 624 38 HOH HOH . K 6 HOH A 25 625 39 HOH HOH . L 6 HOH B 1 601 1 HOH HOH . L 6 HOH B 2 602 4 HOH HOH . L 6 HOH B 3 603 7 HOH HOH . L 6 HOH B 4 604 10 HOH HOH . L 6 HOH B 5 605 11 HOH HOH . L 6 HOH B 6 606 14 HOH HOH . L 6 HOH B 7 607 16 HOH HOH . L 6 HOH B 8 608 18 HOH HOH . L 6 HOH B 9 609 19 HOH HOH . L 6 HOH B 10 610 20 HOH HOH . L 6 HOH B 11 611 21 HOH HOH . L 6 HOH B 12 612 22 HOH HOH . L 6 HOH B 13 613 23 HOH HOH . L 6 HOH B 14 614 25 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . C 2 3.274 -7.542 41.36 1 36.35 ? PA FAD 501 A 1 HETATM 2 O O1A FAD . . . C 2 4.042 -8.605 42.102 1 36.24 ? O1A FAD 501 A 1 HETATM 3 O O2A FAD . . . C 2 1.786 -7.395 41.527 1 30.92 ? O2A FAD 501 A 1 HETATM 4 O O5B FAD . . . C 2 3.938 -6.127 41.682 1 31.76 ? O5B FAD 501 A 1 HETATM 5 C C5B FAD . . . C 2 5.341 -6.022 41.497 1 35.81 ? C5B FAD 501 A 1 HETATM 6 C C4B FAD . . . C 2 5.732 -4.563 41.393 1 35.13 ? C4B FAD 501 A 1 HETATM 7 O O4B FAD . . . C 2 5.188 -4.031 40.184 1 37.79 ? O4B FAD 501 A 1 HETATM 8 C C3B FAD . . . C 2 5.178 -3.71 42.528 1 33.94 ? C3B FAD 501 A 1 HETATM 9 O O3B FAD . . . C 2 6.123 -2.674 42.822 1 32.87 ? O3B FAD 501 A 1 HETATM 10 C C2B FAD . . . C 2 3.983 -3.036 41.92 1 40.13 ? C2B FAD 501 A 1 HETATM 11 O O2B FAD . . . C 2 3.718 -1.78 42.552 1 41.5 ? O2B FAD 501 A 1 HETATM 12 C C1B FAD . . . C 2 4.479 -2.835 40.497 1 37.16 ? C1B FAD 501 A 1 HETATM 13 N N9A FAD . . . C 2 3.357 -2.64 39.564 1 40.35 ? N9A FAD 501 A 1 HETATM 14 C C8A FAD . . . C 2 2.526 -3.596 39.146 1 45.3 ? C8A FAD 501 A 1 HETATM 15 N N7A FAD . . . C 2 1.627 -3.035 38.313 1 47.24 ? N7A FAD 501 A 1 HETATM 16 C C5A FAD . . . C 2 1.895 -1.716 38.219 1 43.66 ? C5A FAD 501 A 1 HETATM 17 C C6A FAD . . . C 2 1.324 -0.661 37.501 1 43.62 ? C6A FAD 501 A 1 HETATM 18 N N6A FAD . . . C 2 0.248 -0.882 36.708 1 32.04 ? N6A FAD 501 A 1 HETATM 19 N N1A FAD . . . C 2 1.85 0.579 37.607 1 34.65 ? N1A FAD 501 A 1 HETATM 20 C C2A FAD . . . C 2 2.916 0.776 38.4 1 35.52 ? C2A FAD 501 A 1 HETATM 21 N N3A FAD . . . C 2 3.491 -0.223 39.095 1 29.26 ? N3A FAD 501 A 1 HETATM 22 C C4A FAD . . . C 2 2.994 -1.477 39.019 1 37.26 ? C4A FAD 501 A 1 HETATM 23 N N1 FAD . . . C 2 11.564 -11.84 37.39 1 16.1 ? N1 FAD 501 A 1 HETATM 24 C C2 FAD . . . C 2 12.545 -11.709 36.471 1 30.21 ? C2 FAD 501 A 1 HETATM 25 O O2 FAD . . . C 2 13.051 -10.481 36.245 1 42.18 ? O2 FAD 501 A 1 HETATM 26 N N3 FAD . . . C 2 13.03 -12.778 35.779 1 35.11 ? N3 FAD 501 A 1 HETATM 27 C C4 FAD . . . C 2 12.535 -14.025 35.979 1 9.67 ? C4 FAD 501 A 1 HETATM 28 O O4 FAD . . . C 2 13.001 -15.097 35.304 1 52.87 ? O4 FAD 501 A 1 HETATM 29 C C4X FAD . . . C 2 11.475 -14.21 36.98 1 21.41 ? C4X FAD 501 A 1 HETATM 30 N N5 FAD . . . C 2 10.97 -15.443 37.198 1 26.5 ? N5 FAD 501 A 1 HETATM 31 C C5X FAD . . . C 2 9.974 -15.612 38.106 1 35.78 ? C5X FAD 501 A 1 HETATM 32 C C6 FAD . . . C 2 9.434 -16.868 38.347 1 23.11 ? C6 FAD 501 A 1 HETATM 33 C C7 FAD . . . C 2 8.422 -17.015 39.291 1 24.06 ? C7 FAD 501 A 1 HETATM 34 C C7M FAD . . . C 2 7.824 -18.358 39.581 1 29.81 ? C7M FAD 501 A 1 HETATM 35 C C8 FAD . . . C 2 7.898 -15.85 40.03 1 32.11 ? C8 FAD 501 A 1 HETATM 36 C C8M FAD . . . C 2 6.795 -16.049 41.033 1 31.58 ? C8M FAD 501 A 1 HETATM 37 C C9 FAD . . . C 2 8.425 -14.587 39.788 1 30.39 ? C9 FAD 501 A 1 HETATM 38 C C9A FAD . . . C 2 9.446 -14.441 38.855 1 21.96 ? C9A FAD 501 A 1 HETATM 39 N N10 FAD . . . C 2 9.99 -13.177 38.595 1 27.97 ? N10 FAD 501 A 1 HETATM 40 C C10 FAD . . . C 2 11.023 -13.066 37.651 1 35 ? C10 FAD 501 A 1 HETATM 41 C C1' FAD . . . C 2 9.513 -11.984 39.3 1 31.15 ? C1' FAD 501 A 1 HETATM 42 C C2' FAD . . . C 2 8.425 -11.25 38.526 1 34.72 ? C2' FAD 501 A 1 HETATM 43 O O2' FAD . . . C 2 8.748 -11.174 37.138 1 50.58 ? O2' FAD 501 A 1 HETATM 44 C C3' FAD . . . C 2 8.337 -9.828 39.033 1 48.78 ? C3' FAD 501 A 1 HETATM 45 O O3' FAD . . . C 2 8.235 -9.831 40.469 1 43.52 ? O3' FAD 501 A 1 HETATM 46 C C4' FAD . . . C 2 7.175 -9.095 38.375 1 35.13 ? C4' FAD 501 A 1 HETATM 47 O O4' FAD . . . C 2 7.262 -7.721 38.783 1 30.48 ? O4' FAD 501 A 1 HETATM 48 C C5' FAD . . . C 2 5.824 -9.737 38.739 1 22.99 ? C5' FAD 501 A 1 HETATM 49 O O5' FAD . . . C 2 4.743 -9.087 38.067 1 38.15 ? O5' FAD 501 A 1 HETATM 50 P P FAD . . . C 2 3.332 -8.821 38.776 1 33.48 ? P FAD 501 A 1 HETATM 51 O O1P FAD . . . C 2 2.336 -8.228 37.816 1 43.58 ? O1P FAD 501 A 1 HETATM 52 O O2P FAD . . . C 2 2.96 -10.094 39.494 1 35.01 ? O2P FAD 501 A 1 HETATM 53 O O3P FAD . . . C 2 3.682 -7.627 39.797 1 53.1 ? O3P FAD 501 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 53 #