data_4KW5 # _model_server_result.job_id tWyb5B2a6sGk0TR2dkDmUg _model_server_result.datetime_utc '2024-11-15 04:12:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4kw5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":504}' # _entry.id 4KW5 # _exptl.entry_id 4KW5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.55 _cell.angle_gamma 90 _cell.entry_id 4KW5 _cell.length_a 78.23 _cell.length_b 84.19 _cell.length_c 81.05 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4KW5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1 B,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 317 n y N1 C5 IMD sing 318 n y N1 HN1 IMD sing 319 n n C2 N3 IMD doub 320 n y C2 H2 IMD sing 321 n n N3 C4 IMD sing 322 n y N3 HN3 IMD sing 323 n n C4 C5 IMD doub 324 n y C4 H4 IMD sing 325 n n C5 H5 IMD sing 326 n n # _atom_sites.entry_id 4KW5 _atom_sites.fract_transf_matrix[1][1] 0.012783 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003081 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011878 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012691 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 501 900 FAD FAD . D 3 1W6 A 1 502 1 1W6 CTV . E 4 GOL A 1 503 103 GOL GOL . F 5 IMD A 1 504 104 IMD IMD . G 2 FAD B 1 501 900 FAD FAD . H 3 1W6 B 1 502 1 1W6 CTV . I 4 GOL B 1 503 101 GOL GOL . J 4 GOL B 1 504 102 GOL GOL . K 6 HOH A 1 601 2 HOH HOH . K 6 HOH A 2 602 3 HOH HOH . K 6 HOH A 3 603 5 HOH HOH . K 6 HOH A 4 604 6 HOH HOH . K 6 HOH A 5 605 8 HOH HOH . K 6 HOH A 6 606 9 HOH HOH . K 6 HOH A 7 607 12 HOH HOH . K 6 HOH A 8 608 13 HOH HOH . K 6 HOH A 9 609 15 HOH HOH . K 6 HOH A 10 610 17 HOH HOH . K 6 HOH A 11 611 24 HOH HOH . K 6 HOH A 12 612 26 HOH HOH . K 6 HOH A 13 613 27 HOH HOH . K 6 HOH A 14 614 28 HOH HOH . K 6 HOH A 15 615 29 HOH HOH . K 6 HOH A 16 616 30 HOH HOH . K 6 HOH A 17 617 31 HOH HOH . K 6 HOH A 18 618 32 HOH HOH . K 6 HOH A 19 619 33 HOH HOH . K 6 HOH A 20 620 34 HOH HOH . K 6 HOH A 21 621 35 HOH HOH . K 6 HOH A 22 622 36 HOH HOH . K 6 HOH A 23 623 37 HOH HOH . K 6 HOH A 24 624 38 HOH HOH . K 6 HOH A 25 625 39 HOH HOH . L 6 HOH B 1 601 1 HOH HOH . L 6 HOH B 2 602 4 HOH HOH . L 6 HOH B 3 603 7 HOH HOH . L 6 HOH B 4 604 10 HOH HOH . L 6 HOH B 5 605 11 HOH HOH . L 6 HOH B 6 606 14 HOH HOH . L 6 HOH B 7 607 16 HOH HOH . L 6 HOH B 8 608 18 HOH HOH . L 6 HOH B 9 609 19 HOH HOH . L 6 HOH B 10 610 20 HOH HOH . L 6 HOH B 11 611 21 HOH HOH . L 6 HOH B 12 612 22 HOH HOH . L 6 HOH B 13 613 23 HOH HOH . L 6 HOH B 14 614 25 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . F 5 -2.545 0.045 13.317 1 64.39 ? N1 IMD 504 A 1 HETATM 2 C C2 IMD . . . F 5 -3.904 0.122 13.362 1 50.64 ? C2 IMD 504 A 1 HETATM 3 N N3 IMD . . . F 5 -4.303 0.132 14.655 1 49.87 ? N3 IMD 504 A 1 HETATM 4 C C4 IMD . . . F 5 -3.181 0.069 15.413 1 45.84 ? C4 IMD 504 A 1 HETATM 5 C C5 IMD . . . F 5 -2.065 0.016 14.579 1 38.93 ? C5 IMD 504 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #