data_4KWA # _model_server_result.job_id OO8_apOSXo93FRj8I-7NQw _model_server_result.datetime_utc '2024-10-18 17:27:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4kwa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":303}' # _entry.id 4KWA # _exptl.entry_id 4KWA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 104.171 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHOLINE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4KWA _cell.length_a 42.901 _cell.length_b 77.355 _cell.length_c 109.83 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4KWA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 131 A ALA 223 1_555 A N MSE 132 A MSE 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale2 A C MSE 132 A MSE 224 1_555 A N THR 133 A THR 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale3 A SG CYS 173 A CYS 265 1_555 C S2 BME . A BME 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? covale ? covale4 A C HIS 177 A HIS 269 1_555 A N MSE 178 A MSE 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 A C MSE 178 A MSE 270 1_555 A N ARG 179 A ARG 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? covale ? covale6 B C ALA 131 B ALA 223 1_555 B N MSE 132 B MSE 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale7 B C MSE 132 B MSE 224 1_555 B N THR 133 B THR 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale8 B SG CYS 173 B CYS 265 1_555 F S2 BME . B BME 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? covale ? covale9 B C HIS 177 B HIS 269 1_555 B N MSE 178 B MSE 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? covale ? covale10 B C MSE 178 B MSE 270 1_555 B N ARG 179 B ARG 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? # _chem_comp.formula 'C5 H14 N O 1' _chem_comp.formula_weight 104.171 _chem_comp.id CHT _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLINE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C5 CHT sing 79 n n C4 O6 CHT sing 80 n n C4 HC41 CHT sing 81 n n C4 HC42 CHT sing 82 n n C5 N1 CHT sing 83 n n C5 HC51 CHT sing 84 n n C5 HC52 CHT sing 85 n n C6 N1 CHT sing 86 n n C6 H61 CHT sing 87 n n C6 H62 CHT sing 88 n n C6 H63 CHT sing 89 n n C7 N1 CHT sing 90 n n C7 H71 CHT sing 91 n n C7 H72 CHT sing 92 n n C7 H73 CHT sing 93 n n C8 N1 CHT sing 94 n n C8 H81 CHT sing 95 n n C8 H82 CHT sing 96 n n C8 H83 CHT sing 97 n n O6 HO6 CHT sing 98 n n # _atom_sites.entry_id 4KWA _atom_sites.fract_transf_matrix[1][1] 0.023309 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012927 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009105 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BME A 1 301 301 BME BME . D 3 EDO A 1 302 304 EDO EDO . E 4 CHT A 1 303 1 CHT CHT . F 2 BME B 1 301 302 BME BME . G 4 CHT B 1 302 2 CHT CHT . H 5 HOH A 1 401 4 HOH HOH . H 5 HOH A 2 402 5 HOH HOH . H 5 HOH A 3 403 7 HOH HOH . H 5 HOH A 4 404 9 HOH HOH . H 5 HOH A 5 405 10 HOH HOH . H 5 HOH A 6 406 12 HOH HOH . H 5 HOH A 7 407 14 HOH HOH . H 5 HOH A 8 408 15 HOH HOH . H 5 HOH A 9 409 16 HOH HOH . H 5 HOH A 10 410 17 HOH HOH . H 5 HOH A 11 411 18 HOH HOH . H 5 HOH A 12 412 22 HOH HOH . H 5 HOH A 13 413 23 HOH HOH . H 5 HOH A 14 414 24 HOH HOH . H 5 HOH A 15 415 25 HOH HOH . H 5 HOH A 16 416 28 HOH HOH . H 5 HOH A 17 417 29 HOH HOH . H 5 HOH A 18 418 31 HOH HOH . H 5 HOH A 19 419 35 HOH HOH . H 5 HOH A 20 420 36 HOH HOH . H 5 HOH A 21 421 38 HOH HOH . H 5 HOH A 22 422 41 HOH HOH . H 5 HOH A 23 423 42 HOH HOH . H 5 HOH A 24 424 43 HOH HOH . H 5 HOH A 25 425 44 HOH HOH . H 5 HOH A 26 426 47 HOH HOH . H 5 HOH A 27 427 48 HOH HOH . H 5 HOH A 28 428 50 HOH HOH . H 5 HOH A 29 429 51 HOH HOH . H 5 HOH A 30 430 53 HOH HOH . H 5 HOH A 31 431 58 HOH HOH . H 5 HOH A 32 432 61 HOH HOH . H 5 HOH A 33 433 62 HOH HOH . H 5 HOH A 34 434 66 HOH HOH . H 5 HOH A 35 435 67 HOH HOH . H 5 HOH A 36 436 69 HOH HOH . H 5 HOH A 37 437 70 HOH HOH . H 5 HOH A 38 438 71 HOH HOH . H 5 HOH A 39 439 77 HOH HOH . H 5 HOH A 40 440 78 HOH HOH . H 5 HOH A 41 441 79 HOH HOH . H 5 HOH A 42 442 82 HOH HOH . H 5 HOH A 43 443 83 HOH HOH . H 5 HOH A 44 444 84 HOH HOH . H 5 HOH A 45 445 86 HOH HOH . H 5 HOH A 46 446 87 HOH HOH . H 5 HOH A 47 447 89 HOH HOH . H 5 HOH A 48 448 90 HOH HOH . H 5 HOH A 49 449 91 HOH HOH . H 5 HOH A 50 450 92 HOH HOH . H 5 HOH A 51 451 94 HOH HOH . H 5 HOH A 52 452 95 HOH HOH . H 5 HOH A 53 453 97 HOH HOH . H 5 HOH A 54 454 100 HOH HOH . H 5 HOH A 55 455 101 HOH HOH . H 5 HOH A 56 456 103 HOH HOH . H 5 HOH A 57 457 104 HOH HOH . H 5 HOH A 58 458 111 HOH HOH . H 5 HOH A 59 459 112 HOH HOH . H 5 HOH A 60 460 114 HOH HOH . H 5 HOH A 61 461 118 HOH HOH . H 5 HOH A 62 462 120 HOH HOH . H 5 HOH A 63 463 124 HOH HOH . H 5 HOH A 64 464 128 HOH HOH . H 5 HOH A 65 465 129 HOH HOH . H 5 HOH A 66 466 134 HOH HOH . H 5 HOH A 67 467 141 HOH HOH . H 5 HOH A 68 468 142 HOH HOH . H 5 HOH A 69 469 143 HOH HOH . H 5 HOH A 70 470 144 HOH HOH . H 5 HOH A 71 471 145 HOH HOH . H 5 HOH A 72 472 146 HOH HOH . H 5 HOH A 73 473 148 HOH HOH . H 5 HOH A 74 474 149 HOH HOH . H 5 HOH A 75 475 150 HOH HOH . H 5 HOH A 76 476 153 HOH HOH . H 5 HOH A 77 477 156 HOH HOH . H 5 HOH A 78 478 157 HOH HOH . H 5 HOH A 79 479 158 HOH HOH . H 5 HOH A 80 480 159 HOH HOH . H 5 HOH A 81 481 160 HOH HOH . H 5 HOH A 82 482 164 HOH HOH . H 5 HOH A 83 483 165 HOH HOH . H 5 HOH A 84 484 166 HOH HOH . H 5 HOH A 85 485 167 HOH HOH . H 5 HOH A 86 486 168 HOH HOH . H 5 HOH A 87 487 170 HOH HOH . H 5 HOH A 88 488 171 HOH HOH . H 5 HOH A 89 489 172 HOH HOH . H 5 HOH A 90 490 180 HOH HOH . H 5 HOH A 91 491 182 HOH HOH . H 5 HOH A 92 492 185 HOH HOH . H 5 HOH A 93 493 186 HOH HOH . H 5 HOH A 94 494 193 HOH HOH . H 5 HOH A 95 495 195 HOH HOH . H 5 HOH A 96 496 199 HOH HOH . H 5 HOH A 97 497 202 HOH HOH . H 5 HOH A 98 498 204 HOH HOH . H 5 HOH A 99 499 205 HOH HOH . H 5 HOH A 100 500 206 HOH HOH . H 5 HOH A 101 501 207 HOH HOH . H 5 HOH A 102 502 212 HOH HOH . H 5 HOH A 103 503 213 HOH HOH . H 5 HOH A 104 504 217 HOH HOH . I 5 HOH B 1 401 1 HOH HOH . I 5 HOH B 2 402 2 HOH HOH . I 5 HOH B 3 403 3 HOH HOH . I 5 HOH B 4 404 6 HOH HOH . I 5 HOH B 5 405 8 HOH HOH . I 5 HOH B 6 406 11 HOH HOH . I 5 HOH B 7 407 13 HOH HOH . I 5 HOH B 8 408 20 HOH HOH . I 5 HOH B 9 409 21 HOH HOH . I 5 HOH B 10 410 26 HOH HOH . I 5 HOH B 11 411 27 HOH HOH . I 5 HOH B 12 412 30 HOH HOH . I 5 HOH B 13 413 32 HOH HOH . I 5 HOH B 14 414 33 HOH HOH . I 5 HOH B 15 415 34 HOH HOH . I 5 HOH B 16 416 37 HOH HOH . I 5 HOH B 17 417 40 HOH HOH . I 5 HOH B 18 418 46 HOH HOH . I 5 HOH B 19 419 49 HOH HOH . I 5 HOH B 20 420 52 HOH HOH . I 5 HOH B 21 421 54 HOH HOH . I 5 HOH B 22 422 55 HOH HOH . I 5 HOH B 23 423 56 HOH HOH . I 5 HOH B 24 424 57 HOH HOH . I 5 HOH B 25 425 59 HOH HOH . I 5 HOH B 26 426 63 HOH HOH . I 5 HOH B 27 427 64 HOH HOH . I 5 HOH B 28 428 65 HOH HOH . I 5 HOH B 29 429 68 HOH HOH . I 5 HOH B 30 430 73 HOH HOH . I 5 HOH B 31 431 74 HOH HOH . I 5 HOH B 32 432 75 HOH HOH . I 5 HOH B 33 433 76 HOH HOH . I 5 HOH B 34 434 80 HOH HOH . I 5 HOH B 35 435 81 HOH HOH . I 5 HOH B 36 436 85 HOH HOH . I 5 HOH B 37 437 88 HOH HOH . I 5 HOH B 38 438 93 HOH HOH . I 5 HOH B 39 439 96 HOH HOH . I 5 HOH B 40 440 98 HOH HOH . I 5 HOH B 41 441 99 HOH HOH . I 5 HOH B 42 442 107 HOH HOH . I 5 HOH B 43 443 108 HOH HOH . I 5 HOH B 44 444 110 HOH HOH . I 5 HOH B 45 445 115 HOH HOH . I 5 HOH B 46 446 117 HOH HOH . I 5 HOH B 47 447 119 HOH HOH . I 5 HOH B 48 448 125 HOH HOH . I 5 HOH B 49 449 126 HOH HOH . I 5 HOH B 50 450 127 HOH HOH . I 5 HOH B 51 451 130 HOH HOH . I 5 HOH B 52 452 131 HOH HOH . I 5 HOH B 53 453 132 HOH HOH . I 5 HOH B 54 454 135 HOH HOH . I 5 HOH B 55 455 137 HOH HOH . I 5 HOH B 56 456 139 HOH HOH . I 5 HOH B 57 457 147 HOH HOH . I 5 HOH B 58 458 151 HOH HOH . I 5 HOH B 59 459 152 HOH HOH . I 5 HOH B 60 460 163 HOH HOH . I 5 HOH B 61 461 169 HOH HOH . I 5 HOH B 62 462 173 HOH HOH . I 5 HOH B 63 463 175 HOH HOH . I 5 HOH B 64 464 176 HOH HOH . I 5 HOH B 65 465 179 HOH HOH . I 5 HOH B 66 466 181 HOH HOH . I 5 HOH B 67 467 183 HOH HOH . I 5 HOH B 68 468 188 HOH HOH . I 5 HOH B 69 469 189 HOH HOH . I 5 HOH B 70 470 190 HOH HOH . I 5 HOH B 71 471 191 HOH HOH . I 5 HOH B 72 472 192 HOH HOH . I 5 HOH B 73 473 194 HOH HOH . I 5 HOH B 74 474 196 HOH HOH . I 5 HOH B 75 475 203 HOH HOH . I 5 HOH B 76 476 208 HOH HOH . I 5 HOH B 77 477 209 HOH HOH . I 5 HOH B 78 478 211 HOH HOH . I 5 HOH B 79 479 214 HOH HOH . I 5 HOH B 80 480 218 HOH HOH . I 5 HOH B 81 481 219 HOH HOH . I 5 HOH B 82 482 220 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 CHT . . . E 4 -12.477 4.016 -11.973 1 66.8 ? C4 CHT 303 A 1 HETATM 2 C C5 CHT . . . E 4 -12.866 5.487 -12.13 1 47.08 ? C5 CHT 303 A 1 HETATM 3 C C6 CHT . . . E 4 -15.257 4.995 -12.55 1 47.78 ? C6 CHT 303 A 1 HETATM 4 C C7 CHT . . . E 4 -14.47 7.24 -12.399 1 57 ? C7 CHT 303 A 1 HETATM 5 C C8 CHT . . . E 4 -14.557 5.773 -10.409 1 49.8 ? C8 CHT 303 A 1 HETATM 6 O O6 CHT . . . E 4 -11.259 3.839 -12.713 1 67.6 ? O6 CHT 303 A 1 HETATM 7 N N1 CHT . . . E 4 -14.284 5.859 -11.862 1 50.82 ? N1 CHT 303 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #